RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 KCNJ4P48050 445 aa8.11□□□□□ -1.11
RAB28-207ENST00000511649 MLLT1Q03111 559 aaPredicted RBP8.11□□□□□ -1.11
RAB28-207ENST00000511649 SRSF11Q05519 484 aaKnown RBP8.11□□□□□ -1.11
RAB28-207ENST00000511649 RTN1Q16799 776 aa8.11□□□□□ -1.11
RAB28-207ENST00000511649 MFSD14BQ5SR56 506 aa8.11□□□□□ -1.11
RAB28-207ENST00000511649 LDHAL6AQ6ZMR3 332 aa8.11□□□□□ -1.11
RAB28-207ENST00000511649 ATG9AQ7Z3C6 839 aa8.11□□□□□ -1.11
RAB28-207ENST00000511649 APOBEC3FQ8IUX4 373 aaKnown RBP8.11□□□□□ -1.11
RAB28-207ENST00000511649 TRMT2AQ8IZ69 625 aaKnown RBP8.11□□□□□ -1.11
RAB28-207ENST00000511649 VTI1AQ96AJ9 217 aa8.11□□□□□ -1.11
RAB28-207ENST00000511649 HSH2DQ96JZ2 352 aa8.11□□□□□ -1.11
RAB28-207ENST00000511649 TMEM39BQ9GZU3 492 aa8.11□□□□□ -1.11
RAB28-207ENST00000511649 TDRD3Q9H7E2 651 aaKnown RBP8.11□□□□□ -1.11
RAB28-207ENST00000511649 ZNF70Q9UC06 446 aaPredicted RBP8.11□□□□□ -1.11
RAB28-207ENST00000511649 TNNQ9UQP3 1299 aa8.11□□□□□ -1.11
RAB28-207ENST00000511649 RANBP2P49792 3224 aaKnown RBP8.11□□□□□ -1.11
RAB28-207ENST00000511649 SLURP2P0DP57 97 aa8.1□□□□□ -1.11
RAB28-207ENST00000511649 FGFR3P22607 806 aa8.1□□□□□ -1.11
RAB28-207ENST00000511649 FKBP1AP62942 108 aaKnown RBP8.1□□□□□ -1.11
RAB28-207ENST00000511649 SLFN5Q08AF3 891 aa8.1□□□□□ -1.11
RAB28-207ENST00000511649 UBE4AQ14139 1066 aa8.1□□□□□ -1.11
RAB28-207ENST00000511649 RASA3Q14644 834 aa8.1□□□□□ -1.11
RAB28-207ENST00000511649 DLGAP5Q15398 846 aa8.1□□□□□ -1.11
RAB28-207ENST00000511649 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.1□□□□□ -1.11
RAB28-207ENST00000511649 ZNF804AQ7Z570 1209 aa8.1□□□□□ -1.11
RAB28-207ENST00000511649 VEZTQ9HBM0 779 aa8.1□□□□□ -1.11
RAB28-207ENST00000511649 NEUROD4Q9HD90 331 aa8.1□□□□□ -1.11
RAB28-207ENST00000511649 CNNM1Q9NRU3 951 aa8.1□□□□□ -1.11
RAB28-207ENST00000511649 SZT2Q5T011 3432 aa8.09□□□□□ -1.11
RAB28-207ENST00000511649 KHNYNO15037 678 aaKnown RBP8.09□□□□□ -1.11
RAB28-207ENST00000511649 MAPTP10636 758 aaKnown RBP8.09□□□□□ -1.11
RAB28-207ENST00000511649 CRKP46108 304 aa8.09□□□□□ -1.11
RAB28-207ENST00000511649 TNP2Q05952 138 aa8.09□□□□□ -1.11
RAB28-207ENST00000511649 HIF1AQ16665 826 aa8.09□□□□□ -1.11
RAB28-207ENST00000511649 CCDC57Q2TAC2 916 aa8.09□□□□□ -1.11
RAB28-207ENST00000511649 APOBEC3HQ6NTF7 200 aaKnown RBP8.09□□□□□ -1.11
RAB28-207ENST00000511649 DZIP1LQ8IYY4 767 aaKnown RBP8.09□□□□□ -1.11
RAB28-207ENST00000511649 ZNF280CQ8ND82 737 aa8.09□□□□□ -1.11
RAB28-207ENST00000511649 MYO19Q96H55 970 aa8.09□□□□□ -1.11
RAB28-207ENST00000511649 SUSD3Q96L08 255 aa8.09□□□□□ -1.11
RAB28-207ENST00000511649 CHMP4AQ9BY43 222 aa8.09□□□□□ -1.11
RAB28-207ENST00000511649 C9orf78Q9NZ63 289 aaPredicted RBP8.09□□□□□ -1.11
RAB28-207ENST00000511649 HCN2Q9UL51 889 aa8.09□□□□□ -1.11
RAB28-207ENST00000511649 TTF2Q9UNY4 1162 aaKnown RBP8.09□□□□□ -1.11
RAB28-207ENST00000511649 PTPRFP10586 1907 aa8.09□□□□□ -1.11
RAB28-207ENST00000511649 RFX7Q2KHR2 1363 aa8.09□□□□□ -1.12
RAB28-207ENST00000511649 ATRNL1Q5VV63 1379 aa8.09□□□□□ -1.12
RAB28-207ENST00000511649 SIPA1L1O43166 1804 aa8.08□□□□□ -1.12
RAB28-207ENST00000511649 PHIPQ8WWQ0 1821 aa8.08□□□□□ -1.12
RAB28-207ENST00000511649 TCP10L2B9ZVM9 353 aa8.08□□□□□ -1.12
RAB28-207ENST00000511649 EFSO43281 561 aa8.08□□□□□ -1.12
RAB28-207ENST00000511649 HIBADHP31937 336 aaKnown RBP8.08□□□□□ -1.12
RAB28-207ENST00000511649 CHAF1AQ13111 956 aaPredicted RBP8.08□□□□□ -1.12
RAB28-207ENST00000511649 CRHR2Q13324 411 aa8.08□□□□□ -1.12
RAB28-207ENST00000511649 VGLL4Q14135 290 aa8.08□□□□□ -1.12
RAB28-207ENST00000511649 NOM1Q5C9Z4 860 aaKnown RBP8.08□□□□□ -1.12
RAB28-207ENST00000511649 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.08□□□□□ -1.122e-7■□□□□ 9.2
RAB28-207ENST00000511649 BRI3BPQ8WY22 251 aa8.08□□□□□ -1.12
RAB28-207ENST00000511649 ELP3Q9H9T3 547 aa8.08□□□□□ -1.12
RAB28-207ENST00000511649 HDAC9Q9UKV0 1011 aa8.08□□□□□ -1.12
RAB28-207ENST00000511649 PA2G4Q9UQ80 394 aaKnown RBP8.08□□□□□ -1.12
RAB28-207ENST00000511649 SNCAIPQ9Y6H5 919 aa8.08□□□□□ -1.12
RAB28-207ENST00000511649 DOCK2Q92608 1830 aa8.08□□□□□ -1.12
RAB28-207ENST00000511649 MYH2Q9UKX2 1941 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 MROH5Q6ZUA9 1318 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 PDE8BO95263 885 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 CTGFP29279 349 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 ADORA1P30542 326 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 TYRO3Q06418 890 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 NFIAQ12857 509 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 OTOP1Q7RTM1 612 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 ARMC9Q7Z3E5 817 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 FAM43AQ8N2R8 423 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 ZNF384Q8TF68 577 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 COL26A1Q96A83 441 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 MKNK1Q9BUB5 465 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 ARHGAP39Q9C0H5 1083 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.07□□□□□ -1.122e-6■■■■■ 96.1
RAB28-207ENST00000511649 PPP2R3BQ9Y5P8 575 aa8.07□□□□□ -1.12
RAB28-207ENST00000511649 MYO5AQ9Y4I1 1855 aaKnown RBP8.06□□□□□ -1.12
RAB28-207ENST00000511649 PTPRCP08575 1304 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 TRIOBPQ9H2D6 2365 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 CARNS1A5YM72 827 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 TGFBR3LH3BV60 316 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 FKTNO75072 461 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 ZBTB48P10074 688 aaPredicted RBP8.06□□□□□ -1.12
RAB28-207ENST00000511649 PRDX5P30044 214 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 MAP2K3P46734 347 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 MMP14P50281 582 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 RBM5P52756 815 aaKnown RBP eCLIP8.06□□□□□ -1.12
RAB28-207ENST00000511649 CTBSQ01459 385 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 MOGSQ13724 837 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 LAMC2Q13753 1193 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 TAF7LQ5H9L4 462 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 METTL24Q5JXM2 366 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 IER5Q5VY09 327 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 ZFPM1Q8IX07 1006 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 CD99L2Q8TCZ2 262 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 OPTNQ96CV9 577 aa8.06□□□□□ -1.12
RAB28-207ENST00000511649 MEIS3Q99687 375 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms