RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 LBHD1Q9BQE6 289 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-229ENST00000512418 ZBTB47Q9UFB7 747 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-229ENST00000512418 PRKAG2Q9UGJ0 569 aa17.51■□□□□ 0.39
CCHCR1-229ENST00000512418 SALL3Q9BXA9 1300 aa17.5■□□□□ 0.39
CCHCR1-229ENST00000512418 ZBED4O75132 1171 aa17.5■□□□□ 0.39
CCHCR1-229ENST00000512418 PPARAQ07869 468 aa17.5■□□□□ 0.39
CCHCR1-229ENST00000512418 SNX17Q15036 470 aa17.5■□□□□ 0.39
CCHCR1-229ENST00000512418 SLC39A5Q6ZMH5 540 aa17.5■□□□□ 0.39
CCHCR1-229ENST00000512418 LRRC47Q8N1G4 583 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-229ENST00000512418 MSL3Q8N5Y2 521 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-229ENST00000512418 XPNPEP3Q9NQH7 507 aa17.5■□□□□ 0.39
CCHCR1-229ENST00000512418 FEM1BQ9UK73 627 aa17.5■□□□□ 0.39
CCHCR1-229ENST00000512418 CNPY2Q9Y2B0 182 aa17.5■□□□□ 0.39
CCHCR1-229ENST00000512418 ATP11BQ9Y2G3 1177 aa17.5■□□□□ 0.39
CCHCR1-229ENST00000512418 CTDP1Q9Y5B0 961 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-229ENST00000512418 AKR1A1P14550 325 aa17.49■□□□□ 0.39
CCHCR1-229ENST00000512418 KIFC2Q96AC6 838 aa17.49■□□□□ 0.39
CCHCR1-229ENST00000512418 DDX11Q96FC9 970 aa17.49■□□□□ 0.39
CCHCR1-229ENST00000512418 SLC38A10Q9HBR0 1119 aa17.49■□□□□ 0.39
CCHCR1-229ENST00000512418 RIPK3Q9Y572 518 aa17.49■□□□□ 0.39
CCHCR1-229ENST00000512418 COL6A3P12111 3177 aa17.49■□□□□ 0.39
CCHCR1-229ENST00000512418 LTBP2Q14767 1821 aa17.49■□□□□ 0.39
CCHCR1-229ENST00000512418 SYNGAP1Q96PV0 1343 aa17.48■□□□□ 0.39
CCHCR1-229ENST00000512418 ZNF865P0CJ78 1059 aaPredicted RBP17.48■□□□□ 0.39
CCHCR1-229ENST00000512418 ADCYAP1R1P41586 468 aa17.48■□□□□ 0.39
CCHCR1-229ENST00000512418 OAZ1P54368 228 aa17.48■□□□□ 0.39
CCHCR1-229ENST00000512418 TFAP4Q01664 338 aa17.48■□□□□ 0.39
CCHCR1-229ENST00000512418 PPP4R3BQ5MIZ7 849 aa17.48■□□□□ 0.39
CCHCR1-229ENST00000512418 C1orf53Q5VUE5 145 aa17.48■□□□□ 0.39
CCHCR1-229ENST00000512418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCHCR1-229ENST00000512418 RNF180Q86T96 592 aa17.48■□□□□ 0.39
CCHCR1-229ENST00000512418 CPXCR1Q8N123 301 aa17.48■□□□□ 0.39
CCHCR1-229ENST00000512418 SMCHD1A6NHR9 2005 aa17.48■□□□□ 0.39
CCHCR1-229ENST00000512418 DNAJC25-GNG10A0A024R161 153 aa17.47■□□□□ 0.39
CCHCR1-229ENST00000512418 BMP3P12645 472 aa17.47■□□□□ 0.39
CCHCR1-229ENST00000512418 TAL1P17542 331 aaPredicted RBP17.47■□□□□ 0.39
CCHCR1-229ENST00000512418 TRIM60Q495X7 471 aa17.47■□□□□ 0.39
CCHCR1-229ENST00000512418 ANKRD45Q5TZF3 282 aa17.47■□□□□ 0.39
CCHCR1-229ENST00000512418 SLFN13Q68D06 897 aa17.47■□□□□ 0.39
CCHCR1-229ENST00000512418 EVI5LQ96CN4 794 aa17.47■□□□□ 0.39
CCHCR1-229ENST00000512418 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
CCHCR1-229ENST00000512418 RAVER2Q9HCJ3 691 aaKnown RBP17.47■□□□□ 0.39
CCHCR1-229ENST00000512418 FBXO40Q9UH90 709 aa17.47■□□□□ 0.39
CCHCR1-229ENST00000512418 PHF24Q9UPV7 400 aa17.47■□□□□ 0.39
CCHCR1-229ENST00000512418 FOXP2O15409 715 aa17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 PGK1P00558 417 aa17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 FDX1P10109 184 aa17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 SLC4A3P48751 1232 aa17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 STAT2P52630 851 aa17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 HDAC1Q13547 482 aaPredicted RBP17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 MAMDC4Q6UXC1 1216 aa17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 CCDC129Q6ZRS4 1044 aa17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 ZNF467Q7Z7K2 595 aaPredicted RBP17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 DEFB123Q8N688 67 aa17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 CHST13Q8NET6 341 aa17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 FERMT2Q96AC1 680 aa17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 PRDM5Q9NQX1 630 aaPredicted RBP17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCHCR1-229ENST00000512418 LAMA2P24043 3122 aaKnown RBP17.45■□□□□ 0.38
CCHCR1-229ENST00000512418 TSPY2A6NKD2 308 aa17.45■□□□□ 0.38
CCHCR1-229ENST00000512418 SLC1A4P43007 532 aa17.45■□□□□ 0.38
CCHCR1-229ENST00000512418 ANKRD35Q8N283 1001 aa17.45■□□□□ 0.38
CCHCR1-229ENST00000512418 GMCL1Q96IK5 515 aa17.45■□□□□ 0.38
CCHCR1-229ENST00000512418 ISY1Q9ULR0 285 aaKnown RBP17.45■□□□□ 0.38
CCHCR1-229ENST00000512418 TMEM232C9JQI7 657 aa17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 ADAMTS4O75173 837 aa17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 SNAI1O95863 264 aaPredicted RBP17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 PDE1AP54750 535 aa17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 Q7L0L9 218 aa17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 FAM160B2Q86V87 743 aa17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 CHURC1Q8WUH1 139 aa17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 LENG1Q96BZ8 264 aaPredicted RBP17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 PDLIM7Q9NR12 457 aa17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 ANAPC4Q9UJX5 808 aa17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 ZHX1Q9UKY1 873 aaPredicted RBP17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 FAM184BQ9ULE4 1060 aa17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 STX8Q9UNK0 236 aa17.44■□□□□ 0.38
CCHCR1-229ENST00000512418 A0A1W2PQ45 241 aaPredicted RBP17.43■□□□□ 0.38
CCHCR1-229ENST00000512418 A0A1W2PQY0 241 aa17.43■□□□□ 0.38
CCHCR1-229ENST00000512418 CTDSPL2Q05D32 466 aa17.43■□□□□ 0.38
CCHCR1-229ENST00000512418 IKQ13123 557 aaPredicted RBP17.43■□□□□ 0.38
CCHCR1-229ENST00000512418 TICAM2Q86XR7 235 aa17.43■□□□□ 0.38
CCHCR1-229ENST00000512418 STAG1Q8WVM7 1258 aa17.43■□□□□ 0.38
CCHCR1-229ENST00000512418 TSEN34Q9BSV6 310 aaKnown RBP17.43■□□□□ 0.38
CCHCR1-229ENST00000512418 HELLSQ9NRZ9 838 aa17.43■□□□□ 0.38
CCHCR1-229ENST00000512418 SYNRGQ9UMZ2 1314 aa17.43■□□□□ 0.38
CCHCR1-229ENST00000512418 MCCP23508 829 aa17.42■□□□□ 0.38
CCHCR1-229ENST00000512418 TLE2Q04725 743 aa17.42■□□□□ 0.38
CCHCR1-229ENST00000512418 VPS53Q5VIR6 699 aa17.42■□□□□ 0.38
CCHCR1-229ENST00000512418 FGD4Q96M96 766 aa17.42■□□□□ 0.38
CCHCR1-229ENST00000512418 ABHD16BQ9H3Z7 469 aa17.42■□□□□ 0.38
CCHCR1-229ENST00000512418 ACAD9Q9H845 621 aa17.42■□□□□ 0.38
CCHCR1-229ENST00000512418 IL17RBQ9NRM6 502 aa17.42■□□□□ 0.38
CCHCR1-229ENST00000512418 HOMER2Q9NSB8 354 aa17.42■□□□□ 0.38
CCHCR1-229ENST00000512418 MTMR10Q9NXD2 777 aa17.42■□□□□ 0.38
CCHCR1-229ENST00000512418 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.42■□□□□ 0.38
CCHCR1-229ENST00000512418 TRIM43BA6NCK2 446 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 MOXD2PA6NHM9 499 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 ORC4O43929 436 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 PLA2G6O60733 806 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms