RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CNNM3Q8NE01 707 aa17.06■□□□□ 0.32
VCAN-211ENST00000513984 AGBL3Q8NEM8 1001 aa17.06■□□□□ 0.32
VCAN-211ENST00000513984 RASGRP4Q8TDF6 673 aa17.06■□□□□ 0.32
VCAN-211ENST00000513984 NAT10Q9H0A0 1025 aaKnown RBP17.06■□□□□ 0.32
VCAN-211ENST00000513984 KANSL2Q9H9L4 492 aa17.06■□□□□ 0.32
VCAN-211ENST00000513984 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
VCAN-211ENST00000513984 A0A087WWV3 80 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 GNA11P29992 359 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 DALRD3Q5D0E6 543 aaKnown RBP17.05■□□□□ 0.32
VCAN-211ENST00000513984 ARL6IP4Q66PJ3 421 aaKnown RBP17.05■□□□□ 0.32
VCAN-211ENST00000513984 ZSCAN30Q86W11 494 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 OGFOD1Q8N543 542 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 MTMR14Q8NCE2 650 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 BPIFA3Q9BQP9 254 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 C6orf50Q9HD87 102 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 POLR2DO15514 142 aaKnown RBP17.05■□□□□ 0.32
VCAN-211ENST00000513984 PLCB2Q00722 1185 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 MDM2Q00987 491 aaPredicted RBP17.05■□□□□ 0.32
VCAN-211ENST00000513984 PNOCQ13519 176 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 DLGAP5Q15398 846 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 DPCR1Q3MIW9 517 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 USP49Q70CQ1 688 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 DHX40Q8IX18 779 aaKnown RBP17.05■□□□□ 0.32
VCAN-211ENST00000513984 C4orf32Q8N8J7 132 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 VAT1LQ9HCJ6 419 aa17.05■□□□□ 0.32
VCAN-211ENST00000513984 HOOK1Q9UJC3 728 aaKnown RBP17.05■□□□□ 0.32
VCAN-211ENST00000513984 SMCO2A6NFE2 343 aa17.04■□□□□ 0.32
VCAN-211ENST00000513984 ACTN4O43707 911 aaKnown RBP17.04■□□□□ 0.32
VCAN-211ENST00000513984 EEF2P13639 858 aaKnown RBP17.04■□□□□ 0.32
VCAN-211ENST00000513984 MCM7P33993 719 aa17.04■□□□□ 0.32
VCAN-211ENST00000513984 SPDYE2Q495Y8 402 aa17.04■□□□□ 0.32
VCAN-211ENST00000513984 KRT25Q7Z3Z0 450 aa17.04■□□□□ 0.32
VCAN-211ENST00000513984 CSRNP1Q96S65 589 aa17.04■□□□□ 0.32
VCAN-211ENST00000513984 GPCPD1Q9NPB8 672 aa17.04■□□□□ 0.32
VCAN-211ENST00000513984 ZNF70Q9UC06 446 aaPredicted RBP17.04■□□□□ 0.32
VCAN-211ENST00000513984 HERC5Q9UII4 1024 aaKnown RBP17.04■□□□□ 0.32
VCAN-211ENST00000513984 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
VCAN-211ENST00000513984 GOLGA6L19H0YKK7 550 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 ATP2B2Q01814 1243 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 ABCB5Q2M3G0 1257 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 SHROOM1Q2M3G4 852 aaPredicted RBP17.03■□□□□ 0.32
VCAN-211ENST00000513984 FKBP1CQ5VVH2 108 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 KANK3Q6NY19 840 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 PPP1R18Q6NYC8 613 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 SARM1Q6SZW1 724 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 DCAF4Q8WV16 495 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 SYMPKQ92797 1274 aaKnown RBP17.03■□□□□ 0.32
VCAN-211ENST00000513984 MTMR8Q96EF0 704 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 TAOK3Q9H2K8 898 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 JMJD4Q9H9V9 463 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 SERTAD1Q9UHV2 236 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 PNMA6FA0A0J9YX94 578 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 ICA1Q05084 483 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 CXCL9Q07325 125 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 SEPT2Q15019 361 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 INF2Q27J81 1249 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 CCDC96Q2M329 555 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 SIAH1Q8IUQ4 282 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 ADGRF4Q8IZF3 695 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 FAM151AQ8WW52 585 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 EPSTI1Q96J88 318 aa17.03■□□□□ 0.32
VCAN-211ENST00000513984 CNTNAP1P78357 1384 aa17.02■□□□□ 0.32
VCAN-211ENST00000513984 MYH7BA7E2Y1 1941 aa17.02■□□□□ 0.32
VCAN-211ENST00000513984 ATAD5Q96QE3 1844 aa17.02■□□□□ 0.32
VCAN-211ENST00000513984 VWA3AA6NCI4 1184 aa17.02■□□□□ 0.31
VCAN-211ENST00000513984 BECN2A8MW95 431 aa17.02■□□□□ 0.31
VCAN-211ENST00000513984 TCP10L2B9ZVM9 353 aa17.02■□□□□ 0.31
VCAN-211ENST00000513984 BIN1O00499 593 aa17.02■□□□□ 0.31
VCAN-211ENST00000513984 PTMAP06454 111 aaKnown RBP17.02■□□□□ 0.31
VCAN-211ENST00000513984 POSTNQ15063 836 aa17.02■□□□□ 0.31
VCAN-211ENST00000513984 NONOQ15233 471 aaKnown RBP eCLIP17.02■□□□□ 0.31
VCAN-211ENST00000513984 NT5DC1Q5TFE4 455 aa17.02■□□□□ 0.31
VCAN-211ENST00000513984 TTBK2Q6IQ55 1244 aa17.02■□□□□ 0.31
VCAN-211ENST00000513984 PLA2G4DQ86XP0 818 aa17.02■□□□□ 0.31
VCAN-211ENST00000513984 ZBED3Q96IU2 234 aaPredicted RBP17.02■□□□□ 0.31
VCAN-211ENST00000513984 SGIP1Q9BQI5 828 aa17.02■□□□□ 0.31
VCAN-211ENST00000513984 A0A087X0B3 334 aa17.01■□□□□ 0.31
VCAN-211ENST00000513984 CLRN2A0PK11 232 aa17.01■□□□□ 0.31
VCAN-211ENST00000513984 LAD1O00515 517 aa17.01■□□□□ 0.31
VCAN-211ENST00000513984 GDF11O95390 407 aa17.01■□□□□ 0.31
VCAN-211ENST00000513984 IL17AQ16552 155 aa17.01■□□□□ 0.31
VCAN-211ENST00000513984 AOPEPQ8N6M6 819 aa17.01■□□□□ 0.31
VCAN-211ENST00000513984 GMCL1P1Q8NEA9 526 aa17.01■□□□□ 0.31
VCAN-211ENST00000513984 RTN4Q9NQC3 1192 aaKnown RBP17.01■□□□□ 0.31
VCAN-211ENST00000513984 ZKSCAN5Q9Y2L8 839 aa17.01■□□□□ 0.31
VCAN-211ENST00000513984 PCDHA5Q9Y5H7 936 aa17.01■□□□□ 0.31
VCAN-211ENST00000513984 NFKBIEO00221 500 aa17■□□□□ 0.31
VCAN-211ENST00000513984 FOXN1O15353 648 aa17■□□□□ 0.31
VCAN-211ENST00000513984 LONP1P36776 959 aaKnown RBP17■□□□□ 0.31
VCAN-211ENST00000513984 RBM26Q5T8P6 1007 aaKnown RBP17■□□□□ 0.31
VCAN-211ENST00000513984 CIAPIN1Q6FI81 312 aa17■□□□□ 0.31
VCAN-211ENST00000513984 KCTD1Q719H9 257 aa17■□□□□ 0.31
VCAN-211ENST00000513984 REXO1Q8N1G1 1221 aaKnown RBP17■□□□□ 0.31
VCAN-211ENST00000513984 PDILTQ8N807 584 aa17■□□□□ 0.31
VCAN-211ENST00000513984 EIF2AK3Q9NZJ5 1116 aaKnown RBP17■□□□□ 0.31
VCAN-211ENST00000513984 SYNPO2Q9UMS6 1093 aa17■□□□□ 0.31
VCAN-211ENST00000513984 CD2APQ9Y5K6 639 aa17■□□□□ 0.31
VCAN-211ENST00000513984 ZBTB5O15062 677 aa17■□□□□ 0.31
VCAN-211ENST00000513984 SLFN14P0C7P3 912 aa17■□□□□ 0.31
VCAN-211ENST00000513984 CLCN1P35523 988 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms