RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PPP1R9AQ9ULJ8 1098 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 STX8Q9UNK0 236 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 MTMR7Q9Y216 660 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 SMCHD1A6NHR9 2005 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 E7EWF7 191 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 ZBED4O75132 1171 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 SLC25A27O95847 323 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 FCER1AP12319 257 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 CAPN2P17655 700 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 ADORA2AP29274 412 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 CNGA1P29973 690 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 STAT3P40763 770 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 GRB14Q14449 540 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 TMEM132BQ14DG7 1078 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 SLFN13Q68D06 897 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 RUFY2Q8WXA3 655 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 USP6NLQ92738 828 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 ZKSCAN3Q9BRR0 538 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 HTATIP2Q9BUP3 242 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 USP26Q9BXU7 913 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 PAK6Q9NQU5 681 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 PDE4DIPQ5VU43 2346 aa10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 TNRC18O15417 2968 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-213ENST00000509357 PLXNB2O15031 1838 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 MGAMO43451 1857 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 VWA5AO00534 786 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 ZNF213O14771 459 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 BMP3P12645 472 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 CPA1P15085 419 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 SLC1A4P43007 532 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 CACNB2Q08289 660 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 KCTD2Q14681 263 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 MFSD6Q6ZSS7 791 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 CHST3Q7LGC8 479 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 MB21D2Q8IYB1 491 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 CPXCR1Q8N123 301 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 PRPF38AQ8NAV1 312 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 MKL1Q969V6 931 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 MMP19Q99542 508 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 ZSWIM5Q9P217 1185 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 FEM1BQ9UK73 627 aa10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 U3KPZ7 1027 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-213ENST00000509357 TMEM232C9JQI7 657 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 KDM4AO75164 1064 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 MCCP23508 829 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 CCND3P30281 292 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 HSPA4P34932 840 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 COPB2P35606 906 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 SEC23AQ15436 765 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 SNRNP48Q6IEG0 339 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 NECAB2Q7Z6G3 386 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 RIOX2Q8IUF8 465 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 ABRAQ8N0Z2 381 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 GMCL1P1Q8NEA9 526 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 NPLOC4Q8TAT6 608 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 RNF41Q9H4P4 317 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 FLRT1Q9NZU1 646 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 SYNPO2Q9UMS6 1093 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 SNX14Q9Y5W7 946 aa10.29□□□□□ -0.76
PDLIM5-213ENST00000509357 DOCK3Q8IZD9 2030 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 HOXC6P09630 235 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 CYP2C19P33261 490 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 IMMTQ16891 758 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 CCDC96Q2M329 555 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 MAP3K21Q5TCX8 1036 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 CHURC1Q8WUH1 139 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 DDX11Q96FC9 970 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 PAWRQ96IZ0 340 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 TCEANC2Q96MN5 208 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 TEX13BQ9BXU2 312 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 CRISPLD2Q9H0B8 497 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 RAVER2Q9HCJ3 691 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 CTNNA3Q9UI47 895 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 ADAMTS5Q9UNA0 930 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 NR2E3Q9Y5X4 410 aa10.28□□□□□ -0.76
PDLIM5-213ENST00000509357 EVI5O60447 810 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 COBLO75128 1261 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 MYCNP04198 464 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 PGK2P07205 417 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 PCP11498 1178 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 STAT2P52630 851 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 SLC35G1Q2M3R5 365 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 TSGA10IPQ3SY00 556 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 KCTD1Q719H9 257 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 FAM160B2Q86V87 743 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 ENAHQ8N8S7 591 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 ANKLE1Q8NAG6 615 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 DIS3LQ8TF46 1054 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 ESR2Q92731 530 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 KIF2CQ99661 725 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 TMEM47Q9BQJ4 181 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 LRRC2Q9BYS8 371 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 TCP11L1Q9NUJ3 509 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 ZNF214Q9UL59 606 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 LCTP09848 1927 aa10.27□□□□□ -0.77
PDLIM5-213ENST00000509357 H0YGN5 161 aa10.26□□□□□ -0.77
PDLIM5-213ENST00000509357 MSCO60682 206 aa10.26□□□□□ -0.77
PDLIM5-213ENST00000509357 FDX1P10109 184 aa10.26□□□□□ -0.77
PDLIM5-213ENST00000509357 TOP1P11387 765 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-213ENST00000509357 TAL1P17542 331 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms