RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 GRB14Q14449 540 aa18.28■□□□□ 0.52
SH3TC1-220ENST00000511002 RALYLQ86SE5 291 aaKnown RBP18.28■□□□□ 0.52
SH3TC1-220ENST00000511002 MB21D2Q8IYB1 491 aaPredicted RBP18.28■□□□□ 0.52
SH3TC1-220ENST00000511002 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
SH3TC1-220ENST00000511002 DEFB118Q96PH6 123 aa18.28■□□□□ 0.52
SH3TC1-220ENST00000511002 APBA2Q99767 749 aa18.28■□□□□ 0.52
SH3TC1-220ENST00000511002 CWC22Q9HCG8 908 aaKnown RBP18.28■□□□□ 0.52
SH3TC1-220ENST00000511002 PAK6Q9NQU5 681 aaPredicted RBP18.28■□□□□ 0.52
SH3TC1-220ENST00000511002 SLC15A5A6NIM6 579 aa18.27■□□□□ 0.52
SH3TC1-220ENST00000511002 VWA5AO00534 786 aa18.27■□□□□ 0.52
SH3TC1-220ENST00000511002 XRCC5P13010 732 aaKnown RBP18.27■□□□□ 0.52
SH3TC1-220ENST00000511002 ZKSCAN1P17029 563 aaPredicted RBP18.27■□□□□ 0.52
SH3TC1-220ENST00000511002 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.52
SH3TC1-220ENST00000511002 MB21D1Q8N884 522 aa18.27■□□□□ 0.52
SH3TC1-220ENST00000511002 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.27■□□□□ 0.525e-8■■■□□ 18
SH3TC1-220ENST00000511002 ZNF214Q9UL59 606 aaPredicted RBP18.27■□□□□ 0.52
SH3TC1-220ENST00000511002 ZNF236Q9UL36 1845 aa18.27■□□□□ 0.52
SH3TC1-220ENST00000511002 ZNFX1Q9P2E3 1918 aaKnown RBP18.27■□□□□ 0.51
SH3TC1-220ENST00000511002 MCCP23508 829 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 NT5C2P49902 561 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 ANTXR2P58335 489 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 TSGA10IPQ3SY00 556 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 MAP3K21Q5TCX8 1036 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 SLFN13Q68D06 897 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 CHST3Q7LGC8 479 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 NCAPG2Q86XI2 1143 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 GMCL1P1Q8NEA9 526 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 SHCBP1Q8NEM2 672 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 SLF1Q9BQI6 1058 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 TCP11L1Q9NUJ3 509 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 STX8Q9UNK0 236 aa18.26■□□□□ 0.51
SH3TC1-220ENST00000511002 EIF5BO60841 1220 aaKnown RBP18.25■□□□□ 0.51
SH3TC1-220ENST00000511002 COBLO75128 1261 aa18.25■□□□□ 0.51
SH3TC1-220ENST00000511002 SGPL1O95470 568 aa18.25■□□□□ 0.51
SH3TC1-220ENST00000511002 PRKAR2AP13861 404 aaKnown RBP18.25■□□□□ 0.51
SH3TC1-220ENST00000511002 ADORA2AP29274 412 aa18.25■□□□□ 0.51
SH3TC1-220ENST00000511002 NOVP48745 357 aa18.25■□□□□ 0.51
SH3TC1-220ENST00000511002 CACNB2Q08289 660 aaPredicted RBP18.25■□□□□ 0.51
SH3TC1-220ENST00000511002 RCSD1Q6JBY9 416 aa18.25■□□□□ 0.51
SH3TC1-220ENST00000511002 UBE2Q1Q7Z7E8 422 aa18.25■□□□□ 0.51
SH3TC1-220ENST00000511002 ZSCAN10Q96SZ4 725 aaPredicted RBP18.25■□□□□ 0.51
SH3TC1-220ENST00000511002 IVNS1ABPQ9Y6Y0 642 aa18.25■□□□□ 0.51
SH3TC1-220ENST00000511002 TNKSO95271 1327 aa18.24■□□□□ 0.51
SH3TC1-220ENST00000511002 CCND3P30281 292 aaPredicted RBP18.24■□□□□ 0.51
SH3TC1-220ENST00000511002 KRT32Q14532 448 aa18.24■□□□□ 0.51
SH3TC1-220ENST00000511002 IQCA1Q86XH1 822 aa18.24■□□□□ 0.51
SH3TC1-220ENST00000511002 RIOX2Q8IUF8 465 aa18.24■□□□□ 0.51
SH3TC1-220ENST00000511002 ENAHQ8N8S7 591 aaPredicted RBP18.24■□□□□ 0.51
SH3TC1-220ENST00000511002 KIFC2Q96AC6 838 aa18.24■□□□□ 0.51
SH3TC1-220ENST00000511002 JAKMIP1Q96N16 626 aaKnown RBP18.24■□□□□ 0.51
SH3TC1-220ENST00000511002 NEK1Q96PY6 1258 aa18.24■□□□□ 0.51
SH3TC1-220ENST00000511002 UBAC1Q9BSL1 405 aa18.24■□□□□ 0.51
SH3TC1-220ENST00000511002 SYNPO2Q9UMS6 1093 aa18.24■□□□□ 0.51
SH3TC1-220ENST00000511002 MTMR7Q9Y216 660 aa18.24■□□□□ 0.51
SH3TC1-220ENST00000511002 RPTORQ8N122 1335 aa18.23■□□□□ 0.51
SH3TC1-220ENST00000511002 PRC1O43663 620 aa18.23■□□□□ 0.51
SH3TC1-220ENST00000511002 IGHA2P01877 340 aa18.23■□□□□ 0.51
SH3TC1-220ENST00000511002 HOXC6P09630 235 aa18.23■□□□□ 0.51
SH3TC1-220ENST00000511002 CPA1P15085 419 aa18.23■□□□□ 0.51
SH3TC1-220ENST00000511002 TMEM47Q9BQJ4 181 aa18.23■□□□□ 0.51
SH3TC1-220ENST00000511002 CRISPLD2Q9H0B8 497 aa18.23■□□□□ 0.51
SH3TC1-220ENST00000511002 HMX1Q9NP08 348 aaPredicted RBP18.23■□□□□ 0.51
SH3TC1-220ENST00000511002 RIPK3Q9Y572 518 aa18.23■□□□□ 0.51
SH3TC1-220ENST00000511002 TOP1P11387 765 aaKnown RBP18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 BMP3P12645 472 aa18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 CYP2C19P33261 490 aa18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 MCM5P33992 734 aa18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 STAT3P40763 770 aa18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 SEC23AQ15436 765 aa18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 PPP4R3BQ5MIZ7 849 aa18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 KCTD1Q719H9 257 aa18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 CPXCR1Q8N123 301 aa18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 DIS3LQ8TF46 1054 aaKnown RBP18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 TCEANC2Q96MN5 208 aa18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 MROH8Q9H579 483 aa18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 RAVER2Q9HCJ3 691 aaKnown RBP18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 GPHNQ9NQX3 736 aaPredicted RBP18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 FEM1BQ9UK73 627 aa18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 ISY1Q9ULR0 285 aaKnown RBP18.22■□□□□ 0.51
SH3TC1-220ENST00000511002 FRMPD3Q5JV73 1810 aa18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 PLXNA1Q9UIW2 1896 aa18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 TMEM232C9JQI7 657 aa18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 IFIT3O14879 490 aaKnown RBP18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 FARP2O94887 1054 aaPredicted RBP18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 TFRCP02786 760 aaKnown RBP18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 SNAP25P60880 206 aa18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 DGKHQ86XP1 1220 aa18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 PRPF38AQ8NAV1 312 aaKnown RBP18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 TRPV1Q8NER1 839 aa18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 GMCL1Q96IK5 515 aa18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 LRRC2Q9BYS8 371 aa18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 BACH2Q9BYV9 841 aa18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 SENP2Q9HC62 589 aa18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 SMCHD1A6NHR9 2005 aa18.21■□□□□ 0.51
SH3TC1-220ENST00000511002 STRNO43815 780 aa18.2■□□□□ 0.5
SH3TC1-220ENST00000511002 SLC25A27O95847 323 aa18.2■□□□□ 0.5
SH3TC1-220ENST00000511002 PGK2P07205 417 aa18.2■□□□□ 0.5
SH3TC1-220ENST00000511002 TAL1P17542 331 aaPredicted RBP18.2■□□□□ 0.5
SH3TC1-220ENST00000511002 SLC1A4P43007 532 aa18.2■□□□□ 0.5
SH3TC1-220ENST00000511002 SLC4A3P48751 1232 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms