RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 GPR75-ASB3A0A0A6YYF3 556 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 STXBP3O00186 592 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 ADAMTS3O15072 1205 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 CYTH3O43739 400 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 IL1R1P14778 569 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 RASA1P20936 1047 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 NOVP48745 357 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 GNG11P61952 73 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 NFIXQ14938 502 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 KRT31Q15323 416 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 CRY2Q49AN0 593 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 TYW1BQ6NUM6 668 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 RASGRP2Q7LDG7 609 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 AMIGO3Q86WK7 504 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 SMYD4Q8IYR2 804 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-210ENST00000512332 KRT222Q8N1A0 295 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 MNS1Q8NEH6 495 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 CCDC12Q8WUD4 166 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-210ENST00000512332 KIFC2Q96AC6 838 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 AK8Q96MA6 479 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 TMEM47Q9BQJ4 181 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 RTFDC1Q9BY42 306 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-210ENST00000512332 ZMYND12Q9H0C1 365 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 CTNND2Q9UQB3 1225 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 ADGRG1Q9Y653 693 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 TNRC6CQ9HCJ0 1690 aaKnown RBP10.43□□□□□ -0.74
CPNE4-210ENST00000512332 TAF1LQ8IZX4 1826 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 LY75O60449 1722 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 THSD7AQ9UPZ6 1657 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 USP17L3A6NCW0 530 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 USP17L4A6NCW7 530 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 NPHP1O15259 732 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 ATP2B4P23634 1241 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 STAT6P42226 847 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 GABPB1Q06547 395 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-210ENST00000512332 ORC2Q13416 577 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-210ENST00000512332 TUBB2AQ13885 445 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 SLC35G1Q2M3R5 365 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 ARHGAP29Q52LW3 1261 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 NAALADL2Q58DX5 795 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 TCP11X2Q5H9J9 407 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 WWC2Q6AWC2 1192 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 C16orf86Q6ZW13 317 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 USP17L1Q7RTZ2 530 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 TMTC1Q8IUR5 882 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 ADSSL1Q8N142 457 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 CCDC24Q8N4L8 307 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 CNBD1Q8NA66 436 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 NEDD1Q8NHV4 660 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 TGFBRAP1Q8WUH2 860 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 GPKOWQ92917 476 aaPredicted RBP eCLIP10.43□□□□□ -0.74
CPNE4-210ENST00000512332 C8orf37Q96NL8 207 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 WDR24Q96S15 920 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 TUBB2BQ9BVA1 445 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 BLZF1Q9H2G9 400 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 KBTBD4Q9NVX7 518 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 MRFAP1Q9Y605 127 aa10.43□□□□□ -0.74
CPNE4-210ENST00000512332 SBF2Q86WG5 1849 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 N4BP3O15049 544 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 GYPCP04921 128 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 BMS1Q14692 1282 aaKnown RBP10.42□□□□□ -0.74
CPNE4-210ENST00000512332 DIXDC1Q155Q3 683 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 SLF2Q8IX21 1173 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 LRRN4CLQ8ND94 238 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 NELFBQ8WX92 580 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 STAMQ92783 540 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 CD209Q9NNX6 404 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 ARGLU1Q9NWB6 273 aaPredicted RBP10.42□□□□□ -0.74
CPNE4-210ENST00000512332 JAG2Q9Y219 1238 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 ATP8B1O43520 1251 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 RHOBTB3O94955 611 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 GNA11P29992 359 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 CASP14P31944 242 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 UBA7P41226 1012 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 PRCPP42785 496 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 COPB1P53618 953 aaKnown RBP10.42□□□□□ -0.74
CPNE4-210ENST00000512332 TUBB4BP68371 445 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 KARSQ15046 597 aaKnown RBP10.42□□□□□ -0.74
CPNE4-210ENST00000512332 RAD9BQ6WBX8 426 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 KRT25Q7Z3Z0 450 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 CARD6Q9BX69 1037 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 ZNF446Q9NWS9 450 aa10.42□□□□□ -0.74
CPNE4-210ENST00000512332 SOWAHDA6NJG2 315 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 KCNJ18B7U540 433 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 KLRF2D3W0D1 207 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 EEF1GP26641 437 aaKnown RBP10.41□□□□□ -0.74
CPNE4-210ENST00000512332 CDK8P49336 464 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 FAM193AP78312 1265 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 KCNJ12Q14500 433 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 GRIK5Q16478 980 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 HEATR3Q7Z4Q2 680 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 GPR161Q8N6U8 529 aaKnown RBP10.41□□□□□ -0.74
CPNE4-210ENST00000512332 GIMAP8Q8ND71 665 aaPredicted RBP10.41□□□□□ -0.74
CPNE4-210ENST00000512332 TBC1D22AQ8WUA7 517 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 MRPL44Q9H9J2 332 aaKnown RBP10.41□□□□□ -0.74
CPNE4-210ENST00000512332 PODXL2Q9NZ53 605 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 TTF2Q9UNY4 1162 aaKnown RBP10.41□□□□□ -0.74
CPNE4-210ENST00000512332 NAV1Q8NEY1 1877 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 A0A1W2PQC6 194 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 ESYT2A0FGR8 921 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms