RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 TSGA10IPQ3SY00 556 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 TMEM67Q5HYA8 995 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 GPATCH4Q5T3I0 446 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 CHST3Q7LGC8 479 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 NCAPG2Q86XI2 1143 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 MB21D2Q8IYB1 491 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 SLAIN1Q8ND83 568 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 REPS2Q8NFH8 660 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 SOCS4Q8WXH5 440 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 NUDT12Q9BQG2 462 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 MTA3Q9BTC8 594 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 SLC38A10Q9HBR0 1119 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 GPCPD1Q9NPB8 672 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 ZNF214Q9UL59 606 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 IVNS1ABPQ9Y6Y0 642 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 MYH4Q9Y623 1939 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 SLC15A5A6NIM6 579 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 ATP2A1O14983 1001 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 PRC1O43663 620 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 EIF5BO60841 1220 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 XRCC5P13010 732 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 PTPREP23469 700 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 GRK4P32298 578 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 HSPA4P34932 840 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 SLC16A2P36021 539 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 RGS2P41220 211 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 OAZ1P54368 228 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 ANTXR2P58335 489 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 ZNF543Q08ER8 600 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 WTAPQ15007 396 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 ASPRV1Q53RT3 343 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 MORN1Q5T089 497 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 TTBK2Q6IQ55 1244 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 BTNL9Q6UXG8 535 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 RASGRP2Q7LDG7 609 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 RIOX2Q8IUF8 465 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 ABRAQ8N0Z2 381 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 CPXCR1Q8N123 301 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 TMTC2Q8N394 836 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 IGDCC4Q8TDY8 1250 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 PXYLP1Q8TE99 480 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 SH3TC2Q8TF17 1288 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 KCNB2Q92953 911 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 ARMC5Q96C12 935 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 TMEM87BQ96K49 555 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 TEX13BQ9BXU2 312 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 RAVER2Q9HCJ3 691 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 BIN2Q9UBW5 565 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 PRR12Q9ULL5 1215 aa8.37□□□□□ -1.07
PDLIM5-215ENST00000511586 HMGB1P09429 215 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 PARP1P09874 1014 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 FCER1AP12319 257 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 CYP2B6P20813 491 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 SLC4A3P48751 1232 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 UBXN2AP68543 259 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 MAP2K5Q13163 448 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 GRB14Q14449 540 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 IFFO2Q5TF58 517 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 SYDE2Q5VT97 1194 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 SNRNP48Q6IEG0 339 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 CATIPQ7Z7H3 387 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 DPP9Q86TI2 863 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 TRMT44Q8IYL2 757 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 RASEFQ8IZ41 740 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 USP6NLQ92738 828 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 ZNF333Q96JL9 665 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 NEK1Q96PY6 1258 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 USP26Q9BXU7 913 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 SLC5A4Q9NY91 659 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 RLFQ13129 1914 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 ZSWIM8A7E2V4 1837 aa8.36□□□□□ -1.07
PDLIM5-215ENST00000511586 CAPN15O75808 1086 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 GOLGA8HP0CJ92 632 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 ELNP15502 786 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 ADORA2AP29274 412 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 SNAP25P60880 206 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 KCTD2Q14681 263 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 TKFCQ3LXA3 575 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 ADCK5Q3MIX3 580 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 CCDC174Q6PII3 467 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 NFXL1Q6ZNB6 911 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 DHX32Q7L7V1 743 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 CHST13Q8NET6 341 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 MMP19Q99542 508 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 APBA2Q99767 749 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 UBA5Q9GZZ9 404 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 RANBP17Q9H2T7 1088 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 LY9Q9HBG7 655 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 SENP2Q9HC62 589 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 FBXO40Q9UH90 709 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 PNMA2Q9UL42 364 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 RIPK3Q9Y572 518 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 SNX14Q9Y5W7 946 aa8.35□□□□□ -1.07
PDLIM5-215ENST00000511586 A0A0G2JMZ2 1700 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 MGAMO43451 1857 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 ZNF536O15090 1300 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 WDR19Q8NEZ3 1342 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 PALM3A6NDB9 673 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 CCDC69A6NI79 296 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 KLRF2D3W0D1 207 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms