RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 NT5C3AQ9H0P0 336 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 DDX25Q9UHL0 483 aaKnown RBP5.78□□□□□ -1.48
PHF3-210ENST00000509876 COL16A1Q07092 1604 aaPredicted RBP5.78□□□□□ -1.48
PHF3-210ENST00000509876 SPDYE2BA6NHP3 402 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 NEMFO60524 1076 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 PFKFB2O60825 505 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 SPDYE6P0CI01 402 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 AFMP43652 599 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 HMGCS2P54868 508 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 ALX1Q15699 326 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 KRT40Q6A162 431 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 CHADLQ6NUI6 762 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 METTL13Q8N6R0 699 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 FAM212AQ96EL1 285 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 TRERF1Q96PN7 1200 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 GINS2Q9Y248 185 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 LRP6O75581 1613 aa5.78□□□□□ -1.48
PHF3-210ENST00000509876 H0YCG3 227 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 WDR46O15213 610 aaKnown RBP5.77□□□□□ -1.49
PHF3-210ENST00000509876 NEK8Q86SG6 692 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 SNX29Q8TEQ0 813 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 NHSL1Q5SYE7 1610 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 ASB14A6NK59 587 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 SH2B2O14492 632 aaPredicted RBP5.77□□□□□ -1.49
PHF3-210ENST00000509876 MYL3P08590 195 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 CCDC172P0C7W6 258 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 TFDP1Q14186 410 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 STX1AQ16623 288 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 NBPF11Q86T75 865 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 ZBTB8OSQ8IWT0 167 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 SIRT2Q8IXJ6 389 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 RETREG2Q8NC44 543 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 GPKOWQ92917 476 aaPredicted RBP eCLIP5.77□□□□□ -1.49
PHF3-210ENST00000509876 GTF3C6Q969F1 213 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 TRIM47Q96LD4 638 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 ZDHHC15Q96MV8 337 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 PIGSQ96S52 555 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 ACAD9Q9H845 621 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 BICDL2A1A5D9 508 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 FAM196BA6NMK8 535 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 PPP1R2P41236 205 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 UBE2HP62256 183 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 ODR4Q5SWX8 454 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 ZSWIM6Q9HCJ5 1215 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 STRCQ7RTU9 1775 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 GPR75-ASB3A0A0A6YYF3 556 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 hCG_1642624A0A1W2PR95 340 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 PSMA7O14818 248 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 PRPF38AQ8NAV1 312 aaKnown RBP5.77□□□□□ -1.49
PHF3-210ENST00000509876 ATP6V0A1Q93050 837 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 TMEM39BQ9GZU3 492 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 PCDHA4Q9UN74 947 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 PDS5AQ29RF7 1337 aaKnown RBP5.77□□□□□ -1.49
PHF3-210ENST00000509876 ANKRD62A6NC57 917 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 MANSC4A6NHS7 340 aaPredicted RBP5.77□□□□□ -1.49
PHF3-210ENST00000509876 PRKCSHP14314 528 aaPredicted RBP5.77□□□□□ -1.49
PHF3-210ENST00000509876 RPL13P26373 211 aaKnown RBP5.77□□□□□ -1.49
PHF3-210ENST00000509876 PPP1R18Q6NYC8 613 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 RNF26Q9BY78 433 aaPredicted RBP5.77□□□□□ -1.49
PHF3-210ENST00000509876 RNF216Q9NWF9 866 aaPredicted RBP5.77□□□□□ -1.49
PHF3-210ENST00000509876 MYCP01106 439 aaPredicted RBP5.77□□□□□ -1.49
PHF3-210ENST00000509876 GNAT1P11488 350 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 RFX5P48382 616 aaPredicted RBP5.77□□□□□ -1.49
PHF3-210ENST00000509876 COG2Q14746 738 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 NFKBIBQ15653 356 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 STXBP2Q15833 593 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 RNF214Q8ND24 703 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 ZNF577Q9BSK1 485 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 RAVER2Q9HCJ3 691 aaKnown RBP5.77□□□□□ -1.49
PHF3-210ENST00000509876 KCNJ14Q9UNX9 436 aa5.77□□□□□ -1.49
PHF3-210ENST00000509876 SORBS3O60504 671 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 SETQ01105 290 aaPredicted RBP5.76□□□□□ -1.49
PHF3-210ENST00000509876 TPH2Q8IWU9 490 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 DEPTORQ8TB45 409 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 UBE2Q2LH0YL09 131 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 CALUO43852 315 aaPredicted RBP5.76□□□□□ -1.49
PHF3-210ENST00000509876 ORC4O43929 436 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 SBK1Q52WX2 424 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 ERO1BQ86YB8 467 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 TBC1D5Q92609 795 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 MTA3Q9BTC8 594 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 FRMD4BQ9Y2L6 1034 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 SALL1Q9NSC2 1324 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 SHPRHQ149N8 1683 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 SLC25A27O95847 323 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 GCFC2P16383 781 aaKnown RBP5.76□□□□□ -1.49
PHF3-210ENST00000509876 STAT3P40763 770 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 CETN2P41208 172 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 C12orf60Q5U649 245 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 CCDC155Q8N6L0 562 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 GPRC5AQ8NFJ5 357 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 PUF60Q9UHX1 559 aaKnown RBP5.76□□□□□ -1.49
PHF3-210ENST00000509876 LRFN2Q9ULH4 789 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 MYO6Q9UM54 1294 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 CYP21A2P08686 494 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 AP3B2Q13367 1082 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 ANO1Q5XXA6 986 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 CMTR1Q8N1G2 835 aaKnown RBP5.76□□□□□ -1.49
PHF3-210ENST00000509876 RNF146Q9NTX7 359 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 USP25Q9UHP3 1055 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms