RNA–Protein interactions for RNA: ENST00000512517.1

LINC01258-201, Transcript of long intergenic non-protein coding RNA 1258, humanhuman

TSL 2 BASIC

Gene LINC01258, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01258-201ENST00000512517 CDC23Q9UJX2 597 aa9.93□□□□□ -0.82
LINC01258-201ENST00000512517 TPX2Q9ULW0 747 aaKnown RBP9.93□□□□□ -0.82
LINC01258-201ENST00000512517 HPCAL4Q9UM19 191 aa9.93□□□□□ -0.82
LINC01258-201ENST00000512517 PPP2R2CQ9Y2T4 447 aa9.93□□□□□ -0.82
LINC01258-201ENST00000512517 NDUFB9Q9Y6M9 179 aa9.93□□□□□ -0.82
LINC01258-201ENST00000512517 ZNF609O15014 1411 aa9.93□□□□□ -0.82
LINC01258-201ENST00000512517 GOLGA8KD6RF30 607 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 BIN1O00499 593 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 PPP1R12BO60237 982 aaPredicted RBP9.92□□□□□ -0.82
LINC01258-201ENST00000512517 MGRN1O60291 552 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 PDHBP11177 359 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 PDCP20941 246 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 EZH2Q15910 746 aaKnown RBP9.92□□□□□ -0.82
LINC01258-201ENST00000512517 SKIDA1Q1XH10 827 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 RIC1Q4ADV7 1423 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 FAM228AQ86W67 206 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 FUKQ8N0W3 1084 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 FAM163AQ96GL9 167 aaPredicted RBP9.92□□□□□ -0.82
LINC01258-201ENST00000512517 JAKMIP1Q96N16 626 aaKnown RBP9.92□□□□□ -0.82
LINC01258-201ENST00000512517 CDC5LQ99459 802 aaKnown RBP9.92□□□□□ -0.82
LINC01258-201ENST00000512517 SH3GL2Q99962 352 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 YIPF3Q9GZM5 350 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 RIPOR2Q9Y4F9 1068 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 ABLIM1O14639 778 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 CREB3O43889 395 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 RPSAP08865 295 aaKnown RBP9.92□□□□□ -0.82
LINC01258-201ENST00000512517 VSNL1P62760 191 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 STIM1Q13586 685 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 ILDR1Q86SU0 546 aaPredicted RBP9.92□□□□□ -0.82
LINC01258-201ENST00000512517 RASSF8Q8NHQ8 419 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 SPATA32Q96LK8 384 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 ZSCAN31Q96LW9 406 aaPredicted RBP9.92□□□□□ -0.82
LINC01258-201ENST00000512517 WDR24Q96S15 920 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 ARPC5LQ9BPX5 153 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 YIPF2Q9BWQ6 316 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 RTEL1Q9NZ71 1219 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 PALD1Q9ULE6 856 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 C15orf41Q9Y2V0 281 aa9.92□□□□□ -0.82
LINC01258-201ENST00000512517 A6NHS1 94 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 BUB1BO60566 1050 aaPredicted RBP9.91□□□□□ -0.82
LINC01258-201ENST00000512517 TAF5LO75529 589 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 ADORA1P30542 326 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 GJA8P48165 433 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 BLMHQ13867 455 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 MFSD4BQ5TF39 518 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 COL23A1Q86Y22 540 aaPredicted RBP9.91□□□□□ -0.82
LINC01258-201ENST00000512517 KIRREL3Q8IZU9 778 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 P3H4Q92791 437 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 AKT1S1Q96B36 256 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 EDC3Q96F86 508 aaKnown RBP9.91□□□□□ -0.82
LINC01258-201ENST00000512517 ANKRD27Q96NW4 1050 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 FSD1Q9BTV5 496 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 GPR108Q9NPR9 543 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 SH2B1Q9NRF2 756 aaPredicted RBP9.91□□□□□ -0.82
LINC01258-201ENST00000512517 RGPD3A6NKT7 1758 aaPredicted RBP9.91□□□□□ -0.82
LINC01258-201ENST00000512517 RGPD4Q7Z3J3 1758 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 B4DLN1 442 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 CBFA2T2O43439 604 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 E2F6O75461 281 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 GNAT1P11488 350 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 ZNF24P17028 368 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 GJB2P29033 226 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 E2F5Q15329 346 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 WHAMMP3Q1A5X7 153 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 TTC39AQ5SRH9 613 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 RNF187Q5TA31 235 aaPredicted RBP9.91□□□□□ -0.82
LINC01258-201ENST00000512517 AOPEPQ8N6M6 819 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 COG1Q8WTW3 980 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 CCDC12Q8WUD4 166 aaPredicted RBP9.91□□□□□ -0.82
LINC01258-201ENST00000512517 NSMCE1Q8WV22 266 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 CUL5Q93034 780 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 EVI5LQ96CN4 794 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 UPF3BQ9BZI7 483 aaKnown RBP9.91□□□□□ -0.82
LINC01258-201ENST00000512517 UNC45AQ9H3U1 944 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 DNAAF2Q9NVR5 837 aaKnown RBP9.91□□□□□ -0.82
LINC01258-201ENST00000512517 SAMM50Q9Y512 469 aa9.91□□□□□ -0.82
LINC01258-201ENST00000512517 MROH5Q6ZUA9 1318 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 COL4A1P02462 1669 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 TNRC6CQ9HCJ0 1690 aaKnown RBP9.9□□□□□ -0.82
LINC01258-201ENST00000512517 NR1I2O75469 434 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 PDE8BO95263 885 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 SERPINB2P05120 415 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 IBSPP21815 317 aaPredicted RBP9.9□□□□□ -0.82
LINC01258-201ENST00000512517 HSPA4P34932 840 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 USP4Q13107 963 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 MKRN4PQ13434 485 aaPredicted RBP9.9□□□□□ -0.82
LINC01258-201ENST00000512517 SF3B3Q15393 1217 aaKnown RBP9.9□□□□□ -0.82
LINC01258-201ENST00000512517 SLC10A5Q5PT55 438 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 MSL1Q68DK7 614 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 TEX9Q8N6V9 391 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 GBP7Q8N8V2 638 aaPredicted RBP9.9□□□□□ -0.82
LINC01258-201ENST00000512517 TTC14Q96N46 770 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 XPO4Q9C0E2 1151 aaKnown RBP9.9□□□□□ -0.82
LINC01258-201ENST00000512517 SUGCTQ9HAC7 445 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 ANO2Q9NQ90 1003 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 SYNPO2Q9UMS6 1093 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.9□□□□□ -0.82
LINC01258-201ENST00000512517 WDR37Q9Y2I8 494 aa9.9□□□□□ -0.82
LINC01258-201ENST00000512517 ZC3H4Q9UPT8 1303 aaKnown RBP9.9□□□□□ -0.82
LINC01258-201ENST00000512517 CTAGE15A4D2H0 777 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms