RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 KIF28PB7ZC32 967 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 M0R296 226 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 SEC24BO95487 1268 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 RHBDL3P58872 404 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 RAB3GAP1Q15042 981 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 CATSPERGQ6ZRH7 1159 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 RPUSD2Q8IZ73 545 aaKnown RBP4.06□□□□□ -1.76
CHD1-211ENST00000514344 ADSSL1Q8N142 457 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 FBXL6Q8N531 539 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 EDAQ92838 391 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 TSR2Q969E8 191 aaKnown RBP4.06□□□□□ -1.76
CHD1-211ENST00000514344 TINF2Q9BSI4 451 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 TSEN34Q9BSV6 310 aaKnown RBP4.06□□□□□ -1.76
CHD1-211ENST00000514344 TRIM34Q9BYJ4 488 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 KRTAP3-3Q9BYR6 98 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 KRTAP3-2Q9BYR7 98 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 SPATC1LQ9H0A9 340 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 TRPV6Q9H1D0 765 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 DNAJC18Q9H819 358 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 ALG13Q9NP73 1137 aaKnown RBP4.06□□□□□ -1.76
CHD1-211ENST00000514344 ZHX1Q9UKY1 873 aaPredicted RBP4.06□□□□□ -1.76
CHD1-211ENST00000514344 ZBTB21Q9ULJ3 1066 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 CNPY2Q9Y2B0 182 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 ELP1O95163 1332 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 ZFYVE26Q68DK2 2539 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 SCN5AQ14524 2016 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 GH2P01242 217 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 ZNF853P0CG23 659 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 GNAI1P63096 354 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 HERC4Q5GLZ8 1057 aaPredicted RBP4.05□□□□□ -1.76
CHD1-211ENST00000514344 USP17L2Q6R6M4 530 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 CXCL17Q6UXB2 119 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 TRIM67Q6ZTA4 783 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 ADHFE1Q8IWW8 467 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 VWCEQ96DN2 955 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 SUCLG2Q96I99 432 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 RPAP3Q9H6T3 665 aaPredicted RBP4.05□□□□□ -1.76
CHD1-211ENST00000514344 HERC5Q9UII4 1024 aaKnown RBP4.05□□□□□ -1.76
CHD1-211ENST00000514344 CDK5RAP2Q96SN8 1893 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 SMG1Q96Q15 3661 aaKnown RBP4.05□□□□□ -1.76
CHD1-211ENST00000514344 ADCY6O43306 1168 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 CD4P01730 458 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 ZNF865P0CJ78 1059 aaPredicted RBP4.05□□□□□ -1.76
CHD1-211ENST00000514344 FCER1AP12319 257 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 PHKA1P46020 1223 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 BEX3Q00994 111 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 CCSAPQ6IQ19 270 aaPredicted RBP4.05□□□□□ -1.76
CHD1-211ENST00000514344 SLC4A10Q6U841 1118 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 LBX2Q6XYB7 198 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 HERC6Q8IVU3 1022 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 KLHDC9Q8NEP7 349 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 NEK9Q8TD19 979 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 RNF166Q96A37 237 aaPredicted RBP4.05□□□□□ -1.76
CHD1-211ENST00000514344 ZBED2Q9BTP6 218 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 NOC4LQ9BVI4 516 aaKnown RBP4.05□□□□□ -1.76
CHD1-211ENST00000514344 TANGO6Q9C0B7 1094 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 IFT57Q9NWB7 429 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 PI4KBQ9UBF8 816 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 PALD1Q9ULE6 856 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 MROH7-TTC4A0A0A0MT08 1334 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 KMT2EQ8IZD2 1858 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 B4GALT4O60513 344 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 CSPG5O95196 566 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 NBPF7P0C2Y1 421 aaPredicted RBP4.05□□□□□ -1.76
CHD1-211ENST00000514344 FGFR2P21802 821 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 AVPR2P30518 371 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 MECOMQ03112 1051 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 BEND3Q5T5X7 828 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 FAM117BQ6P1L5 589 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 BMP8AQ7Z5Y6 402 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 PCSK9Q8NBP7 692 aaKnown RBP4.05□□□□□ -1.76
CHD1-211ENST00000514344 ACER1Q8TDN7 264 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 LPIN2Q92539 896 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 NKD2Q969F2 451 aaPredicted RBP4.05□□□□□ -1.76
CHD1-211ENST00000514344 MARVELD3Q96A59 401 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 KAZALD1Q96I82 304 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 FTOQ9C0B1 505 aaKnown RBP eCLIP4.05□□□□□ -1.76
CHD1-211ENST00000514344 BICC1Q9H694 974 aaKnown RBP4.05□□□□□ -1.76
CHD1-211ENST00000514344 CLDND1Q9NY35 253 aa4.05□□□□□ -1.76
CHD1-211ENST00000514344 ZNFX1Q9P2E3 1918 aaKnown RBP4.04□□□□□ -1.76
CHD1-211ENST00000514344 BPTFQ12830 3046 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 TET1Q8NFU7 2136 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 CYP2C9P11712 490 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 TWISTNBQ3B726 338 aaPredicted RBP4.04□□□□□ -1.76
CHD1-211ENST00000514344 NOL8Q76FK4 1167 aaKnown RBP4.04□□□□□ -1.76
CHD1-211ENST00000514344 FRMD5Q7Z6J6 570 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 SLF2Q8IX21 1173 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 TEX11Q8IYF3 940 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 SHCBP1Q8NEM2 672 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 RUNDC1Q96C34 613 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 SLC9A7Q96T83 725 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 CHMP4AQ9BY43 222 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 SPC25Q9HBM1 224 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 GNL3LQ9NVN8 582 aaKnown RBP4.04□□□□□ -1.76
CHD1-211ENST00000514344 PRKAG3Q9UGI9 489 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 FAM50BQ9Y247 325 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 CLSPNQ9HAW4 1339 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 GPR75-ASB3A0A0A6YYF3 556 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 PROB1E7EW31 1015 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 PDGFBP01127 241 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms