RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 CHMP4CQ96CF2 233 aa11.78□□□□□ -0.52
COPS4-211ENST00000511891 ZNF287Q9HBT7 754 aa11.78□□□□□ -0.52
COPS4-211ENST00000511891 MTMR4Q9NYA4 1195 aa11.78□□□□□ -0.52
COPS4-211ENST00000511891 PARP14Q460N5 1801 aa11.78□□□□□ -0.52
COPS4-211ENST00000511891 STRNO43815 780 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 EVI5O60447 810 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 SLC3A2P08195 630 aaKnown RBP11.77□□□□□ -0.53
COPS4-211ENST00000511891 CNGA1P29973 690 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 IRX6P78412 446 aaPredicted RBP11.77□□□□□ -0.53
COPS4-211ENST00000511891 TFAP4Q01664 338 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 NUCB1Q02818 461 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 PDE4BQ07343 736 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 NMIQ13287 307 aaPredicted RBP11.77□□□□□ -0.53
COPS4-211ENST00000511891 ZNF589Q86UQ0 364 aaPredicted RBP11.77□□□□□ -0.53
COPS4-211ENST00000511891 PLEKHM2Q8IWE5 1019 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 ANKLE1Q8NAG6 615 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 NEDD1Q8NHV4 660 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 SLF1Q9BQI6 1058 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 MROH8Q9H579 483 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 C11orf49Q9H6J7 331 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 HELLSQ9NRZ9 838 aa11.77□□□□□ -0.53
COPS4-211ENST00000511891 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.77□□□□□ -0.53
COPS4-211ENST00000511891 COL11A1P12107 1806 aaPredicted RBP11.76□□□□□ -0.53
COPS4-211ENST00000511891 NMT2O60551 498 aa11.76□□□□□ -0.53
COPS4-211ENST00000511891 TTLL1O95922 423 aa11.76□□□□□ -0.53
COPS4-211ENST00000511891 IGHA2P01877 340 aa11.76□□□□□ -0.53
COPS4-211ENST00000511891 CAPN2P17655 700 aa11.76□□□□□ -0.53
COPS4-211ENST00000511891 STAT3P40763 770 aa11.76□□□□□ -0.53
COPS4-211ENST00000511891 SLC4A3P48751 1232 aa11.76□□□□□ -0.53
COPS4-211ENST00000511891 MCMDC2Q4G0Z9 681 aa11.76□□□□□ -0.53
COPS4-211ENST00000511891 RIOX2Q8IUF8 465 aa11.76□□□□□ -0.53
COPS4-211ENST00000511891 MKL1Q969V6 931 aa11.76□□□□□ -0.53
COPS4-211ENST00000511891 MMP19Q99542 508 aa11.76□□□□□ -0.53
COPS4-211ENST00000511891 NBPF3Q9H094 633 aa11.76□□□□□ -0.53
COPS4-211ENST00000511891 ZNF214Q9UL59 606 aaPredicted RBP11.76□□□□□ -0.53
COPS4-211ENST00000511891 PLIN4Q96Q06 1357 aa11.76□□□□□ -0.53
COPS4-211ENST00000511891 ZNF236Q9UL36 1845 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 SLC25A27O95847 323 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 PGK2P07205 417 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 FCER1AP12319 257 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 CYBAP13498 195 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 PRAMEF19Q5SWL8 479 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 ANO1Q5XXA6 986 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 OLFML2BQ68BL8 750 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 SLFN13Q68D06 897 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 RASGRP2Q7LDG7 609 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 C7orf61Q8IZ16 206 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 ABRAQ8N0Z2 381 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 KIFC2Q96AC6 838 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 DDX20Q9UHI6 824 aaKnown RBP11.75□□□□□ -0.53
COPS4-211ENST00000511891 ISY1Q9ULR0 285 aaKnown RBP11.75□□□□□ -0.53
COPS4-211ENST00000511891 RIPK3Q9Y572 518 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 NR2E3Q9Y5X4 410 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 ALPK3Q96L96 1907 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 MYH4Q9Y623 1939 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 PFASO15067 1338 aa11.75□□□□□ -0.53
COPS4-211ENST00000511891 TSPY2A6NKD2 308 aa11.74□□□□□ -0.53
COPS4-211ENST00000511891 RANBP6O60518 1105 aaKnown RBP11.74□□□□□ -0.53
COPS4-211ENST00000511891 FGAP02671 866 aa11.74□□□□□ -0.53
COPS4-211ENST00000511891 HSPD1P10809 573 aaKnown RBP11.74□□□□□ -0.53
COPS4-211ENST00000511891 HAND2P61296 217 aa11.74□□□□□ -0.53
COPS4-211ENST00000511891 ALX1Q15699 326 aa11.74□□□□□ -0.53
COPS4-211ENST00000511891 SNRNP48Q6IEG0 339 aaKnown RBP11.74□□□□□ -0.53
COPS4-211ENST00000511891 CPXCR1Q8N123 301 aa11.74□□□□□ -0.53
COPS4-211ENST00000511891 PRPF38AQ8NAV1 312 aaKnown RBP11.74□□□□□ -0.53
COPS4-211ENST00000511891 GMCL1P1Q8NEA9 526 aa11.74□□□□□ -0.53
COPS4-211ENST00000511891 MAML3Q96JK9 1138 aa11.74□□□□□ -0.53
COPS4-211ENST00000511891 RAVER2Q9HCJ3 691 aaKnown RBP11.74□□□□□ -0.53
COPS4-211ENST00000511891 IL17RBQ9NRM6 502 aa11.74□□□□□ -0.53
COPS4-211ENST00000511891 TOMM22Q9NS69 142 aa11.74□□□□□ -0.53
COPS4-211ENST00000511891 RBM27Q9P2N5 1060 aaKnown RBP11.74□□□□□ -0.53
COPS4-211ENST00000511891 ANAPC4Q9UJX5 808 aa11.74□□□□□ -0.53
COPS4-211ENST00000511891 ZMYND8Q9ULU4 1186 aaPredicted RBP11.74□□□□□ -0.53
COPS4-211ENST00000511891 MTMR7Q9Y216 660 aa11.74□□□□□ -0.53
COPS4-211ENST00000511891 CEP290O15078 2479 aa11.74□□□□□ -0.53
COPS4-211ENST00000511891 TMEM232C9JQI7 657 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 ZBED4O75132 1171 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 COL6A1P12109 1028 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 BMP3P12645 472 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 SDSP20132 328 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 MCCP23508 829 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 KCTD2Q14681 263 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 RRP12Q5JTH9 1297 aaKnown RBP11.73□□□□□ -0.53
COPS4-211ENST00000511891 CCDC171Q6TFL3 1326 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 TEX13BQ9BXU2 312 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 OSBPL3Q9H4L5 887 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 SLC5A4Q9NY91 659 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 FEM1BQ9UK73 627 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 STX8Q9UNK0 236 aa11.73□□□□□ -0.53
COPS4-211ENST00000511891 CTDP1Q9Y5B0 961 aaPredicted RBP11.73□□□□□ -0.53
COPS4-211ENST00000511891 ORC4O43929 436 aa11.72□□□□□ -0.53
COPS4-211ENST00000511891 TAL1P17542 331 aaPredicted RBP11.72□□□□□ -0.53
COPS4-211ENST00000511891 SYN1P17600 705 aa11.72□□□□□ -0.53
COPS4-211ENST00000511891 PDE4AP27815 886 aa11.72□□□□□ -0.53
COPS4-211ENST00000511891 FXR1P51114 621 aaKnown RBP eCLIP11.72□□□□□ -0.53
COPS4-211ENST00000511891 SNAP25P60880 206 aa11.72□□□□□ -0.53
COPS4-211ENST00000511891 LRRC26Q2I0M4 334 aa11.72□□□□□ -0.53
COPS4-211ENST00000511891 ZNF792Q3KQV3 632 aa11.72□□□□□ -0.53
COPS4-211ENST00000511891 CWC27Q6UX04 472 aaKnown RBP11.72□□□□□ -0.53
COPS4-211ENST00000511891 SLC38A10Q9HBR0 1119 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms