RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 PPP4CP60510 307 aa20.25■□□□□ 0.83
CCHCR1-228ENST00000509552 WWC2Q6AWC2 1192 aa20.25■□□□□ 0.83
CCHCR1-228ENST00000509552 RAD9BQ6WBX8 426 aa20.25■□□□□ 0.83
CCHCR1-228ENST00000509552 USP17L1Q7RTZ2 530 aa20.25■□□□□ 0.83
CCHCR1-228ENST00000509552 HEATR3Q7Z4Q2 680 aa20.25■□□□□ 0.83
CCHCR1-228ENST00000509552 DAGLBQ8NCG7 672 aa20.25■□□□□ 0.83
CCHCR1-228ENST00000509552 RASGRP4Q8TDF6 673 aa20.25■□□□□ 0.83
CCHCR1-228ENST00000509552 CCDC12Q8WUD4 166 aaPredicted RBP20.25■□□□□ 0.83
CCHCR1-228ENST00000509552 TGFBRAP1Q8WUH2 860 aa20.25■□□□□ 0.83
CCHCR1-228ENST00000509552 KIFC2Q96AC6 838 aa20.25■□□□□ 0.83
CCHCR1-228ENST00000509552 LZTS2Q9BRK4 669 aa20.25■□□□□ 0.83
CCHCR1-228ENST00000509552 MRPL44Q9H9J2 332 aaKnown RBP20.25■□□□□ 0.83
CCHCR1-228ENST00000509552 COBLO75128 1261 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 PPP2R3AQ06190 1150 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 TMCO3Q6UWJ1 677 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 NGLY1Q96IV0 654 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 PCDHA6Q9UN73 950 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 STX8Q9UNK0 236 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 PCDHA8Q9Y5H6 950 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 M0R2N6 131 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 GYPCP04921 128 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 CDC25AP30304 524 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 RFC4P35249 363 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 COPB1P53618 953 aaKnown RBP20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 TRIM14Q14142 442 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 DIXDC1Q155Q3 683 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 TCP11X2Q5H9J9 407 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 CERS3Q8IU89 383 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 LZTFL1Q9NQ48 299 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 BARHL2Q9NY43 387 aa20.24■□□□□ 0.83
CCHCR1-228ENST00000509552 KCNJ18B7U540 433 aa20.23■□□□□ 0.83
CCHCR1-228ENST00000509552 LAD1O00515 517 aa20.23■□□□□ 0.83
CCHCR1-228ENST00000509552 KIF5CO60282 957 aa20.23■□□□□ 0.83
CCHCR1-228ENST00000509552 UBA7P41226 1012 aa20.23■□□□□ 0.83
CCHCR1-228ENST00000509552 KCNJ12Q14500 433 aa20.23■□□□□ 0.83
CCHCR1-228ENST00000509552 RASGRP2Q7LDG7 609 aa20.23■□□□□ 0.83
CCHCR1-228ENST00000509552 CREBRFQ8IUR6 639 aa20.23■□□□□ 0.83
CCHCR1-228ENST00000509552 VPS16Q9H269 839 aa20.23■□□□□ 0.83
CCHCR1-228ENST00000509552 H7C1D1 291 aa20.22■□□□□ 0.83
CCHCR1-228ENST00000509552 MYL1P05976 194 aa20.22■□□□□ 0.83
CCHCR1-228ENST00000509552 TYW1BQ6NUM6 668 aa20.22■□□□□ 0.83
CCHCR1-228ENST00000509552 TMTC1Q8IUR5 882 aa20.22■□□□□ 0.83
CCHCR1-228ENST00000509552 C8orf37Q96NL8 207 aa20.22■□□□□ 0.83
CCHCR1-228ENST00000509552 MTMR7Q9Y216 660 aa20.22■□□□□ 0.83
CCHCR1-228ENST00000509552 FXR1P51114 621 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCHCR1-228ENST00000509552 PIP4K2BP78356 416 aa20.22■□□□□ 0.83
CCHCR1-228ENST00000509552 INF2Q27J81 1249 aa20.22■□□□□ 0.83
CCHCR1-228ENST00000509552 TMEM47Q9BQJ4 181 aa20.22■□□□□ 0.83
CCHCR1-228ENST00000509552 TAB2Q9NYJ8 693 aa20.22■□□□□ 0.83
CCHCR1-228ENST00000509552 STXBP3O00186 592 aa20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 PRCPP42785 496 aa20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 MAPKAPK5Q8IW41 473 aa20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 GPR161Q8N6U8 529 aaKnown RBP20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 PKNOX2Q96KN3 472 aa20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 NUP88Q99567 741 aaPredicted RBP20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 TTF2Q9UNY4 1162 aaKnown RBP20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 GDAQ9Y2T3 454 aa20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 PALM3A6NDB9 673 aaPredicted RBP20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 CYTH3O43739 400 aa20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 FECHP22830 423 aa20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 STIM1Q13586 685 aa20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 TRAPPC3LQ5T215 181 aa20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 SLC44A5Q8NCS7 719 aa20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 SAP30BPQ9UHR5 308 aaKnown RBP20.21■□□□□ 0.83
CCHCR1-228ENST00000509552 RASA1P20936 1047 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 PRPHP41219 470 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 SEMA3FQ13275 785 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 KCNB1Q14721 858 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 NFIXQ14938 502 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 ADSSL1Q8N142 457 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 CNBD1Q8NA66 436 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 CCSER1Q9C0I3 900 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 ABHD10Q9NUJ1 306 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 MAPK8IP1Q9UQF2 711 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 BTAF1O14981 1849 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 KLRF2D3W0D1 207 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 CYP26C1Q6V0L0 522 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 C15orf52Q6ZUT6 534 aaKnown RBP20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 AMIGO3Q86WK7 504 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 TMEM60Q9H2L4 133 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 FHOD1Q9Y613 1164 aa20.2■□□□□ 0.82
CCHCR1-228ENST00000509552 LTBP4Q8N2S1 1624 aa20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 GRIK5Q16478 980 aa20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 NAALADL2Q58DX5 795 aa20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 TEX35Q5T0J7 233 aa20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 GOLGA1Q92805 767 aa20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 IRX2Q9BZI1 471 aaPredicted RBP20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 TNRC6CQ9HCJ0 1690 aaKnown RBP20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 KIF20AO95235 890 aa20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 UBXN1Q04323 297 aa20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 SLC35G1Q2M3R5 365 aa20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 SPZ1Q9BXG8 430 aa20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 RTFDC1Q9BY42 306 aaPredicted RBP20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 NAV1Q8NEY1 1877 aa20.19■□□□□ 0.82
CCHCR1-228ENST00000509552 PP2D1A8MPX8 630 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 PNMA6AP0CW24 399 aaPredicted RBP20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 BTDP43251 543 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 NAPAP54920 295 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 TUBB2AQ13885 445 aa20.18■□□□□ 0.82
CCHCR1-228ENST00000509552 RSRC2Q7L4I2 434 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms