RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 ZBTB47Q9UFB7 747 aaPredicted RBP19.29■□□□□ 0.68
LMNA-222ENST00000508500 LTBP2Q14767 1821 aa19.28■□□□□ 0.68
LMNA-222ENST00000508500 LAMA2P24043 3122 aaKnown RBP19.28■□□□□ 0.68
LMNA-222ENST00000508500 LCTP09848 1927 aa19.28■□□□□ 0.68
LMNA-222ENST00000508500 MSCO60682 206 aa19.28■□□□□ 0.68
LMNA-222ENST00000508500 AAMPQ13685 434 aa19.28■□□□□ 0.68
LMNA-222ENST00000508500 GPR153Q6NV75 609 aa19.28■□□□□ 0.68
LMNA-222ENST00000508500 ZNF589Q86UQ0 364 aaPredicted RBP19.28■□□□□ 0.68
LMNA-222ENST00000508500 PRPF38AQ8NAV1 312 aaKnown RBP19.28■□□□□ 0.68
LMNA-222ENST00000508500 GMCL1P1Q8NEA9 526 aa19.28■□□□□ 0.68
LMNA-222ENST00000508500 ANAPC4Q9UJX5 808 aa19.28■□□□□ 0.68
LMNA-222ENST00000508500 SYNPO2Q9UMS6 1093 aa19.28■□□□□ 0.68
LMNA-222ENST00000508500 LAMA4Q16363 1823 aa19.28■□□□□ 0.68
LMNA-222ENST00000508500 NMT2O60551 498 aa19.27■□□□□ 0.68
LMNA-222ENST00000508500 FGRP09769 529 aa19.27■□□□□ 0.68
LMNA-222ENST00000508500 NMIQ13287 307 aaPredicted RBP19.27■□□□□ 0.68
LMNA-222ENST00000508500 ALX1Q15699 326 aa19.27■□□□□ 0.68
LMNA-222ENST00000508500 SLFN13Q68D06 897 aa19.27■□□□□ 0.68
LMNA-222ENST00000508500 SNRNP48Q6IEG0 339 aaKnown RBP19.27■□□□□ 0.68
LMNA-222ENST00000508500 PLEKHM2Q8IWE5 1019 aa19.27■□□□□ 0.68
LMNA-222ENST00000508500 SENP6Q9GZR1 1112 aaPredicted RBP19.27■□□□□ 0.68
LMNA-222ENST00000508500 SLC5A4Q9NY91 659 aa19.27■□□□□ 0.68
LMNA-222ENST00000508500 ATP2A1O14983 1001 aa19.26■□□□□ 0.67
LMNA-222ENST00000508500 SEPT4O43236 478 aa19.26■□□□□ 0.67
LMNA-222ENST00000508500 FGAP02671 866 aa19.26■□□□□ 0.67
LMNA-222ENST00000508500 SLC3A2P08195 630 aaKnown RBP19.26■□□□□ 0.67
LMNA-222ENST00000508500 TAL1P17542 331 aaPredicted RBP19.26■□□□□ 0.67
LMNA-222ENST00000508500 MAGEA10P43363 369 aaPredicted RBP19.26■□□□□ 0.67
LMNA-222ENST00000508500 KCTD2Q14681 263 aa19.26■□□□□ 0.67
LMNA-222ENST00000508500 LRIT3Q3SXY7 679 aa19.26■□□□□ 0.67
LMNA-222ENST00000508500 GJC2Q5T442 439 aaPredicted RBP19.26■□□□□ 0.67
LMNA-222ENST00000508500 RASGRP2Q7LDG7 609 aa19.26■□□□□ 0.67
LMNA-222ENST00000508500 CPXCR1Q8N123 301 aa19.26■□□□□ 0.67
LMNA-222ENST00000508500 KIFC2Q96AC6 838 aa19.26■□□□□ 0.67
LMNA-222ENST00000508500 TEX13BQ9BXU2 312 aa19.26■□□□□ 0.67
LMNA-222ENST00000508500 RWDD1Q9H446 243 aaPredicted RBP19.26■□□□□ 0.67
LMNA-222ENST00000508500 SLC38A10Q9HBR0 1119 aa19.26■□□□□ 0.67
LMNA-222ENST00000508500 RAVER2Q9HCJ3 691 aaKnown RBP19.26■□□□□ 0.67
LMNA-222ENST00000508500 A0A0C4DFX4 3053 aa19.26■□□□□ 0.67
LMNA-222ENST00000508500 DNAJC25-GNG10A0A024R161 153 aa19.25■□□□□ 0.67
LMNA-222ENST00000508500 DNM1LO00429 736 aa19.25■□□□□ 0.67
LMNA-222ENST00000508500 BMP3P12645 472 aa19.25■□□□□ 0.67
LMNA-222ENST00000508500 NOVP48745 357 aa19.25■□□□□ 0.67
LMNA-222ENST00000508500 NUCB1Q02818 461 aa19.25■□□□□ 0.67
LMNA-222ENST00000508500 MCMDC2Q4G0Z9 681 aa19.25■□□□□ 0.67
LMNA-222ENST00000508500 CHD1LQ86WJ1 897 aa19.25■□□□□ 0.67
LMNA-222ENST00000508500 CHMP4CQ96CF2 233 aa19.25■□□□□ 0.67
LMNA-222ENST00000508500 TINF2Q9BSI4 451 aa19.25■□□□□ 0.67
LMNA-222ENST00000508500 FEM1BQ9UK73 627 aa19.25■□□□□ 0.67
LMNA-222ENST00000508500 DIS3Q9Y2L1 958 aaKnown RBP19.25■□□□□ 0.67
LMNA-222ENST00000508500 HSPD1P10809 573 aaKnown RBP19.24■□□□□ 0.67
LMNA-222ENST00000508500 COPB2P35606 906 aa19.24■□□□□ 0.67
LMNA-222ENST00000508500 FGD4Q96M96 766 aa19.24■□□□□ 0.67
LMNA-222ENST00000508500 OSBPL3Q9H4L5 887 aa19.24■□□□□ 0.67
LMNA-222ENST00000508500 TSPY2A6NKD2 308 aa19.23■□□□□ 0.67
LMNA-222ENST00000508500 TRIM6-TRIM34B2RNG4 842 aa19.23■□□□□ 0.67
LMNA-222ENST00000508500 TMEM232C9JQI7 657 aa19.23■□□□□ 0.67
LMNA-222ENST00000508500 ORC4O43929 436 aa19.23■□□□□ 0.67
LMNA-222ENST00000508500 ZBED4O75132 1171 aa19.23■□□□□ 0.67
LMNA-222ENST00000508500 ZNF865P0CJ78 1059 aaPredicted RBP19.23■□□□□ 0.67
LMNA-222ENST00000508500 MCCP23508 829 aa19.23■□□□□ 0.67
LMNA-222ENST00000508500 SLC4A3P48751 1232 aa19.23■□□□□ 0.67
LMNA-222ENST00000508500 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.23■□□□□ 0.67
LMNA-222ENST00000508500 TICAM2Q86XR7 235 aa19.23■□□□□ 0.67
LMNA-222ENST00000508500 RILPL2Q969X0 211 aa19.23■□□□□ 0.67
LMNA-222ENST00000508500 GMCL1Q96IK5 515 aa19.23■□□□□ 0.67
LMNA-222ENST00000508500 ZNF536O15090 1300 aa19.23■□□□□ 0.67
LMNA-222ENST00000508500 SNAI1O95863 264 aaPredicted RBP19.22■□□□□ 0.67
LMNA-222ENST00000508500 SDSP20132 328 aa19.22■□□□□ 0.67
LMNA-222ENST00000508500 ATN1P54259 1190 aaPredicted RBP19.22■□□□□ 0.67
LMNA-222ENST00000508500 TDHQ8IZJ6 230 aa19.22■□□□□ 0.67
LMNA-222ENST00000508500 STX8Q9UNK0 236 aa19.22■□□□□ 0.67
LMNA-222ENST00000508500 ZMYM6O95789 1325 aa19.22■□□□□ 0.67
LMNA-222ENST00000508500 RANBP6O60518 1105 aaKnown RBP19.21■□□□□ 0.67
LMNA-222ENST00000508500 LRRC41Q15345 812 aa19.21■□□□□ 0.67
LMNA-222ENST00000508500 KCTD1Q719H9 257 aa19.21■□□□□ 0.67
LMNA-222ENST00000508500 ARRDC4Q8NCT1 418 aa19.21■□□□□ 0.67
LMNA-222ENST00000508500 LENG1Q96BZ8 264 aaPredicted RBP19.21■□□□□ 0.67
LMNA-222ENST00000508500 NRBP1Q9UHY1 535 aa19.21■□□□□ 0.67
LMNA-222ENST00000508500 SUPT16HQ9Y5B9 1047 aaKnown RBP19.21■□□□□ 0.67
LMNA-222ENST00000508500 CCDC171Q6TFL3 1326 aa19.21■□□□□ 0.67
LMNA-222ENST00000508500 LRRC37A2A6NM11 1700 aa19.2■□□□□ 0.66
LMNA-222ENST00000508500 SLC1A4P43007 532 aa19.2■□□□□ 0.66
LMNA-222ENST00000508500 STAT2P52630 851 aa19.2■□□□□ 0.66
LMNA-222ENST00000508500 OAZ1P54368 228 aa19.2■□□□□ 0.66
LMNA-222ENST00000508500 SNAP25P60880 206 aa19.2■□□□□ 0.66
LMNA-222ENST00000508500 HAND2P61296 217 aa19.2■□□□□ 0.66
LMNA-222ENST00000508500 RCSD1Q6JBY9 416 aa19.2■□□□□ 0.66
LMNA-222ENST00000508500 MAMDC4Q6UXC1 1216 aa19.2■□□□□ 0.66
LMNA-222ENST00000508500 STAG1Q8WVM7 1258 aa19.2■□□□□ 0.66
LMNA-222ENST00000508500 DDX11Q96FC9 970 aa19.2■□□□□ 0.66
LMNA-222ENST00000508500 PLA2G6O60733 806 aa19.19■□□□□ 0.66
LMNA-222ENST00000508500 RTP1P59025 263 aa19.19■□□□□ 0.66
LMNA-222ENST00000508500 SLC39A5Q6ZMH5 540 aa19.19■□□□□ 0.66
LMNA-222ENST00000508500 AGBL1Q96MI9 1066 aa19.19■□□□□ 0.66
LMNA-222ENST00000508500 MYH6P13533 1939 aa19.19■□□□□ 0.66
LMNA-222ENST00000508500 MYCNP04198 464 aaPredicted RBP19.18■□□□□ 0.66
LMNA-222ENST00000508500 ADCYAP1R1P41586 468 aa19.18■□□□□ 0.66
LMNA-222ENST00000508500 SNX17Q15036 470 aa19.18■□□□□ 0.66
LMNA-222ENST00000508500 TTBK2Q6IQ55 1244 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms