RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 LAMA2P24043 3122 aaKnown RBP8.36□□□□□ -1.07
COPS4-209ENST00000511653 MGAMO43451 1857 aa8.36□□□□□ -1.07
COPS4-209ENST00000511653 CCL15-CCL14A0A0B4J2E2 113 aa8.36□□□□□ -1.07
COPS4-209ENST00000511653 SPATA31C2B4DYI2 1134 aa8.36□□□□□ -1.07
COPS4-209ENST00000511653 ST8SIA5O15466 376 aa8.36□□□□□ -1.07
COPS4-209ENST00000511653 GFRA3O60609 400 aa8.36□□□□□ -1.07
COPS4-209ENST00000511653 SP3Q02447 781 aa8.36□□□□□ -1.07
COPS4-209ENST00000511653 TNFAIP1Q13829 316 aa8.36□□□□□ -1.07
COPS4-209ENST00000511653 CCL15Q16663 113 aa8.36□□□□□ -1.07
COPS4-209ENST00000511653 LRRC24Q50LG9 513 aa8.36□□□□□ -1.07
COPS4-209ENST00000511653 FAM43AQ8N2R8 423 aa8.36□□□□□ -1.07
COPS4-209ENST00000511653 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.36□□□□□ -1.07
COPS4-209ENST00000511653 ZFP42Q96MM3 310 aa8.36□□□□□ -1.07
COPS4-209ENST00000511653 RIPOR2Q9Y4F9 1068 aa8.36□□□□□ -1.07
COPS4-209ENST00000511653 DOCK2Q92608 1830 aa8.35□□□□□ -1.07
COPS4-209ENST00000511653 DOCK3Q8IZD9 2030 aa8.35□□□□□ -1.07
COPS4-209ENST00000511653 ALDH1L1O75891 902 aa8.35□□□□□ -1.07
COPS4-209ENST00000511653 RGS20O76081 388 aa8.35□□□□□ -1.07
COPS4-209ENST00000511653 RBM25P49756 843 aaKnown RBP8.35□□□□□ -1.07
COPS4-209ENST00000511653 CHAF1AQ13111 956 aaPredicted RBP8.35□□□□□ -1.07
COPS4-209ENST00000511653 TAF1CQ15572 869 aaPredicted RBP8.35□□□□□ -1.07
COPS4-209ENST00000511653 RTN1Q16799 776 aa8.35□□□□□ -1.07
COPS4-209ENST00000511653 INTS3Q68E01 1043 aaKnown RBP8.35□□□□□ -1.07
COPS4-209ENST00000511653 OTUD7BQ6GQQ9 843 aa8.35□□□□□ -1.07
COPS4-209ENST00000511653 ANKRD44Q8N8A2 993 aa8.35□□□□□ -1.07
COPS4-209ENST00000511653 VGLL2Q8N8G2 317 aa8.35□□□□□ -1.07
COPS4-209ENST00000511653 ZNF280CQ8ND82 737 aa8.35□□□□□ -1.07
COPS4-209ENST00000511653 SRCIN1Q9C0H9 1055 aa8.35□□□□□ -1.07
COPS4-209ENST00000511653 BICC1Q9H694 974 aaKnown RBP8.35□□□□□ -1.07
COPS4-209ENST00000511653 PTCH2Q9Y6C5 1203 aa8.35□□□□□ -1.07
COPS4-209ENST00000511653 MYH2Q9UKX2 1941 aa8.34□□□□□ -1.07
COPS4-209ENST00000511653 UTYO14607 1347 aa8.34□□□□□ -1.07
COPS4-209ENST00000511653 FAM13AO94988 1023 aa8.34□□□□□ -1.07
COPS4-209ENST00000511653 ATP4AP20648 1035 aa8.34□□□□□ -1.07
COPS4-209ENST00000511653 HABP4Q5JVS0 413 aaKnown RBP8.34□□□□□ -1.07
COPS4-209ENST00000511653 GNASQ5JWF2 1037 aa8.34□□□□□ -1.07
COPS4-209ENST00000511653 FBXO33Q7Z6M2 555 aa8.34□□□□□ -1.07
COPS4-209ENST00000511653 KLHDC4Q8TBB5 520 aa8.34□□□□□ -1.07
COPS4-209ENST00000511653 ZNF333Q96JL9 665 aa8.34□□□□□ -1.07
COPS4-209ENST00000511653 HSH2DQ96JZ2 352 aa8.34□□□□□ -1.07
COPS4-209ENST00000511653 ARHGAP39Q9C0H5 1083 aa8.34□□□□□ -1.07
COPS4-209ENST00000511653 DCTN4Q9UJW0 460 aa8.34□□□□□ -1.07
COPS4-209ENST00000511653 SNCAIPQ9Y6H5 919 aa8.34□□□□□ -1.07
COPS4-209ENST00000511653 MROH5Q6ZUA9 1318 aa8.34□□□□□ -1.08
COPS4-209ENST00000511653 TTLL8A6PVC2 850 aa8.34□□□□□ -1.08
COPS4-209ENST00000511653 SOBPA7XYQ1 873 aa8.34□□□□□ -1.08
COPS4-209ENST00000511653 UPP2O95045 317 aa8.34□□□□□ -1.08
COPS4-209ENST00000511653 C11orf91Q3C1V1 193 aa8.34□□□□□ -1.08
COPS4-209ENST00000511653 RABL6Q3YEC7 729 aaPredicted RBP8.34□□□□□ -1.08
COPS4-209ENST00000511653 DNMT3LQ9UJW3 386 aa8.34□□□□□ -1.08
COPS4-209ENST00000511653 DNAH12Q6ZR08 3092 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 PHIPQ8WWQ0 1821 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 IGHA2P01877 340 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 TNNI2P48788 182 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 GTF2A2P52657 109 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 SLC9C1Q4G0N8 1177 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 METTL24Q5JXM2 366 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 APOBEC3HQ6NTF7 200 aaKnown RBP8.33□□□□□ -1.08
COPS4-209ENST00000511653 LYSMD3Q7Z3D4 306 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 VPS37DQ86XT2 251 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 ZKSCAN4Q969J2 545 aaPredicted RBP8.33□□□□□ -1.08
COPS4-209ENST00000511653 IFT43Q96FT9 208 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 WRNIP1Q96S55 665 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 ZFYVE28Q9HCC9 887 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.33□□□□□ -1.08
COPS4-209ENST00000511653 CSADQ9Y600 493 aa8.33□□□□□ -1.08
COPS4-209ENST00000511653 RPAP1Q9BWH6 1393 aaPredicted RBP8.32□□□□□ -1.08
COPS4-209ENST00000511653 ZNF521Q96K83 1311 aa8.32□□□□□ -1.08
COPS4-209ENST00000511653 BTBD19C9JJ37 291 aa8.32□□□□□ -1.08
COPS4-209ENST00000511653 PDE8BO95263 885 aa8.32□□□□□ -1.08
COPS4-209ENST00000511653 CTGFP29279 349 aa8.32□□□□□ -1.08
COPS4-209ENST00000511653 SMCPP49901 116 aaPredicted RBP8.32□□□□□ -1.08
COPS4-209ENST00000511653 TMC7Q7Z402 723 aa8.32□□□□□ -1.08
COPS4-209ENST00000511653 SH3TC2Q8TF17 1288 aa8.32□□□□□ -1.08
COPS4-209ENST00000511653 TEKT1Q969V4 418 aa8.32□□□□□ -1.08
COPS4-209ENST00000511653 GCC1Q96CN9 775 aa8.32□□□□□ -1.08
COPS4-209ENST00000511653 ASB16Q96NS5 453 aa8.32□□□□□ -1.08
COPS4-209ENST00000511653 USP20Q9Y2K6 914 aa8.32□□□□□ -1.08
COPS4-209ENST00000511653 UNC80Q8N2C7 3258 aa8.32□□□□□ -1.08
COPS4-209ENST00000511653 DOCK1Q14185 1865 aa8.31□□□□□ -1.08
COPS4-209ENST00000511653 FRAT2O75474 233 aaPredicted RBP8.31□□□□□ -1.08
COPS4-209ENST00000511653 FGFR2P21802 821 aa8.31□□□□□ -1.08
COPS4-209ENST00000511653 BRD2P25440 801 aaKnown RBP8.31□□□□□ -1.08
COPS4-209ENST00000511653 INPP5BP32019 993 aa8.31□□□□□ -1.08
COPS4-209ENST00000511653 HDLBPQ00341 1268 aaKnown RBP8.31□□□□□ -1.08
COPS4-209ENST00000511653 PKDCCQ504Y2 493 aa8.31□□□□□ -1.08
COPS4-209ENST00000511653 C1orf53Q5VUE5 145 aa8.31□□□□□ -1.08
COPS4-209ENST00000511653 FAM83AQ86UY5 434 aa8.31□□□□□ -1.08
COPS4-209ENST00000511653 ERO1BQ86YB8 467 aa8.31□□□□□ -1.08
COPS4-209ENST00000511653 TBC1D22AQ8WUA7 517 aa8.31□□□□□ -1.08
COPS4-209ENST00000511653 ZDHHC15Q96MV8 337 aa8.31□□□□□ -1.08
COPS4-209ENST00000511653 AAASQ9NRG9 546 aa8.31□□□□□ -1.08
COPS4-209ENST00000511653 ALPK3Q96L96 1907 aa8.31□□□□□ -1.08
COPS4-209ENST00000511653 NRG2O14511 850 aaPredicted RBP8.3□□□□□ -1.08
COPS4-209ENST00000511653 AXIN1O15169 862 aa8.3□□□□□ -1.08
COPS4-209ENST00000511653 TLR2O60603 784 aa8.3□□□□□ -1.08
COPS4-209ENST00000511653 DGAT1O75907 488 aa8.3□□□□□ -1.08
COPS4-209ENST00000511653 FXR1P51114 621 aaKnown RBP eCLIP8.3□□□□□ -1.08
COPS4-209ENST00000511653 LACTBP83111 547 aaPredicted RBP8.3□□□□□ -1.08
COPS4-209ENST00000511653 NFIAQ12857 509 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms