RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 PPME1Q9Y570 386 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 MARF1Q9Y4F3 1742 aaKnown RBP10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 PNMA6EA0A0J9YXQ4 647 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 RRN3P2A6NIE6 340 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 GH1P01241 217 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 BRAPQ7Z569 592 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 MSANTD4Q8NCY6 345 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 KLHDC4Q8TBB5 520 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 SCFD2Q8WU76 684 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 RSPH1Q8WYR4 309 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 BICD1Q96G01 975 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 PRDM10Q9NQV6 1147 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 TRPC6Q9Y210 931 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 ATF7P17544 494 aaPredicted RBP10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 CA8P35219 290 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 SPRYD7Q5W111 196 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 SNRNP48Q6IEG0 339 aaKnown RBP10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 ATP2B1P20020 1258 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 NOL9Q5SY16 702 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 SLC4A9Q96Q91 983 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 MAP3K14Q99558 947 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 ZMYM6O95789 1325 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 CRYBG1Q9Y4K1 1723 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 GOLGA6L19H0YKK7 550 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 PDHXO00330 501 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 SLC26A4O43511 780 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 ADORA1P30542 326 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 HMGCS2P54868 508 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 TBC1D9Q6ZT07 1266 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 KCTD17Q8N5Z5 321 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 SCAND2PQ9GZW5 306 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 PDCL3Q9H2J4 239 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 TBC1D22BQ9NU19 505 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 STK39Q9UEW8 545 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 PNMA6FA0A0J9YX94 578 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 BECN2A8MW95 431 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 KLRF2D3W0D1 207 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 ZBTB22O15209 634 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 GDF11O95390 407 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 PLCD1P51178 756 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 SLC8A3P57103 927 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 SH3RF3Q8TEJ3 882 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 PUF60Q9UHX1 559 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 STRCP1A6NGW2 1772 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 HMGCRP04035 888 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 PSAPP07602 524 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 SFNP31947 248 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 FCHSD1Q86WN1 690 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 CCDC82Q8N4S0 544 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 C7orf31Q8N865 590 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 TCHPQ9BT92 498 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 FTOQ9C0B1 505 aaKnown RBP eCLIP10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 MSRAQ9UJ68 235 aa10.94□□□□□ -0.66
POLR2J3-215ENST00000511313 LAD1O00515 517 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 OFD1O75665 1012 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 CCDC172P0C7W6 258 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 SH3GLB2Q9NR46 395 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 USP25Q9UHP3 1055 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 PALD1Q9ULE6 856 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 YARSP54577 528 aaKnown RBP10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 LAMC2Q13753 1193 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 FAM110CQ1W6H9 321 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 NOM1Q5C9Z4 860 aaKnown RBP10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 CREB3L3Q68CJ9 461 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 HS2ST1Q7LGA3 356 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 FAM114A1Q8IWE2 563 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 ALG1Q9BT22 464 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 CIZ1Q9ULV3 898 aaPredicted RBP10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 THSD7AQ9UPZ6 1657 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 NFKBIEO00221 500 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 PRDX5P30044 214 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 MIER3Q7Z3K6 550 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 APBA2Q99767 749 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 GAS7O60861 476 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 AKR1A1P14550 325 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 CHMLP26374 656 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 PSMC4P43686 418 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 KRT76Q01546 638 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 RILPL1Q5EBL4 403 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 CT47A1Q5JQC4 288 aaPredicted RBP10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 SYCP3Q8IZU3 236 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 VTA1Q9NP79 307 aa10.93□□□□□ -0.66
POLR2J3-215ENST00000511313 USP54Q70EL1 1684 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 ARHGEF35A5YM69 484 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 MYL3P08590 195 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 FBXO46Q6PJ61 603 aaPredicted RBP10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 URGCPQ8TCY9 931 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 PCMTD1Q96MG8 357 aaPredicted RBP10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 NACC1Q96RE7 527 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 FLT1P17948 1338 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 STX10O60499 249 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 FAM13AO94988 1023 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 MBD3O95983 291 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 YWHAEP62258 255 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 DCP1AQ9NPI6 582 aaPredicted RBP10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 ADCY3O60266 1144 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 KRT13P13646 458 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 P4HA1P13674 534 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 C12orf60Q5U649 245 aa10.92□□□□□ -0.66
POLR2J3-215ENST00000511313 ZNF654Q8IZM8 581 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms