RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 PNMA1Q8ND90 353 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 ANKS1AQ92625 1134 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 TEX13BQ9BXU2 312 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 SPATC1LQ9H0A9 340 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 R3HDMLQ9H3Y0 253 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 INCENPQ9NQS7 918 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 RBPJLQ9UBG7 517 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 MYH4Q9Y623 1939 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 NEDD4P46934 1319 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 WDR19Q8NEZ3 1342 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 ADGRA2Q96PE1 1338 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 SLC15A5A6NIM6 579 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 VWA5AO00534 786 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 PRC1O43663 620 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 NMT2O60551 498 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 FCER1AP12319 257 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 RGS2P41220 211 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 NOVP48745 357 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 KCTD2Q14681 263 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 NECTIN1Q15223 517 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 TSGA10IPQ3SY00 556 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 BLOC1S2Q6QNY1 142 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 SKAP1Q86WV1 359 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 NCAPG2Q86XI2 1143 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 ENAHQ8N8S7 591 aaPredicted RBP8.72□□□□□ -1.01
NR1I3-231ENST00000512340 CTCFLQ8NI51 663 aaPredicted RBP8.72□□□□□ -1.01
NR1I3-231ENST00000512340 ATG4CQ96DT6 458 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 NEK1Q96PY6 1258 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 ZKSCAN3Q9BRR0 538 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 TMEM106CQ9BVX2 250 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 NBPF3Q9H094 633 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 IL17RBQ9NRM6 502 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 PTPN22Q9Y2R2 807 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 LAMA4Q16363 1823 aa8.72□□□□□ -1.01
NR1I3-231ENST00000512340 B4DLN1 442 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 XRCC5P13010 732 aaKnown RBP8.71□□□□□ -1.02
NR1I3-231ENST00000512340 MRPL12P52815 198 aaKnown RBP8.71□□□□□ -1.02
NR1I3-231ENST00000512340 IRF5Q13568 498 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 SYDE2Q5VT97 1194 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 DHX32Q7L7V1 743 aaKnown RBP8.71□□□□□ -1.02
NR1I3-231ENST00000512340 DPP9Q86TI2 863 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 RIOX2Q8IUF8 465 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 ABRAQ8N0Z2 381 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 CHST13Q8NET6 341 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 PXYLP1Q8TE99 480 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 DDX11Q96FC9 970 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 MPHOSPH6Q99547 160 aaKnown RBP8.71□□□□□ -1.02
NR1I3-231ENST00000512340 LZTS2Q9BRK4 669 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 IL25Q9H293 177 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 ADAMTS5Q9UNA0 930 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 SLC12A7Q9Y666 1083 aa8.71□□□□□ -1.02
NR1I3-231ENST00000512340 GREB1LQ9C091 1923 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-231ENST00000512340 CCDC196A0A1B0GTZ2 297 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 ATP2A1O14983 1001 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 ADCY3O60266 1144 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 DDAH1O94760 285 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 PDHBP11177 359 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 GRK4P32298 578 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 HSPA4P34932 840 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 LIFRP42702 1097 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 SLC4A3P48751 1232 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 FLT3LGP49771 235 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 ZNF543Q08ER8 600 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 PPP2R5BQ15173 497 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 MFSD14CQ5VZR4 134 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 SNRNP48Q6IEG0 339 aaKnown RBP8.7□□□□□ -1.02
NR1I3-231ENST00000512340 BTNL9Q6UXG8 535 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 KCTD1Q719H9 257 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 GPR142Q7Z601 462 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 CPXCR1Q8N123 301 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 NKX2-3Q8TAU0 364 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 CHMP4CQ96CF2 233 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 MAP3K14Q99558 947 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 NUP88Q99567 741 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-231ENST00000512340 APBA2Q99767 749 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 MAF1Q9H063 256 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 SLC38A10Q9HBR0 1119 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 TXNRD2Q9NNW7 524 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 GPCPD1Q9NPB8 672 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 CYP46A1Q9Y6A2 500 aa8.7□□□□□ -1.02
NR1I3-231ENST00000512340 ECM2O94769 699 aaPredicted RBP8.69□□□□□ -1.02
NR1I3-231ENST00000512340 ERCC3P19447 782 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 PTPREP23469 700 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 ANAPC15P60006 121 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 PRKCZQ05513 592 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 MAP2K5Q13163 448 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 TMEM132BQ14DG7 1078 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 HABP4Q5JVS0 413 aaKnown RBP8.69□□□□□ -1.02
NR1I3-231ENST00000512340 KIAA1755Q5JYT7 1200 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 MB21D2Q8IYB1 491 aaPredicted RBP8.69□□□□□ -1.02
NR1I3-231ENST00000512340 ANKRD35Q8N283 1001 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 IL27Q8NEV9 243 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 NUP133Q8WUM0 1156 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 JAKMIP1Q96N16 626 aaKnown RBP8.69□□□□□ -1.02
NR1I3-231ENST00000512340 MMP19Q99542 508 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 MOV10L1Q9BXT6 1211 aaKnown RBP8.69□□□□□ -1.02
NR1I3-231ENST00000512340 ARHGAP39Q9C0H5 1083 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 ACAD9Q9H845 621 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 FBXO28Q9NVF7 368 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 BTBD7Q9P203 1132 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms