RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 KRTAP1-3Q8IUG1 177 aa8.82□□□□□ -1
TOPBP1-206ENST00000508524 OR6P1Q8NGX9 317 aa8.82□□□□□ -1
TOPBP1-206ENST00000508524 MAP6Q96JE9 813 aa8.82□□□□□ -1
TOPBP1-206ENST00000508524 FAM86C1Q9NVL1 165 aa8.82□□□□□ -1
TOPBP1-206ENST00000508524 A0A1W2PQH9 124 aa8.81□□□□□ -1
TOPBP1-206ENST00000508524 SSU72P8A0A1W2PR75 194 aa8.81□□□□□ -1
TOPBP1-206ENST00000508524 USP2O75604 605 aaPredicted RBP8.81□□□□□ -1
TOPBP1-206ENST00000508524 ZNF205O95201 554 aa8.81□□□□□ -1
TOPBP1-206ENST00000508524 TP53P04637 393 aaPredicted RBP8.81□□□□□ -1
TOPBP1-206ENST00000508524 TCF3P15923 654 aa8.81□□□□□ -1
TOPBP1-206ENST00000508524 SPPL2CQ8IUH8 684 aa8.81□□□□□ -1
TOPBP1-206ENST00000508524 GP6Q9HCN6 339 aa8.81□□□□□ -1
TOPBP1-206ENST00000508524 ZMYM5Q9UJ78 669 aa8.81□□□□□ -1
TOPBP1-206ENST00000508524 CBFA2T2O43439 604 aa8.8□□□□□ -1
TOPBP1-206ENST00000508524 PSPNO60542 156 aa8.8□□□□□ -1
TOPBP1-206ENST00000508524 YBX3P16989 372 aaKnown RBP eCLIP8.8□□□□□ -1
TOPBP1-206ENST00000508524 ERCC5P28715 1186 aaPredicted RBP8.8□□□□□ -1
TOPBP1-206ENST00000508524 ZNF445P59923 1031 aa8.8□□□□□ -1
TOPBP1-206ENST00000508524 SHISA4Q96DD7 197 aa8.8□□□□□ -1
TOPBP1-206ENST00000508524 HHIPL1Q96JK4 782 aa8.8□□□□□ -1
TOPBP1-206ENST00000508524 FAM84AQ96KN4 292 aa8.8□□□□□ -1
TOPBP1-206ENST00000508524 DIRC2Q96SL1 478 aa8.8□□□□□ -1
TOPBP1-206ENST00000508524 ZNF451Q9Y4E5 1061 aa8.8□□□□□ -1
TOPBP1-206ENST00000508524 SLC12A7Q9Y666 1083 aa8.8□□□□□ -1
TOPBP1-206ENST00000508524 GSNP06396 782 aa8.79□□□□□ -1
TOPBP1-206ENST00000508524 VAV1P15498 845 aa8.79□□□□□ -1
TOPBP1-206ENST00000508524 CD247P20963 164 aa8.79□□□□□ -1
TOPBP1-206ENST00000508524 FAM169BQ8N8A8 192 aa8.79□□□□□ -1
TOPBP1-206ENST00000508524 FCRL2Q96LA5 508 aaPredicted RBP8.79□□□□□ -1
TOPBP1-206ENST00000508524 DSCC1Q9BVC3 393 aa8.79□□□□□ -1
TOPBP1-206ENST00000508524 NSUN3Q9H649 340 aaKnown RBP8.79□□□□□ -1
TOPBP1-206ENST00000508524 H0Y8X5 98 aa8.78□□□□□ -1
TOPBP1-206ENST00000508524 ATF4P18848 351 aaPredicted RBP8.78□□□□□ -1
TOPBP1-206ENST00000508524 KIR2DL1P43626 348 aaPredicted RBP8.78□□□□□ -1
TOPBP1-206ENST00000508524 KIR2DL2P43627 348 aaPredicted RBP8.78□□□□□ -1
TOPBP1-206ENST00000508524 CEBPAP49715 358 aaPredicted RBP8.78□□□□□ -1
TOPBP1-206ENST00000508524 SNX17Q15036 470 aa8.78□□□□□ -1
TOPBP1-206ENST00000508524 ZNF124Q15973 351 aa8.78□□□□□ -1
TOPBP1-206ENST00000508524 KSR1Q8IVT5 923 aa8.78□□□□□ -1
TOPBP1-206ENST00000508524 CPLX3Q8WVH0 158 aa8.78□□□□□ -1
TOPBP1-206ENST00000508524 BRF1Q92994 677 aa8.78□□□□□ -1
TOPBP1-206ENST00000508524 PHAXQ9H814 394 aaKnown RBP8.78□□□□□ -1
TOPBP1-206ENST00000508524 CWC22Q9HCG8 908 aaKnown RBP8.78□□□□□ -1
TOPBP1-206ENST00000508524 GPR160Q9UJ42 338 aa8.78□□□□□ -1
TOPBP1-206ENST00000508524 STRIP2Q9ULQ0 834 aa8.78□□□□□ -1
TOPBP1-206ENST00000508524 PCDHB10Q9UN67 800 aa8.78□□□□□ -1
TOPBP1-206ENST00000508524 YBX2Q9Y2T7 364 aaKnown RBP8.78□□□□□ -1
TOPBP1-206ENST00000508524 FHOD1Q9Y613 1164 aa8.78□□□□□ -1
TOPBP1-206ENST00000508524 GALK1P51570 392 aa8.77□□□□□ -1.01
TOPBP1-206ENST00000508524 CASP7P55210 303 aa8.77□□□□□ -1.01
TOPBP1-206ENST00000508524 RTP2Q5QGT7 225 aa8.77□□□□□ -1.01
TOPBP1-206ENST00000508524 NLRX1Q86UT6 975 aa8.77□□□□□ -1.01
TOPBP1-206ENST00000508524 HAUS7Q99871 368 aa8.77□□□□□ -1.01
TOPBP1-206ENST00000508524 KCNK12Q9HB15 430 aa8.77□□□□□ -1.01
TOPBP1-206ENST00000508524 AP5S1Q9NUS5 200 aa8.77□□□□□ -1.01
TOPBP1-206ENST00000508524 ERVK13-1Q9NX77 482 aa8.77□□□□□ -1.01
TOPBP1-206ENST00000508524 NRDCO43847 1150 aa8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 ENDOUP21128 410 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 GNPTABQ3T906 1256 aa8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 NOL9Q5SY16 702 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 CEP128Q6ZU80 1094 aa8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 FIBCD1Q8N539 461 aa8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 KLHL6Q8WZ60 621 aa8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 INTS4Q96HW7 963 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 CDADC1Q9BWV3 514 aa8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 SLC12A9Q9BXP2 914 aa8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 KLHL25Q9H0H3 589 aa8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 SLC6A17Q9H1V8 727 aa8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 EPB41L4BQ9H329 900 aa8.76□□□□□ -1.01
TOPBP1-206ENST00000508524 FADS2P1A8MWK0 482 aa8.75□□□□□ -1.01
TOPBP1-206ENST00000508524 ITGA4P13612 1032 aa8.75□□□□□ -1.01
TOPBP1-206ENST00000508524 RBM25P49756 843 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-206ENST00000508524 PPP2R5EQ16537 467 aa8.75□□□□□ -1.01
TOPBP1-206ENST00000508524 FBXO15Q8NCQ5 510 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-206ENST00000508524 BHLHE22Q8NFJ8 381 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-206ENST00000508524 SLC38A3Q99624 504 aa8.75□□□□□ -1.01
TOPBP1-206ENST00000508524 DCP1AQ9NPI6 582 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-206ENST00000508524 TNFRSF10DQ9UBN6 386 aa8.75□□□□□ -1.01
TOPBP1-206ENST00000508524 GPR55Q9Y2T6 319 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-206ENST00000508524 SLC7A5Q01650 507 aa8.74□□□□□ -1.01
TOPBP1-206ENST00000508524 CWF19L1Q69YN2 538 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-206ENST00000508524 SYDE1Q6ZW31 735 aaPredicted RBP8.74□□□□□ -1.01
TOPBP1-206ENST00000508524 IRF2BP1Q8IU81 584 aa8.74□□□□□ -1.01
TOPBP1-206ENST00000508524 ANAPC16Q96DE5 110 aa8.74□□□□□ -1.01
TOPBP1-206ENST00000508524 PLCD4Q9BRC7 762 aa8.74□□□□□ -1.01
TOPBP1-206ENST00000508524 NOL6Q9H6R4 1146 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-206ENST00000508524 A0A087WZG4 1122 aa8.73□□□□□ -1.01
TOPBP1-206ENST00000508524 KRT1P04264 644 aa8.73□□□□□ -1.01
TOPBP1-206ENST00000508524 RTP1P59025 263 aa8.73□□□□□ -1.01
TOPBP1-206ENST00000508524 TCEAL1Q15170 157 aa8.73□□□□□ -1.01
TOPBP1-206ENST00000508524 SLC14A2Q15849 920 aa8.73□□□□□ -1.01
TOPBP1-206ENST00000508524 SLCO6A1Q86UG4 719 aa8.73□□□□□ -1.01
TOPBP1-206ENST00000508524 TMEM52Q8NDY8 209 aa8.73□□□□□ -1.01
TOPBP1-206ENST00000508524 CAPN10Q9HC96 672 aa8.73□□□□□ -1.01
TOPBP1-206ENST00000508524 PODXL2Q9NZ53 605 aa8.73□□□□□ -1.01
TOPBP1-206ENST00000508524 WHRNQ9P202 907 aa8.73□□□□□ -1.01
TOPBP1-206ENST00000508524 TSPAN15O95858 294 aa8.72□□□□□ -1.01
TOPBP1-206ENST00000508524 EPHX1P07099 455 aa8.72□□□□□ -1.01
TOPBP1-206ENST00000508524 JAG1P78504 1218 aa8.72□□□□□ -1.01
TOPBP1-206ENST00000508524 PKN1Q16512 942 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms