RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 SLFN13Q68D06 897 aa26.19■■□□□ 1.78
PACRGL-220ENST00000508952 SNRNP48Q6IEG0 339 aaKnown RBP26.19■■□□□ 1.78
PACRGL-220ENST00000508952 TEX13BQ9BXU2 312 aa26.19■■□□□ 1.78
PACRGL-220ENST00000508952 RBM27Q9P2N5 1060 aaKnown RBP26.19■■□□□ 1.78
PACRGL-220ENST00000508952 ANAPC4Q9UJX5 808 aa26.19■■□□□ 1.78
PACRGL-220ENST00000508952 DNAH12Q6ZR08 3092 aa26.18■■□□□ 1.78
PACRGL-220ENST00000508952 FGAP02671 866 aa26.18■■□□□ 1.78
PACRGL-220ENST00000508952 SLC4A3P48751 1232 aa26.18■■□□□ 1.78
PACRGL-220ENST00000508952 TICAM2Q86XR7 235 aa26.18■■□□□ 1.78
PACRGL-220ENST00000508952 CPXCR1Q8N123 301 aa26.18■■□□□ 1.78
PACRGL-220ENST00000508952 IL17RBQ9NRM6 502 aa26.18■■□□□ 1.78
PACRGL-220ENST00000508952 FEM1BQ9UK73 627 aa26.18■■□□□ 1.78
PACRGL-220ENST00000508952 ISY1Q9ULR0 285 aaKnown RBP26.18■■□□□ 1.78
PACRGL-220ENST00000508952 RIPK3Q9Y572 518 aa26.18■■□□□ 1.78
PACRGL-220ENST00000508952 RANBP6O60518 1105 aaKnown RBP26.17■■□□□ 1.78
PACRGL-220ENST00000508952 MSCO60682 206 aa26.17■■□□□ 1.78
PACRGL-220ENST00000508952 HSPD1P10809 573 aaKnown RBP26.17■■□□□ 1.78
PACRGL-220ENST00000508952 BMP3P12645 472 aa26.17■■□□□ 1.78
PACRGL-220ENST00000508952 COPB2P35606 906 aa26.17■■□□□ 1.78
PACRGL-220ENST00000508952 FXR1P51114 621 aaKnown RBP eCLIP26.17■■□□□ 1.78
PACRGL-220ENST00000508952 ANO1Q5XXA6 986 aa26.17■■□□□ 1.78
PACRGL-220ENST00000508952 OSBPL3Q9H4L5 887 aa26.17■■□□□ 1.78
PACRGL-220ENST00000508952 STX8Q9UNK0 236 aa26.17■■□□□ 1.78
PACRGL-220ENST00000508952 CTDP1Q9Y5B0 961 aaPredicted RBP26.17■■□□□ 1.78
PACRGL-220ENST00000508952 CCDC171Q6TFL3 1326 aa26.16■■□□□ 1.78
PACRGL-220ENST00000508952 ZBED4O75132 1171 aa26.16■■□□□ 1.78
PACRGL-220ENST00000508952 RAVER2Q9HCJ3 691 aaKnown RBP26.16■■□□□ 1.78
PACRGL-220ENST00000508952 TOMM22Q9NS69 142 aa26.16■■□□□ 1.78
PACRGL-220ENST00000508952 ZMYND8Q9ULU4 1186 aaPredicted RBP26.16■■□□□ 1.78
PACRGL-220ENST00000508952 TMEM232C9JQI7 657 aa26.15■■□□□ 1.78
PACRGL-220ENST00000508952 ORC4O43929 436 aa26.15■■□□□ 1.78
PACRGL-220ENST00000508952 SDSP20132 328 aa26.15■■□□□ 1.78
PACRGL-220ENST00000508952 ZNF792Q3KQV3 632 aa26.15■■□□□ 1.78
PACRGL-220ENST00000508952 PRO3102Q9H379 93 aa26.15■■□□□ 1.78
PACRGL-220ENST00000508952 SLC38A10Q9HBR0 1119 aa26.15■■□□□ 1.78
PACRGL-220ENST00000508952 ATP2A1O14983 1001 aa26.14■■□□□ 1.78
PACRGL-220ENST00000508952 SEPT4O43236 478 aa26.14■■□□□ 1.78
PACRGL-220ENST00000508952 MCCP23508 829 aa26.14■■□□□ 1.78
PACRGL-220ENST00000508952 HAND2P61296 217 aa26.14■■□□□ 1.78
PACRGL-220ENST00000508952 IRX6P78412 446 aaPredicted RBP26.14■■□□□ 1.78
PACRGL-220ENST00000508952 RRP12Q5JTH9 1297 aaKnown RBP26.14■■□□□ 1.78
PACRGL-220ENST00000508952 RASGRP2Q7LDG7 609 aa26.14■■□□□ 1.78
PACRGL-220ENST00000508952 FGRP09769 529 aa26.13■■□□□ 1.77
PACRGL-220ENST00000508952 SYN1P17600 705 aa26.13■■□□□ 1.77
PACRGL-220ENST00000508952 SLC1A4P43007 532 aa26.13■■□□□ 1.77
PACRGL-220ENST00000508952 LRRC26Q2I0M4 334 aa26.13■■□□□ 1.77
PACRGL-220ENST00000508952 PPP4R3BQ5MIZ7 849 aa26.13■■□□□ 1.77
PACRGL-220ENST00000508952 GMCL1Q96IK5 515 aa26.13■■□□□ 1.77
PACRGL-220ENST00000508952 TINF2Q9BSI4 451 aa26.13■■□□□ 1.77
PACRGL-220ENST00000508952 ZMYM6O95789 1325 aa26.13■■□□□ 1.77
PACRGL-220ENST00000508952 SMCHD1A6NHR9 2005 aa26.12■■□□□ 1.77
PACRGL-220ENST00000508952 STAT2P52630 851 aa26.12■■□□□ 1.77
PACRGL-220ENST00000508952 IKQ13123 557 aaPredicted RBP26.12■■□□□ 1.77
PACRGL-220ENST00000508952 GJC2Q5T442 439 aaPredicted RBP26.12■■□□□ 1.77
PACRGL-220ENST00000508952 SENP6Q9GZR1 1112 aaPredicted RBP26.12■■□□□ 1.77
PACRGL-220ENST00000508952 PCDH10Q9P2E7 1040 aa26.12■■□□□ 1.77
PACRGL-220ENST00000508952 MTMR7Q9Y216 660 aa26.12■■□□□ 1.77
PACRGL-220ENST00000508952 KCTD1Q719H9 257 aa26.11■■□□□ 1.77
PACRGL-220ENST00000508952 DIS3Q9Y2L1 958 aaKnown RBP26.11■■□□□ 1.77
PACRGL-220ENST00000508952 DNM1LO00429 736 aa26.1■■□□□ 1.77
PACRGL-220ENST00000508952 MYCNP04198 464 aaPredicted RBP26.1■■□□□ 1.77
PACRGL-220ENST00000508952 TAL1P17542 331 aaPredicted RBP26.1■■□□□ 1.77
PACRGL-220ENST00000508952 CWC27Q6UX04 472 aaKnown RBP26.1■■□□□ 1.77
PACRGL-220ENST00000508952 CHURC1Q8WUH1 139 aa26.1■■□□□ 1.77
PACRGL-220ENST00000508952 DDX11Q96FC9 970 aa26.1■■□□□ 1.77
PACRGL-220ENST00000508952 HOMER2Q9NSB8 354 aa26.1■■□□□ 1.77
PACRGL-220ENST00000508952 LAMA4Q16363 1823 aa26.09■■□□□ 1.77
PACRGL-220ENST00000508952 OAZ1P54368 228 aa26.09■■□□□ 1.77
PACRGL-220ENST00000508952 MFAP1P55081 439 aaKnown RBP26.09■■□□□ 1.77
PACRGL-220ENST00000508952 FAM160B2Q86V87 743 aa26.09■■□□□ 1.77
PACRGL-220ENST00000508952 TBC1D10CQ8IV04 446 aa26.09■■□□□ 1.77
PACRGL-220ENST00000508952 STAG1Q8WVM7 1258 aa26.09■■□□□ 1.77
PACRGL-220ENST00000508952 DIAPH3Q9NSV4 1193 aa26.09■■□□□ 1.77
PACRGL-220ENST00000508952 DNAJC25-GNG10A0A024R161 153 aa26.08■■□□□ 1.77
PACRGL-220ENST00000508952 NOVP48745 357 aa26.08■■□□□ 1.77
PACRGL-220ENST00000508952 ATN1P54259 1190 aaPredicted RBP26.08■■□□□ 1.77
PACRGL-220ENST00000508952 RCSD1Q6JBY9 416 aa26.08■■□□□ 1.77
PACRGL-220ENST00000508952 ARRDC4Q8NCT1 418 aa26.08■■□□□ 1.77
PACRGL-220ENST00000508952 NRBP1Q9UHY1 535 aa26.08■■□□□ 1.77
PACRGL-220ENST00000508952 PDE4AP27815 886 aa26.07■■□□□ 1.76
PACRGL-220ENST00000508952 SNAP25P60880 206 aa26.07■■□□□ 1.76
PACRGL-220ENST00000508952 ANKRD35Q8N283 1001 aa26.07■■□□□ 1.76
PACRGL-220ENST00000508952 CHST13Q8NET6 341 aa26.07■■□□□ 1.76
PACRGL-220ENST00000508952 AGBL1Q96MI9 1066 aa26.07■■□□□ 1.76
PACRGL-220ENST00000508952 FBXO40Q9UH90 709 aa26.07■■□□□ 1.76
PACRGL-220ENST00000508952 MCM3APO60318 1980 aa26.07■■□□□ 1.76
PACRGL-220ENST00000508952 SZT2Q5T011 3432 aa26.07■■□□□ 1.76
PACRGL-220ENST00000508952 KBTBD13C9JR72 458 aa26.06■■□□□ 1.76
PACRGL-220ENST00000508952 FDX1P10109 184 aa26.06■■□□□ 1.76
PACRGL-220ENST00000508952 CCDC96Q2M329 555 aa26.06■■□□□ 1.76
PACRGL-220ENST00000508952 AKNAD1Q5T1N1 836 aa26.06■■□□□ 1.76
PACRGL-220ENST00000508952 MFSD6Q6ZSS7 791 aa26.06■■□□□ 1.76
PACRGL-220ENST00000508952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.06■■□□□ 1.76
PACRGL-220ENST00000508952 GDF15Q99988 308 aa26.06■■□□□ 1.76
PACRGL-220ENST00000508952 TMEM47Q9BQJ4 181 aa26.06■■□□□ 1.76
PACRGL-220ENST00000508952 CNPY2Q9Y2B0 182 aa26.06■■□□□ 1.76
PACRGL-220ENST00000508952 ZNF536O15090 1300 aa26.06■■□□□ 1.76
PACRGL-220ENST00000508952 PLA2G6O60733 806 aa26.05■■□□□ 1.76
PACRGL-220ENST00000508952 ZNF865P0CJ78 1059 aaPredicted RBP26.05■■□□□ 1.76
PACRGL-220ENST00000508952 LRRC41Q15345 812 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms