RNA–Protein interactions for RNA: ENST00000512153.5

COPB2-208, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-208ENST00000512153 VCPKMTQ9H867 229 aa12.9□□□□□ -0.34
COPB2-208ENST00000512153 TMX2Q9Y320 296 aa12.9□□□□□ -0.34
COPB2-208ENST00000512153 CTDP1Q9Y5B0 961 aaPredicted RBP12.9□□□□□ -0.34
COPB2-208ENST00000512153 MUC6Q6W4X9 2439 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 MAGEB6P1A0A0J9YX57 407 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 FAM86C2PA6NEL3 165 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 RFXAPO00287 272 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 GPR37L1O60883 481 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 CCL23P55773 120 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
COPB2-208ENST00000512153 ACVR2BQ13705 512 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 TMEM67Q5HYA8 995 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 CCSAPQ6IQ19 270 aaPredicted RBP12.89□□□□□ -0.35
COPB2-208ENST00000512153 FAM126BQ8IXS8 530 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 HLA-CQ95604 372 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 CERS4Q9HA82 394 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 PCDHA11Q9Y5I1 949 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 MYH1P12882 1939 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 CDK5RAP2Q96SN8 1893 aa12.89□□□□□ -0.35
COPB2-208ENST00000512153 VWA5AO00534 786 aa12.88□□□□□ -0.35
COPB2-208ENST00000512153 SURF6O75683 361 aaKnown RBP12.88□□□□□ -0.35
COPB2-208ENST00000512153 SNAI1O95863 264 aaPredicted RBP12.88□□□□□ -0.35
COPB2-208ENST00000512153 ATP2A2P16615 1042 aaKnown RBP12.88□□□□□ -0.35
COPB2-208ENST00000512153 CST5P28325 142 aaPredicted RBP12.88□□□□□ -0.35
COPB2-208ENST00000512153 GABPAQ06546 454 aa12.88□□□□□ -0.35
COPB2-208ENST00000512153 UIMC1Q96RL1 719 aa12.88□□□□□ -0.35
COPB2-208ENST00000512153 CCDC8Q9H0W5 538 aaPredicted RBP12.88□□□□□ -0.35
COPB2-208ENST00000512153 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
COPB2-208ENST00000512153 SWAP70Q9UH65 585 aa12.88□□□□□ -0.35
COPB2-208ENST00000512153 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
COPB2-208ENST00000512153 TLL1O43897 1013 aa12.87□□□□□ -0.35
COPB2-208ENST00000512153 CCDC144BQ3MJ40 725 aa12.87□□□□□ -0.35
COPB2-208ENST00000512153 TMED8Q6PL24 325 aaPredicted RBP12.87□□□□□ -0.35
COPB2-208ENST00000512153 CLEC10AQ8IUN9 316 aa12.87□□□□□ -0.35
COPB2-208ENST00000512153 ABHD16BQ9H3Z7 469 aa12.87□□□□□ -0.35
COPB2-208ENST00000512153 GOPCQ9HD26 462 aa12.87□□□□□ -0.35
COPB2-208ENST00000512153 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.87□□□□□ -0.35
COPB2-208ENST00000512153 PPP1R9AQ9ULJ8 1098 aa12.87□□□□□ -0.35
COPB2-208ENST00000512153 MTCH2Q9Y6C9 303 aa12.87□□□□□ -0.35
COPB2-208ENST00000512153 PRRC2BQ5JSZ5 2229 aaKnown RBP12.86□□□□□ -0.35
COPB2-208ENST00000512153 ZNFX1Q9P2E3 1918 aaKnown RBP12.86□□□□□ -0.35
COPB2-208ENST00000512153 SMIM22K7EJ46 135 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 CT47B1P0C2W7 299 aaPredicted RBP12.86□□□□□ -0.35
COPB2-208ENST00000512153 AKR1B1P15121 316 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 GJA9P57773 515 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 BEX3Q00994 111 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 SNRNP48Q6IEG0 339 aaKnown RBP12.86□□□□□ -0.35
COPB2-208ENST00000512153 CXCL17Q6UXB2 119 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 MAMDC4Q6UXC1 1216 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 AMOTL1Q8IY63 956 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 ANKRD35Q8N283 1001 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 DYNLL2Q96FJ2 89 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 CCDC17Q96LX7 622 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 TEX13BQ9BXU2 312 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 ADAMTS5Q9UNA0 930 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 UMODL1Q5DID0 1318 aa12.86□□□□□ -0.35
COPB2-208ENST00000512153 FOCADQ5VW36 1801 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 KIF28PB7ZC32 967 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 IPO8O15397 1037 aaKnown RBP12.85□□□□□ -0.35
COPB2-208ENST00000512153 ZEB2O60315 1214 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 CABYRO75952 493 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 CD4P01730 458 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 CA3P07451 260 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 CYP2D6P10635 497 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 EEF2P13639 858 aaKnown RBP12.85□□□□□ -0.35
COPB2-208ENST00000512153 EVX2Q03828 476 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 ITGA7Q13683 1181 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 FAM83BQ5T0W9 1011 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 SLC9C2Q5TAH2 1124 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 SIAH1Q8IUQ4 282 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 CPXCR1Q8N123 301 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 PIAS4Q8N2W9 510 aaPredicted RBP12.85□□□□□ -0.35
COPB2-208ENST00000512153 SDR42E1Q8WUS8 393 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 ARNTL2Q8WYA1 636 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 ARHGAP45Q92619 1136 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 RIOK1Q9BRS2 568 aaKnown RBP12.85□□□□□ -0.35
COPB2-208ENST00000512153 UPF3AQ9H1J1 476 aaKnown RBP12.85□□□□□ -0.35
COPB2-208ENST00000512153 ANTXR1Q9H6X2 564 aa12.85□□□□□ -0.35
COPB2-208ENST00000512153 DBNLQ9UJU6 430 aaKnown RBP12.85□□□□□ -0.35
COPB2-208ENST00000512153 ZNF214Q9UL59 606 aaPredicted RBP12.85□□□□□ -0.35
COPB2-208ENST00000512153 BCAR3O75815 825 aa12.84□□□□□ -0.35
COPB2-208ENST00000512153 ACTN1P12814 892 aa12.84□□□□□ -0.35
COPB2-208ENST00000512153 MRE11P49959 708 aa12.84□□□□□ -0.35
COPB2-208ENST00000512153 TNFAIP2Q03169 654 aa12.84□□□□□ -0.35
COPB2-208ENST00000512153 CSPP1Q1MSJ5 1256 aa12.84□□□□□ -0.35
COPB2-208ENST00000512153 KRT40Q6A162 431 aa12.84□□□□□ -0.35
COPB2-208ENST00000512153 SCLYQ96I15 445 aa12.84□□□□□ -0.35
COPB2-208ENST00000512153 AP5M1Q9H0R1 490 aa12.84□□□□□ -0.35
COPB2-208ENST00000512153 TRPV6Q9H1D0 765 aa12.84□□□□□ -0.35
COPB2-208ENST00000512153 KANSL2Q9H9L4 492 aa12.84□□□□□ -0.35
COPB2-208ENST00000512153 DCP1AQ9NPI6 582 aaPredicted RBP12.84□□□□□ -0.35
COPB2-208ENST00000512153 TLR7Q9NYK1 1049 aaKnown RBP12.84□□□□□ -0.35
COPB2-208ENST00000512153 CHD9Q3L8U1 2897 aa12.83□□□□□ -0.35
COPB2-208ENST00000512153 PI4K2BG5E9Z4 385 aa12.83□□□□□ -0.36
COPB2-208ENST00000512153 ZBED4O75132 1171 aa12.83□□□□□ -0.36
COPB2-208ENST00000512153 POU3F3P20264 500 aaPredicted RBP12.83□□□□□ -0.36
COPB2-208ENST00000512153 TTF1Q15361 905 aaPredicted RBP12.83□□□□□ -0.36
COPB2-208ENST00000512153 ARMCX2Q7L311 632 aa12.83□□□□□ -0.36
COPB2-208ENST00000512153 DEFB128Q7Z7B8 93 aa12.83□□□□□ -0.36
COPB2-208ENST00000512153 ZNF467Q7Z7K2 595 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms