RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 C19orf81C9J6K1 198 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 ECM2O94769 699 aaPredicted RBP12.69□□□□□ -0.38
PROM1-207ENST00000508167 MAP3K10Q02779 954 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 PPATQ06203 517 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 GPATCH4Q5T3I0 446 aaKnown RBP12.69□□□□□ -0.38
PROM1-207ENST00000508167 WDR78Q5VTH9 848 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 CST9Q5W186 159 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 RASGRP2Q7LDG7 609 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 SMCR8Q8TEV9 937 aaPredicted RBP12.69□□□□□ -0.38
PROM1-207ENST00000508167 CHURC1Q8WUH1 139 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 NASPP49321 788 aaPredicted RBP12.68□□□□□ -0.38
PROM1-207ENST00000508167 LARP1BQ659C4 914 aaKnown RBP12.68□□□□□ -0.38
PROM1-207ENST00000508167 CPXCR1Q8N123 301 aa12.68□□□□□ -0.38
PROM1-207ENST00000508167 V9GY48 417 aaPredicted RBP12.68□□□□□ -0.38
PROM1-207ENST00000508167 LIG1P18858 919 aa12.68□□□□□ -0.38
PROM1-207ENST00000508167 DGKZQ13574 1117 aa12.68□□□□□ -0.38
PROM1-207ENST00000508167 ASPRV1Q53RT3 343 aa12.68□□□□□ -0.38
PROM1-207ENST00000508167 RGMBQ6NW40 437 aa12.68□□□□□ -0.38
PROM1-207ENST00000508167 CCL15-CCL14A0A0B4J2E2 113 aa12.68□□□□□ -0.38
PROM1-207ENST00000508167 PTPDC1A2A3K4 754 aa12.68□□□□□ -0.38
PROM1-207ENST00000508167 PDHBP11177 359 aa12.68□□□□□ -0.38
PROM1-207ENST00000508167 XBP1P17861 261 aa12.68□□□□□ -0.38
PROM1-207ENST00000508167 CCL15Q16663 113 aa12.68□□□□□ -0.38
PROM1-207ENST00000508167 STAG2Q8N3U4 1231 aa12.68□□□□□ -0.38
PROM1-207ENST00000508167 RPAP3Q9H6T3 665 aaPredicted RBP12.68□□□□□ -0.38
PROM1-207ENST00000508167 RTN4Q9NQC3 1192 aaKnown RBP12.68□□□□□ -0.38
PROM1-207ENST00000508167 SPDYE5A6NIY4 337 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 STAT2P52630 851 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 PPP2R5BQ15173 497 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 NTRK3Q16288 839 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 LEO1Q8WVC0 666 aaPredicted RBP12.67□□□□□ -0.38
PROM1-207ENST00000508167 SHISA4Q96DD7 197 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 RRP36Q96EU6 259 aaKnown RBP12.67□□□□□ -0.38
PROM1-207ENST00000508167 FTOQ9C0B1 505 aaKnown RBP eCLIP12.67□□□□□ -0.38
PROM1-207ENST00000508167 VPS37CA5D8V6 355 aaPredicted RBP12.67□□□□□ -0.38
PROM1-207ENST00000508167 TROAPQ12815 778 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 PABPC4Q13310 644 aaKnown RBP eCLIP12.67□□□□□ -0.38
PROM1-207ENST00000508167 TTBK2Q6IQ55 1244 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 FASTKD5Q7L8L6 764 aaKnown RBP12.67□□□□□ -0.38
PROM1-207ENST00000508167 DCAF4Q8WV16 495 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 LPAR1Q92633 364 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 KIAA1683Q9H0B3 1180 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 PLEKHA8P1O95397 391 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 FERMT3Q86UX7 667 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 PAGR1Q9BTK6 254 aa12.67□□□□□ -0.38
PROM1-207ENST00000508167 PPIL2Q13356 520 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 NOL9Q5SY16 702 aaKnown RBP12.66□□□□□ -0.38
PROM1-207ENST00000508167 CCDC174Q6PII3 467 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 HEATR3Q7Z4Q2 680 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 WDR18Q9BV38 432 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 FIBPO43427 364 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 CDC27P30260 824 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 GTF2A2P52657 109 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 SNAP25P60880 206 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 DEFB115Q30KQ5 88 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 CCDC102AQ96A19 550 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 LZTS2Q9BRK4 669 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 IGKV6D-41A0A0C4DH26 115 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 CXCL11O14625 94 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 CETPP11597 493 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 HMGN5P82970 282 aaKnown RBP12.66□□□□□ -0.38
PROM1-207ENST00000508167 GUCY1B3Q02153 619 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 ZNF543Q08ER8 600 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 GRM4Q14833 912 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 CCDC183Q5T5S1 534 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 LDLRAD1Q5T700 205 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 SAPCD2Q86UD0 394 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 WASF1Q92558 559 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 MKL1Q969V6 931 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 WNK4Q96J92 1243 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 WDR46O15213 610 aaKnown RBP12.66□□□□□ -0.38
PROM1-207ENST00000508167 VCAM1P19320 739 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 ANKS1AQ92625 1134 aa12.66□□□□□ -0.38
PROM1-207ENST00000508167 SNW1Q13573 536 aaKnown RBP12.65□□□□□ -0.38
PROM1-207ENST00000508167 OTUD7BQ6GQQ9 843 aa12.65□□□□□ -0.38
PROM1-207ENST00000508167 CYP4F22Q6NT55 531 aa12.65□□□□□ -0.38
PROM1-207ENST00000508167 FBXO28Q9NVF7 368 aa12.65□□□□□ -0.38
PROM1-207ENST00000508167 AFG3L2Q9Y4W6 797 aa12.65□□□□□ -0.38
PROM1-207ENST00000508167 ZBED4O75132 1171 aa12.65□□□□□ -0.38
PROM1-207ENST00000508167 OSBPP22059 807 aa12.65□□□□□ -0.38
PROM1-207ENST00000508167 CCDC173Q0VFZ6 552 aa12.65□□□□□ -0.38
PROM1-207ENST00000508167 MAP3K11Q16584 847 aa12.65□□□□□ -0.38
PROM1-207ENST00000508167 USH1GQ495M9 461 aa12.65□□□□□ -0.38
PROM1-207ENST00000508167 SYDE2Q5VT97 1194 aa12.65□□□□□ -0.38
PROM1-207ENST00000508167 SIAH1Q8IUQ4 282 aa12.65□□□□□ -0.38
PROM1-207ENST00000508167 PLIN4Q96Q06 1357 aa12.65□□□□□ -0.38
PROM1-207ENST00000508167 KIF28PB7ZC32 967 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 USP17L15C9J2P7 530 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 USP17L13C9JLJ4 530 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 USP17L11C9JVI0 530 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 USP17L18D6R9N7 530 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 USP17L22D6RA61 530 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 USP17L17D6RBQ6 530 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 USP17L19D6RCP7 530 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 USP17L20D6RJB6 530 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 PDIA4P13667 645 aaKnown RBP12.65□□□□□ -0.39
PROM1-207ENST00000508167 APLP1P51693 650 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 USP17L24Q0WX57 530 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 SAFBQ15424 915 aaKnown RBP eCLIP12.65□□□□□ -0.39
PROM1-207ENST00000508167 GMCL1P1Q8NEA9 526 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms