RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ADAMTS19Q8TE59 1207 aa16.82■□□□□ 0.28
SPCS3-204ENST00000513139 FRAT1Q92837 279 aaPredicted RBP16.82■□□□□ 0.28
SPCS3-204ENST00000513139 PRDM12Q9H4Q4 367 aa16.82■□□□□ 0.28
SPCS3-204ENST00000513139 FAM184BQ9ULE4 1060 aa16.82■□□□□ 0.28
SPCS3-204ENST00000513139 VWA5AO00534 786 aa16.81■□□□□ 0.28
SPCS3-204ENST00000513139 DUSP11O75319 330 aaKnown RBP16.81■□□□□ 0.28
SPCS3-204ENST00000513139 PDE6AP16499 860 aa16.81■□□□□ 0.28
SPCS3-204ENST00000513139 SLC9C2Q5TAH2 1124 aa16.81■□□□□ 0.28
SPCS3-204ENST00000513139 PSRC1Q6PGN9 363 aaPredicted RBP16.81■□□□□ 0.28
SPCS3-204ENST00000513139 MAMDC4Q6UXC1 1216 aa16.81■□□□□ 0.28
SPCS3-204ENST00000513139 TMEM199Q8N511 208 aa16.81■□□□□ 0.28
SPCS3-204ENST00000513139 TMEM57Q8N5G2 664 aa16.81■□□□□ 0.28
SPCS3-204ENST00000513139 PPM1EQ8WY54 764 aa16.81■□□□□ 0.28
SPCS3-204ENST00000513139 LENG1Q96BZ8 264 aaPredicted RBP16.81■□□□□ 0.28
SPCS3-204ENST00000513139 GLT1D1Q96MS3 346 aa16.81■□□□□ 0.28
SPCS3-204ENST00000513139 ZNF214Q9UL59 606 aaPredicted RBP16.81■□□□□ 0.28
SPCS3-204ENST00000513139 MYH7P12883 1935 aa16.8■□□□□ 0.28
SPCS3-204ENST00000513139 AKR1B1P15121 316 aa16.8■□□□□ 0.28
SPCS3-204ENST00000513139 PBX2P40425 430 aa16.8■□□□□ 0.28
SPCS3-204ENST00000513139 RAB30Q15771 203 aa16.8■□□□□ 0.28
SPCS3-204ENST00000513139 CLEC10AQ8IUN9 316 aa16.8■□□□□ 0.28
SPCS3-204ENST00000513139 PLCD3Q8N3E9 789 aa16.8■□□□□ 0.28
SPCS3-204ENST00000513139 PCSK9Q8NBP7 692 aaKnown RBP16.8■□□□□ 0.28
SPCS3-204ENST00000513139 SDR42E1Q8WUS8 393 aa16.8■□□□□ 0.28
SPCS3-204ENST00000513139 UHRF1Q96T88 793 aaPredicted RBP16.8■□□□□ 0.28
SPCS3-204ENST00000513139 RAPGEFL1Q9UHV5 662 aa16.8■□□□□ 0.28
SPCS3-204ENST00000513139 PPP1R9AQ9ULJ8 1098 aa16.8■□□□□ 0.28
SPCS3-204ENST00000513139 GREB1LQ9C091 1923 aaPredicted RBP16.79■□□□□ 0.28
SPCS3-204ENST00000513139 GRXCR1A8MXD5 290 aa16.79■□□□□ 0.28
SPCS3-204ENST00000513139 SNAI1O95863 264 aaPredicted RBP16.79■□□□□ 0.28
SPCS3-204ENST00000513139 CSF2RAP15509 400 aa16.79■□□□□ 0.28
SPCS3-204ENST00000513139 ZNF467Q7Z7K2 595 aaPredicted RBP16.79■□□□□ 0.28
SPCS3-204ENST00000513139 ERC1Q8IUD2 1116 aa16.79■□□□□ 0.28
SPCS3-204ENST00000513139 IL27Q8NEV9 243 aa16.79■□□□□ 0.28
SPCS3-204ENST00000513139 REPS2Q8NFH8 660 aa16.79■□□□□ 0.28
SPCS3-204ENST00000513139 FAM122AQ96E09 287 aa16.79■□□□□ 0.28
SPCS3-204ENST00000513139 KANSL2Q9H9L4 492 aa16.79■□□□□ 0.28
SPCS3-204ENST00000513139 GOPCQ9HD26 462 aa16.79■□□□□ 0.28
SPCS3-204ENST00000513139 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
SPCS3-204ENST00000513139 FBXO28Q9NVF7 368 aa16.79■□□□□ 0.28
SPCS3-204ENST00000513139 MSRAQ9UJ68 235 aa16.79■□□□□ 0.28
SPCS3-204ENST00000513139 ZNF532Q9HCE3 1301 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 DNAJC25-GNG10A0A024R161 153 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 TCRBV5S4A2TA0A5A2 114 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 ARVCFO00192 962 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 CYP2D6P10635 497 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 ADGRE1Q14246 886 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 ZNF365Q70YC5 407 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 AACSQ86V21 672 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 HERVK_113Q902F9 699 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 DYNLL2Q96FJ2 89 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 SPC25Q9HBM1 224 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 MYH4Q9Y623 1939 aa16.78■□□□□ 0.28
SPCS3-204ENST00000513139 A0A0U1RQG5 324 aaPredicted RBP16.77■□□□□ 0.28
SPCS3-204ENST00000513139 TLR3O15455 904 aaKnown RBP16.77■□□□□ 0.28
SPCS3-204ENST00000513139 ASGR1P07306 291 aa16.77■□□□□ 0.28
SPCS3-204ENST00000513139 EEF2P13639 858 aaKnown RBP16.77■□□□□ 0.28
SPCS3-204ENST00000513139 CDK8P49336 464 aa16.77■□□□□ 0.28
SPCS3-204ENST00000513139 LCORLQ8N3X6 602 aa16.77■□□□□ 0.28
SPCS3-204ENST00000513139 DDX11Q96FC9 970 aa16.77■□□□□ 0.28
SPCS3-204ENST00000513139 YTHDC1Q96MU7 727 aaKnown RBP16.77■□□□□ 0.28
SPCS3-204ENST00000513139 TEX13BQ9BXU2 312 aa16.77■□□□□ 0.28
SPCS3-204ENST00000513139 UPF3AQ9H1J1 476 aaKnown RBP16.77■□□□□ 0.28
SPCS3-204ENST00000513139 TSPYL2Q9H2G4 693 aaPredicted RBP16.77■□□□□ 0.28
SPCS3-204ENST00000513139 MTIF3Q9H2K0 278 aaKnown RBP16.77■□□□□ 0.28
SPCS3-204ENST00000513139 IL23AQ9NPF7 189 aa16.77■□□□□ 0.28
SPCS3-204ENST00000513139 RTN4Q9NQC3 1192 aaKnown RBP16.77■□□□□ 0.28
SPCS3-204ENST00000513139 MYADML2A6NDP7 307 aa16.76■□□□□ 0.27
SPCS3-204ENST00000513139 C6orf222P0C671 652 aaPredicted RBP16.76■□□□□ 0.27
SPCS3-204ENST00000513139 IGFBP4P22692 258 aa16.76■□□□□ 0.27
SPCS3-204ENST00000513139 GJA9P57773 515 aa16.76■□□□□ 0.27
SPCS3-204ENST00000513139 CCDC85BQ15834 202 aaPredicted RBP16.76■□□□□ 0.27
SPCS3-204ENST00000513139 C12orf60Q5U649 245 aa16.76■□□□□ 0.27
SPCS3-204ENST00000513139 C16orf86Q6ZW13 317 aa16.76■□□□□ 0.27
SPCS3-204ENST00000513139 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.76■□□□□ 0.27
SPCS3-204ENST00000513139 FAM126BQ8IXS8 530 aa16.76■□□□□ 0.27
SPCS3-204ENST00000513139 AMOTL1Q8IY63 956 aa16.76■□□□□ 0.27
SPCS3-204ENST00000513139 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.76■□□□□ 0.27
SPCS3-204ENST00000513139 VTI1AQ96AJ9 217 aa16.76■□□□□ 0.27
SPCS3-204ENST00000513139 C1QTNF1Q9BXJ1 281 aa16.76■□□□□ 0.27
SPCS3-204ENST00000513139 ABHD16BQ9H3Z7 469 aa16.76■□□□□ 0.27
SPCS3-204ENST00000513139 C1orf115Q9H7X2 142 aa16.76■□□□□ 0.27
SPCS3-204ENST00000513139 SLC28A3Q9HAS3 691 aa16.76■□□□□ 0.27
SPCS3-204ENST00000513139 CXXC1Q9P0U4 656 aaPredicted RBP16.76■□□□□ 0.27
SPCS3-204ENST00000513139 ZHX1Q9UKY1 873 aaPredicted RBP16.76■□□□□ 0.27
SPCS3-204ENST00000513139 ATP2A1O14983 1001 aa16.75■□□□□ 0.27
SPCS3-204ENST00000513139 ACRP10323 421 aa16.75■□□□□ 0.27
SPCS3-204ENST00000513139 NKX3-2P78367 333 aa16.75■□□□□ 0.27
SPCS3-204ENST00000513139 ACVR2BQ13705 512 aa16.75■□□□□ 0.27
SPCS3-204ENST00000513139 FAM83BQ5T0W9 1011 aa16.75■□□□□ 0.27
SPCS3-204ENST00000513139 ARIH1Q9Y4X5 557 aaPredicted RBP16.75■□□□□ 0.27
SPCS3-204ENST00000513139 PRRC2BQ5JSZ5 2229 aaKnown RBP16.75■□□□□ 0.27
SPCS3-204ENST00000513139 CD4P01730 458 aa16.74■□□□□ 0.27
SPCS3-204ENST00000513139 FGBP02675 491 aa16.74■□□□□ 0.27
SPCS3-204ENST00000513139 CCDC144BQ3MJ40 725 aa16.74■□□□□ 0.27
SPCS3-204ENST00000513139 GNASQ5JWF2 1037 aa16.74■□□□□ 0.27
SPCS3-204ENST00000513139 SLF1Q9BQI6 1058 aa16.74■□□□□ 0.27
SPCS3-204ENST00000513139 PPP1R12CQ9BZL4 782 aa16.74■□□□□ 0.27
SPCS3-204ENST00000513139 ARMT1Q9H993 441 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms