RNA–Protein interactions for RNA: ENST00000508838.5

AFP-204, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-204ENST00000508838 PDE3AQ14432 1141 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 E2F4Q16254 413 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 SLFNL1Q499Z3 407 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 PRAMEF19Q5SWL8 479 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 C1orf53Q5VUE5 145 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 OLFML2BQ68BL8 750 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 SPTY2D1Q68D10 685 aaPredicted RBP6.76□□□□□ -1.33
AFP-204ENST00000508838 CCSAPQ6IQ19 270 aaPredicted RBP6.76□□□□□ -1.33
AFP-204ENST00000508838 NAA16Q6N069 864 aaPredicted RBP6.76□□□□□ -1.33
AFP-204ENST00000508838 USP17L2Q6R6M4 530 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 SLC39A5Q6ZMH5 540 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 KCTD17Q8N5Z5 321 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 MIGA1Q8NAN2 632 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 KDM4CQ9H3R0 1056 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 RPAP3Q9H6T3 665 aaPredicted RBP6.76□□□□□ -1.33
AFP-204ENST00000508838 RAI14Q9P0K7 980 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 TBX21Q9UL17 535 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 PHF24Q9UPV7 400 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 DOCK5Q9H7D0 1870 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 VPS13AQ96RL7 3174 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 MYO7AQ13402 2215 aa6.76□□□□□ -1.33
AFP-204ENST00000508838 COL4A6Q14031 1691 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 TCRBV5S4A2TA0A5A2 114 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 KIAA0355O15063 1070 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 CTAGE5O15320 804 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 SEPT4O43236 478 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 FOSL2P15408 326 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 PTGS1P23219 599 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 DNAJB2P25686 324 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 ADCYAP1R1P41586 468 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 TLE2Q04725 743 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 SEPT2Q15019 361 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 PKDCCQ504Y2 493 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 SLF2Q8IX21 1173 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 TRMT44Q8IYL2 757 aaKnown RBP6.75□□□□□ -1.33
AFP-204ENST00000508838 ANKK1Q8NFD2 765 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 SSH3Q8TE77 659 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 EAF2Q96CJ1 260 aaPredicted RBP6.75□□□□□ -1.33
AFP-204ENST00000508838 ATG4CQ96DT6 458 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 MAML3Q96JK9 1138 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 ZNF512BQ96KM6 892 aaPredicted RBP6.75□□□□□ -1.33
AFP-204ENST00000508838 DHX36Q9H2U1 1008 aaKnown RBP6.75□□□□□ -1.33
AFP-204ENST00000508838 TMOD4Q9NZQ9 345 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 ASTN1O14525 1302 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 ZBED9Q6R2W3 1325 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 SYNRGQ9UMZ2 1314 aa6.75□□□□□ -1.33
AFP-204ENST00000508838 TMEM265A0A087WTH1 108 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 A0A1W2PQ45 241 aaPredicted RBP6.74□□□□□ -1.33
AFP-204ENST00000508838 A0A1W2PQY0 241 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 GRXCR1A8MXD5 290 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 USP17L15C9J2P7 530 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 USP17L13C9JLJ4 530 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 USP17L11C9JVI0 530 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 USP17L18D6R9N7 530 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 USP17L22D6RA61 530 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 USP17L17D6RBQ6 530 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 USP17L19D6RCP7 530 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 USP17L20D6RJB6 530 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 ARHGEF15O94989 841 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 ZNF865P0CJ78 1059 aaPredicted RBP6.74□□□□□ -1.33
AFP-204ENST00000508838 RLBP1P12271 317 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 ERCC3P19447 782 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 COL9A1P20849 921 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 GSTO1P78417 241 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 FAAP100Q0VG06 881 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 USP17L24Q0WX57 530 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 GTF3C2Q8WUA4 911 aaPredicted RBP6.74□□□□□ -1.33
AFP-204ENST00000508838 FERMT2Q96AC1 680 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 EDC3Q96F86 508 aaKnown RBP6.74□□□□□ -1.33
AFP-204ENST00000508838 NECAB3Q96P71 396 aaPredicted RBP6.74□□□□□ -1.33
AFP-204ENST00000508838 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.74□□□□□ -1.331e-47■■■■□ 26.7
AFP-204ENST00000508838 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.74□□□□□ -1.33
AFP-204ENST00000508838 KATNBL1Q9H079 304 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 SPATC1LQ9H0A9 340 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 GPR108Q9NPR9 543 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 PRDM5Q9NQX1 630 aaPredicted RBP6.74□□□□□ -1.33
AFP-204ENST00000508838 GINM1Q9NU53 330 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 FBXO28Q9NVF7 368 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 SERPINB13Q9UIV8 391 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 ZNF214Q9UL59 606 aaPredicted RBP6.74□□□□□ -1.33
AFP-204ENST00000508838 UMODL1Q5DID0 1318 aa6.74□□□□□ -1.33
AFP-204ENST00000508838 RALGAPA2Q2PPJ7 1873 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 CYP2D7A0A087X1C5 515 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 MSCO60682 206 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 PGK1P00558 417 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 PGK2P07205 417 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 LDHCP07864 332 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 AKR1B1P15121 316 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 TMEM132BQ14DG7 1078 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 ZNF792Q3KQV3 632 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 MFSD14CQ5VZR4 134 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 FOXP4Q8IVH2 680 aaPredicted RBP6.73□□□□□ -1.33
AFP-204ENST00000508838 LCORLQ8N3X6 602 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 SHCBP1Q8NEM2 672 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 RNPC3Q96LT9 517 aaKnown RBP6.73□□□□□ -1.33
AFP-204ENST00000508838 NEUROD6Q96NK8 337 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 FEZ1Q99689 392 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 PBX4Q9BYU1 374 aa6.73□□□□□ -1.33
AFP-204ENST00000508838 API5Q9BZZ5 524 aaKnown RBP6.73□□□□□ -1.33
AFP-204ENST00000508838 C11orf16Q9NQ32 467 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms