RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 ZNF213O14771 459 aa22.03■■□□□ 1.12
UBE3D-207ENST00000509102 FGRP09769 529 aa22.03■■□□□ 1.12
UBE3D-207ENST00000509102 CNGA1P29973 690 aa22.03■■□□□ 1.12
UBE3D-207ENST00000509102 NT5C2P49902 561 aa22.03■■□□□ 1.12
UBE3D-207ENST00000509102 STAT2P52630 851 aa22.03■■□□□ 1.12
UBE3D-207ENST00000509102 HAND2P61296 217 aa22.03■■□□□ 1.12
UBE3D-207ENST00000509102 SNRNP48Q6IEG0 339 aaKnown RBP22.03■■□□□ 1.12
UBE3D-207ENST00000509102 FAM160B2Q86V87 743 aa22.03■■□□□ 1.12
UBE3D-207ENST00000509102 PAWRQ96IZ0 340 aaKnown RBP22.03■■□□□ 1.12
UBE3D-207ENST00000509102 NBPF3Q9H094 633 aa22.03■■□□□ 1.12
UBE3D-207ENST00000509102 INCENPQ9NQS7 918 aa22.03■■□□□ 1.12
UBE3D-207ENST00000509102 FLRT1Q9NZU1 646 aa22.03■■□□□ 1.12
UBE3D-207ENST00000509102 OGDHLQ9ULD0 1010 aa22.03■■□□□ 1.12
UBE3D-207ENST00000509102 NR2E3Q9Y5X4 410 aa22.03■■□□□ 1.12
UBE3D-207ENST00000509102 CCND3P30281 292 aaPredicted RBP22.02■■□□□ 1.12
UBE3D-207ENST00000509102 CYP2C19P33261 490 aa22.02■■□□□ 1.12
UBE3D-207ENST00000509102 AKNAD1Q5T1N1 836 aa22.02■■□□□ 1.12
UBE3D-207ENST00000509102 TTC22Q5TAA0 569 aa22.02■■□□□ 1.12
UBE3D-207ENST00000509102 CPXCR1Q8N123 301 aa22.02■■□□□ 1.12
UBE3D-207ENST00000509102 REPS2Q8NFH8 660 aa22.02■■□□□ 1.12
UBE3D-207ENST00000509102 CTNNA3Q9UI47 895 aa22.02■■□□□ 1.12
UBE3D-207ENST00000509102 TMEM232C9JQI7 657 aa22.01■■□□□ 1.11
UBE3D-207ENST00000509102 ATP2A1O14983 1001 aa22.01■■□□□ 1.11
UBE3D-207ENST00000509102 MCCP23508 829 aa22.01■■□□□ 1.11
UBE3D-207ENST00000509102 SLC4A3P48751 1232 aa22.01■■□□□ 1.11
UBE3D-207ENST00000509102 OAZ1P54368 228 aa22.01■■□□□ 1.11
UBE3D-207ENST00000509102 STAG1Q8WVM7 1258 aa22.01■■□□□ 1.11
UBE3D-207ENST00000509102 ESR2Q92731 530 aa22.01■■□□□ 1.11
UBE3D-207ENST00000509102 SLC38A10Q9HBR0 1119 aa22.01■■□□□ 1.11
UBE3D-207ENST00000509102 IL17RBQ9NRM6 502 aa22.01■■□□□ 1.11
UBE3D-207ENST00000509102 COL11A1P12107 1806 aaPredicted RBP22.01■■□□□ 1.11
UBE3D-207ENST00000509102 NMT2O60551 498 aa22■■□□□ 1.11
UBE3D-207ENST00000509102 COBLO75128 1261 aa22■■□□□ 1.11
UBE3D-207ENST00000509102 PDE4AP27815 886 aa22■■□□□ 1.11
UBE3D-207ENST00000509102 IMMTQ16891 758 aaKnown RBP22■■□□□ 1.11
UBE3D-207ENST00000509102 RUFY2Q8WXA3 655 aa22■■□□□ 1.11
UBE3D-207ENST00000509102 DDX11Q96FC9 970 aa22■■□□□ 1.11
UBE3D-207ENST00000509102 DSCC1Q9BVC3 393 aa22■■□□□ 1.11
UBE3D-207ENST00000509102 TCP11L1Q9NUJ3 509 aa22■■□□□ 1.11
UBE3D-207ENST00000509102 FBXO40Q9UH90 709 aa22■■□□□ 1.11
UBE3D-207ENST00000509102 EVI5O60447 810 aa21.99■■□□□ 1.11
UBE3D-207ENST00000509102 TOP1P11387 765 aaKnown RBP21.99■■□□□ 1.11
UBE3D-207ENST00000509102 CACNB1Q02641 598 aaPredicted RBP21.99■■□□□ 1.11
UBE3D-207ENST00000509102 CCDC96Q2M329 555 aa21.99■■□□□ 1.11
UBE3D-207ENST00000509102 RCSD1Q6JBY9 416 aa21.99■■□□□ 1.11
UBE3D-207ENST00000509102 DCAF4Q8WV16 495 aa21.99■■□□□ 1.11
UBE3D-207ENST00000509102 MAML3Q96JK9 1138 aa21.99■■□□□ 1.11
UBE3D-207ENST00000509102 C11orf49Q9H6J7 331 aa21.99■■□□□ 1.11
UBE3D-207ENST00000509102 DDX20Q9UHI6 824 aaKnown RBP21.99■■□□□ 1.11
UBE3D-207ENST00000509102 MTMR7Q9Y216 660 aa21.99■■□□□ 1.11
UBE3D-207ENST00000509102 DIS3Q9Y2L1 958 aaKnown RBP21.99■■□□□ 1.11
UBE3D-207ENST00000509102 PLA2G6O60733 806 aa21.98■■□□□ 1.11
UBE3D-207ENST00000509102 RAVER2Q9HCJ3 691 aaKnown RBP21.98■■□□□ 1.11
UBE3D-207ENST00000509102 RAD50Q92878 1312 aa21.98■■□□□ 1.11
UBE3D-207ENST00000509102 H0YGN5 161 aa21.97■■□□□ 1.11
UBE3D-207ENST00000509102 CYBAP13498 195 aa21.97■■□□□ 1.11
UBE3D-207ENST00000509102 CCDC178Q5BJE1 867 aa21.97■■□□□ 1.11
UBE3D-207ENST00000509102 LHX8Q68G74 356 aa21.97■■□□□ 1.11
UBE3D-207ENST00000509102 KCTD1Q719H9 257 aa21.97■■□□□ 1.11
UBE3D-207ENST00000509102 IQCA1Q86XH1 822 aa21.97■■□□□ 1.11
UBE3D-207ENST00000509102 CHST13Q8NET6 341 aa21.97■■□□□ 1.11
UBE3D-207ENST00000509102 DIS3LQ8TF46 1054 aaKnown RBP21.97■■□□□ 1.11
UBE3D-207ENST00000509102 CHMP4CQ96CF2 233 aa21.97■■□□□ 1.11
UBE3D-207ENST00000509102 TTC14Q96N46 770 aa21.97■■□□□ 1.11
UBE3D-207ENST00000509102 NRBP1Q9UHY1 535 aa21.97■■□□□ 1.11
UBE3D-207ENST00000509102 PGK2P07205 417 aa21.96■■□□□ 1.11
UBE3D-207ENST00000509102 GSPT1P15170 499 aaKnown RBP21.96■■□□□ 1.11
UBE3D-207ENST00000509102 NOVP48745 357 aa21.96■■□□□ 1.11
UBE3D-207ENST00000509102 TBC1D10CQ8IV04 446 aa21.96■■□□□ 1.11
UBE3D-207ENST00000509102 ANKRD35Q8N283 1001 aa21.96■■□□□ 1.11
UBE3D-207ENST00000509102 TACC3Q9Y6A5 838 aa21.96■■□□□ 1.11
UBE3D-207ENST00000509102 SEPT4O43236 478 aa21.95■■□□□ 1.1
UBE3D-207ENST00000509102 ZNF792Q3KQV3 632 aa21.95■■□□□ 1.1
UBE3D-207ENST00000509102 TMEM47Q9BQJ4 181 aa21.95■■□□□ 1.1
UBE3D-207ENST00000509102 TINF2Q9BSI4 451 aa21.95■■□□□ 1.1
UBE3D-207ENST00000509102 CNNM2Q9H8M5 875 aa21.95■■□□□ 1.1
UBE3D-207ENST00000509102 CNPY2Q9Y2B0 182 aa21.95■■□□□ 1.1
UBE3D-207ENST00000509102 RIPK3Q9Y572 518 aa21.95■■□□□ 1.1
UBE3D-207ENST00000509102 TKFCQ3LXA3 575 aa21.94■■□□□ 1.1
UBE3D-207ENST00000509102 MSL3Q8N5Y2 521 aaKnown RBP21.94■■□□□ 1.1
UBE3D-207ENST00000509102 ARRDC4Q8NCT1 418 aa21.94■■□□□ 1.1
UBE3D-207ENST00000509102 KRT23Q9C075 422 aa21.94■■□□□ 1.1
UBE3D-207ENST00000509102 ACAD9Q9H845 621 aa21.94■■□□□ 1.1
UBE3D-207ENST00000509102 HOMER2Q9NSB8 354 aa21.94■■□□□ 1.1
UBE3D-207ENST00000509102 IGHA2P01877 340 aa21.93■■□□□ 1.1
UBE3D-207ENST00000509102 NEDD4P46934 1319 aa21.93■■□□□ 1.1
UBE3D-207ENST00000509102 PRR12Q9ULL5 1215 aa21.93■■□□□ 1.1
UBE3D-207ENST00000509102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.92■■□□□ 1.1
UBE3D-207ENST00000509102 DGKHQ86XP1 1220 aa21.92■■□□□ 1.1
UBE3D-207ENST00000509102 TRPV1Q8NER1 839 aa21.92■■□□□ 1.1
UBE3D-207ENST00000509102 LAMA4Q16363 1823 aa21.92■■□□□ 1.1
UBE3D-207ENST00000509102 CEP290O15078 2479 aa21.91■■□□□ 1.1
UBE3D-207ENST00000509102 ZNFX1Q9P2E3 1918 aaKnown RBP21.91■■□□□ 1.1
UBE3D-207ENST00000509102 DNM1LO00429 736 aa21.91■■□□□ 1.1
UBE3D-207ENST00000509102 KDM4AO75164 1064 aa21.91■■□□□ 1.1
UBE3D-207ENST00000509102 MNX1P50219 401 aaPredicted RBP21.91■■□□□ 1.1
UBE3D-207ENST00000509102 TRDNQ13061 729 aa21.91■■□□□ 1.1
UBE3D-207ENST00000509102 CCDC174Q6PII3 467 aa21.91■■□□□ 1.1
UBE3D-207ENST00000509102 RNF146Q9NTX7 359 aa21.91■■□□□ 1.1
UBE3D-207ENST00000509102 PNMA2Q9UL42 364 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms