RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	KLHL6	Q8WZ60	621 aa		8.01	□□□□□ -1.13
MATR3-218	ENST00000511978	DHX38	Q92620	1227 aa	Known RBP	8.01	□□□□□ -1.13
MATR3-218	ENST00000511978	SMARCC1	Q92922	1105 aa	Predicted RBP	8.01	□□□□□ -1.13
MATR3-218	ENST00000511978	HRASLS5	Q96KN8	279 aa		8.01	□□□□□ -1.13
MATR3-218	ENST00000511978	GPR62	Q9BZJ7	368 aa		8.01	□□□□□ -1.13
MATR3-218	ENST00000511978	MKRN2	Q9H000	416 aa	Known RBP	8.01	□□□□□ -1.13
MATR3-218	ENST00000511978	PCDHB10	Q9UN67	800 aa		8.01	□□□□□ -1.13
MATR3-218	ENST00000511978	ADAMTS4	O75173	837 aa		8	□□□□□ -1.13
MATR3-218	ENST00000511978	GTF2F1	P35269	517 aa	Known RBP eCLIP	8	□□□□□ -1.13	2e-10	■■■□□ 15.1
MATR3-218	ENST00000511978	SNW1	Q13573	536 aa	Known RBP	8	□□□□□ -1.13
MATR3-218	ENST00000511978	AUH	Q13825	339 aa	Known RBP	8	□□□□□ -1.13
MATR3-218	ENST00000511978	AOC3	Q16853	763 aa		8	□□□□□ -1.13
MATR3-218	ENST00000511978	AXDND1	Q5T1B0	1012 aa	Predicted RBP	8	□□□□□ -1.13
MATR3-218	ENST00000511978	THAP5	Q7Z6K1	395 aa		8	□□□□□ -1.13
MATR3-218	ENST00000511978	VSIG10L	Q86VR7	867 aa		8	□□□□□ -1.13
MATR3-218	ENST00000511978	CCDC144CP	Q8IYA2	1237 aa		8	□□□□□ -1.13
MATR3-218	ENST00000511978	STK11IP	Q8N1F8	1099 aa		8	□□□□□ -1.13
MATR3-218	ENST00000511978	BCL7C	Q8WUZ0	217 aa	Predicted RBP	8	□□□□□ -1.13
MATR3-218	ENST00000511978	HNRNPLL	Q8WVV9	542 aa	Known RBP	8	□□□□□ -1.13
MATR3-218	ENST00000511978	PCMTD2	Q9NV79	361 aa		8	□□□□□ -1.13
MATR3-218	ENST00000511978	CCDC39	Q9UFE4	941 aa		8	□□□□□ -1.13
MATR3-218	ENST00000511978	LOC105371045	A0A1W2PR82	267 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	SHISA3	A0PJX4	238 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	PLEKHD1	A6NEE1	506 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978		H3BS24	57 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	SHOX	O15266	292 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	TP53	P04637	393 aa	Predicted RBP	7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	SLC7A5	Q01650	507 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	TRO	Q12816	1431 aa	Predicted RBP	7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	BNIP3	Q12983	259 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	GNPTAB	Q3T906	1256 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	ANKRD39	Q53RE8	183 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	ARTN	Q5T4W7	220 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	C7orf61	Q8IZ16	206 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	CFAP74	Q9C0B2	1584 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	PRDM14	Q9GZV8	571 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	MYO5C	Q9NQX4	1742 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	FAM86C1	Q9NVL1	165 aa		7.99	□□□□□ -1.13
MATR3-218	ENST00000511978	RBL2	Q08999	1139 aa		7.98	□□□□□ -1.13
MATR3-218	ENST00000511978	DCAF15	Q66K64	600 aa		7.98	□□□□□ -1.13
MATR3-218	ENST00000511978	VHLL	Q6RSH7	139 aa		7.98	□□□□□ -1.13
MATR3-218	ENST00000511978	TMC3	Q7Z5M5	1100 aa		7.98	□□□□□ -1.13
MATR3-218	ENST00000511978	SPRED2	Q7Z698	418 aa		7.98	□□□□□ -1.13
MATR3-218	ENST00000511978	MICAL1	Q8TDZ2	1067 aa		7.98	□□□□□ -1.13
MATR3-218	ENST00000511978	ATP13A1	Q9HD20	1204 aa		7.98	□□□□□ -1.13
MATR3-218	ENST00000511978	ZSWIM5	Q9P217	1185 aa		7.98	□□□□□ -1.13
MATR3-218	ENST00000511978	VPS8	Q8N3P4	1428 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	SCO2	A0A1W2PP80	73 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	WASH4P	A8MWX3	477 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	CBFA2T2	O43439	604 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	CD96	P40200	585 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	NMI	Q13287	307 aa	Predicted RBP	7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	RAB33A	Q14088	237 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	FXN	Q16595	210 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	GAB4	Q2WGN9	574 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	LARP1B	Q659C4	914 aa	Known RBP	7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	CKAP2L	Q8IYA6	745 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	CELF2-AS1	Q8N7Q2	184 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	ASB11	Q8WXH4	323 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	UBE2F	Q969M7	185 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	DRC1	Q96MC2	740 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	TRIT1	Q9H3H1	467 aa	Known RBP	7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	GPATCH2	Q9NW75	528 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	SLC5A6	Q9Y289	635 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	PCDHB12	Q9Y5F1	795 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	NEO1	Q92859	1461 aa		7.97	□□□□□ -1.13
MATR3-218	ENST00000511978	NCAPH	Q15003	741 aa		7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	KIAA1211L	Q6NV74	962 aa		7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	C6orf15	Q6UXA7	325 aa	Predicted RBP	7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	FAM178B	Q8IXR5	827 aa		7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	ENOX1	Q8TC92	643 aa	Known RBP	7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	HAUS7	Q99871	368 aa		7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	HDAC8	Q9BY41	377 aa		7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	PRR13	Q9NZ81	148 aa		7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	SUSD2	Q9UGT4	822 aa		7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	CDK11A	Q9UQ88	783 aa	Predicted RBP	7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	R3HCC1	Q9Y3T6	440 aa	Known RBP	7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	EHBP1L1	Q8N3D4	1523 aa		7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	ARAP3	Q8WWN8	1544 aa		7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	PREX2	Q70Z35	1606 aa		7.96	□□□□□ -1.14
MATR3-218	ENST00000511978	FANCA	O15360	1455 aa		7.95	□□□□□ -1.14
MATR3-218	ENST00000511978		B2RBV5	119 aa		7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	SIGLEC6	O43699	453 aa		7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	WNT11	O96014	354 aa		7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	CD8B	P10966	210 aa		7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	TPP2	P29144	1249 aa	Predicted RBP	7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	NBPF6	Q5VWK0	638 aa		7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	SYTL5	Q8TDW5	730 aa	Predicted RBP	7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	NBPF4	Q96M43	638 aa		7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	KLHL25	Q9H0H3	589 aa		7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	ASCC2	Q9H1I8	757 aa	Predicted RBP	7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	GP6	Q9HCN6	339 aa		7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	ZFP64	Q9NPA5	681 aa		7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	PAK6	Q9NQU5	681 aa	Predicted RBP	7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	FBXL21	Q9UKT6	434 aa		7.95	□□□□□ -1.14
MATR3-218	ENST00000511978	ANGEL1	Q9UNK9	670 aa	Known RBP	7.95	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms