RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 UBAC1Q9BSL1 405 aa18.71■□□□□ 0.59
DDX41-214ENST00000512334 MROH8Q9H579 483 aa18.71■□□□□ 0.59
DDX41-214ENST00000512334 ZSWIM5Q9P217 1185 aa18.71■□□□□ 0.59
DDX41-214ENST00000512334 HMGCRP04035 888 aa18.7■□□□□ 0.58
DDX41-214ENST00000512334 CCL5P13501 91 aa18.7■□□□□ 0.58
DDX41-214ENST00000512334 ZKSCAN1P17029 563 aaPredicted RBP18.7■□□□□ 0.58
DDX41-214ENST00000512334 GRB14Q14449 540 aa18.7■□□□□ 0.58
DDX41-214ENST00000512334 SNRNP48Q6IEG0 339 aaKnown RBP18.7■□□□□ 0.58
DDX41-214ENST00000512334 DGKHQ86XP1 1220 aa18.7■□□□□ 0.58
DDX41-214ENST00000512334 CPXCR1Q8N123 301 aa18.7■□□□□ 0.58
DDX41-214ENST00000512334 USP6NLQ92738 828 aa18.7■□□□□ 0.58
DDX41-214ENST00000512334 ZSCAN10Q96SZ4 725 aaPredicted RBP18.7■□□□□ 0.58
DDX41-214ENST00000512334 APBA2Q99767 749 aa18.7■□□□□ 0.58
DDX41-214ENST00000512334 LSG1Q9H089 658 aaKnown RBP18.7■□□□□ 0.58
DDX41-214ENST00000512334 RNF208Q9H0X6 261 aa18.7■□□□□ 0.58
DDX41-214ENST00000512334 ZNF214Q9UL59 606 aaPredicted RBP18.7■□□□□ 0.58
DDX41-214ENST00000512334 STRNO43815 780 aa18.69■□□□□ 0.58
DDX41-214ENST00000512334 XRCC5P13010 732 aaKnown RBP18.69■□□□□ 0.58
DDX41-214ENST00000512334 RALYLQ86SE5 291 aaKnown RBP18.69■□□□□ 0.58
DDX41-214ENST00000512334 RIOX2Q8IUF8 465 aa18.69■□□□□ 0.58
DDX41-214ENST00000512334 TRIB2Q92519 343 aa18.69■□□□□ 0.58
DDX41-214ENST00000512334 TEX13BQ9BXU2 312 aa18.69■□□□□ 0.58
DDX41-214ENST00000512334 KAT14Q9H8E8 782 aa18.69■□□□□ 0.58
DDX41-214ENST00000512334 RAVER2Q9HCJ3 691 aaKnown RBP18.69■□□□□ 0.58
DDX41-214ENST00000512334 TNKSO95271 1327 aa18.69■□□□□ 0.58
DDX41-214ENST00000512334 FRMPD2Q68DX3 1309 aaPredicted RBP18.69■□□□□ 0.58
DDX41-214ENST00000512334 FCER1AP12319 257 aa18.68■□□□□ 0.58
DDX41-214ENST00000512334 ADORA2AP29274 412 aa18.68■□□□□ 0.58
DDX41-214ENST00000512334 COPB2P35606 906 aa18.68■□□□□ 0.58
DDX41-214ENST00000512334 RGS19P49795 217 aa18.68■□□□□ 0.58
DDX41-214ENST00000512334 MLLT1Q03111 559 aaPredicted RBP18.68■□□□□ 0.58
DDX41-214ENST00000512334 CCL14Q16627 93 aa18.68■□□□□ 0.58
DDX41-214ENST00000512334 DPP9Q86TI2 863 aa18.68■□□□□ 0.58
DDX41-214ENST00000512334 TRMT44Q8IYL2 757 aaKnown RBP18.68■□□□□ 0.58
DDX41-214ENST00000512334 UNC93B1Q9H1C4 597 aa18.68■□□□□ 0.58
DDX41-214ENST00000512334 SLC38A10Q9HBR0 1119 aa18.68■□□□□ 0.58
DDX41-214ENST00000512334 GPCPD1Q9NPB8 672 aa18.68■□□□□ 0.58
DDX41-214ENST00000512334 TAF6LQ9Y6J9 622 aa18.68■□□□□ 0.58
DDX41-214ENST00000512334 E7EWF7 191 aa18.67■□□□□ 0.58
DDX41-214ENST00000512334 FDX1P10109 184 aa18.67■□□□□ 0.58
DDX41-214ENST00000512334 PDHBP11177 359 aa18.67■□□□□ 0.58
DDX41-214ENST00000512334 EN2P19622 333 aaPredicted RBP18.67■□□□□ 0.58
DDX41-214ENST00000512334 TRIM32Q13049 653 aa18.67■□□□□ 0.58
DDX41-214ENST00000512334 TTBK2Q6IQ55 1244 aa18.67■□□□□ 0.58
DDX41-214ENST00000512334 CYB5R4Q7L1T6 521 aa18.67■□□□□ 0.58
DDX41-214ENST00000512334 ENAHQ8N8S7 591 aaPredicted RBP18.67■□□□□ 0.58
DDX41-214ENST00000512334 NCOA7Q8NI08 942 aa18.67■□□□□ 0.58
DDX41-214ENST00000512334 MMP19Q99542 508 aa18.67■□□□□ 0.58
DDX41-214ENST00000512334 PRR12Q9ULL5 1215 aa18.67■□□□□ 0.58
DDX41-214ENST00000512334 RBBP6Q7Z6E9 1792 aaKnown RBP18.67■□□□□ 0.58
DDX41-214ENST00000512334 PLA2G6O60733 806 aa18.66■□□□□ 0.58
DDX41-214ENST00000512334 SLC16A2P36021 539 aa18.66■□□□□ 0.58
DDX41-214ENST00000512334 SNAP25P60880 206 aa18.66■□□□□ 0.58
DDX41-214ENST00000512334 IFIT1BQ5T764 474 aaKnown RBP18.66■□□□□ 0.58
DDX41-214ENST00000512334 ABRAQ8N0Z2 381 aa18.66■□□□□ 0.58
DDX41-214ENST00000512334 PNMA1Q8ND90 353 aa18.66■□□□□ 0.58
DDX41-214ENST00000512334 NPLOC4Q8TAT6 608 aa18.66■□□□□ 0.58
DDX41-214ENST00000512334 SLC5A4Q9NY91 659 aa18.66■□□□□ 0.58
DDX41-214ENST00000512334 RIPK3Q9Y572 518 aa18.66■□□□□ 0.58
DDX41-214ENST00000512334 KIAA0100Q14667 2235 aaKnown RBP18.66■□□□□ 0.58
DDX41-214ENST00000512334 ATP2A1O14983 1001 aa18.65■□□□□ 0.58
DDX41-214ENST00000512334 PRKAR2AP13861 404 aaKnown RBP18.65■□□□□ 0.58
DDX41-214ENST00000512334 OAZ1P54368 228 aa18.65■□□□□ 0.58
DDX41-214ENST00000512334 ZNF543Q08ER8 600 aa18.65■□□□□ 0.58
DDX41-214ENST00000512334 KCTD2Q14681 263 aa18.65■□□□□ 0.58
DDX41-214ENST00000512334 CCDC174Q6PII3 467 aa18.65■□□□□ 0.58
DDX41-214ENST00000512334 STOX1Q6ZVD7 989 aa18.65■□□□□ 0.58
DDX41-214ENST00000512334 ANKS1AQ92625 1134 aa18.65■□□□□ 0.58
DDX41-214ENST00000512334 ZNF236Q9UL36 1845 aa18.65■□□□□ 0.58
DDX41-214ENST00000512334 ERICH2A1L162 156 aa18.64■□□□□ 0.57
DDX41-214ENST00000512334 IFIT3O14879 490 aaKnown RBP18.64■□□□□ 0.57
DDX41-214ENST00000512334 SLC27A2O14975 620 aa18.64■□□□□ 0.57
DDX41-214ENST00000512334 COBLO75128 1261 aa18.64■□□□□ 0.57
DDX41-214ENST00000512334 GJB1P08034 283 aa18.64■□□□□ 0.57
DDX41-214ENST00000512334 HOXC6P09630 235 aa18.64■□□□□ 0.57
DDX41-214ENST00000512334 SART3Q15020 963 aaKnown RBP18.64■□□□□ 0.57
DDX41-214ENST00000512334 SYDE2Q5VT97 1194 aa18.64■□□□□ 0.57
DDX41-214ENST00000512334 MFSD14CQ5VZR4 134 aa18.64■□□□□ 0.57
DDX41-214ENST00000512334 CREB3L3Q68CJ9 461 aa18.64■□□□□ 0.57
DDX41-214ENST00000512334 CHST3Q7LGC8 479 aa18.64■□□□□ 0.57
DDX41-214ENST00000512334 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.64■□□□□ 0.57
DDX41-214ENST00000512334 HMX1Q9NP08 348 aaPredicted RBP18.64■□□□□ 0.57
DDX41-214ENST00000512334 HOMER2Q9NSB8 354 aa18.64■□□□□ 0.57
DDX41-214ENST00000512334 FLRT1Q9NZU1 646 aa18.64■□□□□ 0.57
DDX41-214ENST00000512334 RPTORQ8N122 1335 aa18.64■□□□□ 0.57
DDX41-214ENST00000512334 GOLGA8HP0CJ92 632 aa18.63■□□□□ 0.57
DDX41-214ENST00000512334 SNHG28P0DPA3 235 aa18.63■□□□□ 0.57
DDX41-214ENST00000512334 GPATCH4Q5T3I0 446 aaKnown RBP18.63■□□□□ 0.57
DDX41-214ENST00000512334 AGBL1Q96MI9 1066 aa18.63■□□□□ 0.57
DDX41-214ENST00000512334 DEFB118Q96PH6 123 aa18.63■□□□□ 0.57
DDX41-214ENST00000512334 PGK2P07205 417 aa18.62■□□□□ 0.57
DDX41-214ENST00000512334 GJA8P48165 433 aa18.62■□□□□ 0.57
DDX41-214ENST00000512334 CACNB2Q08289 660 aaPredicted RBP18.62■□□□□ 0.57
DDX41-214ENST00000512334 NECTIN1Q15223 517 aa18.62■□□□□ 0.57
DDX41-214ENST00000512334 SEC23AQ15436 765 aa18.62■□□□□ 0.57
DDX41-214ENST00000512334 RNF20Q5VTR2 975 aa18.62■□□□□ 0.57
DDX41-214ENST00000512334 BTNL9Q6UXG8 535 aa18.62■□□□□ 0.57
DDX41-214ENST00000512334 CHST13Q8NET6 341 aa18.62■□□□□ 0.57
DDX41-214ENST00000512334 U2AF1L4Q8WU68 220 aaKnown RBP18.62■□□□□ 0.57
DDX41-214ENST00000512334 DDX11Q96FC9 970 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms