RNA–Protein interactions for RNA: ENST00000508086.1

CCSER1-206, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-206ENST00000508086 USP48Q86UV5 1035 aa7.51□□□□□ -1.21
CCSER1-206ENST00000508086 NKD1Q969G9 470 aa7.51□□□□□ -1.21
CCSER1-206ENST00000508086 ATG4CQ96DT6 458 aa7.51□□□□□ -1.21
CCSER1-206ENST00000508086 SIRT5Q9NXA8 310 aa7.51□□□□□ -1.21
CCSER1-206ENST00000508086 SHISA3A0PJX4 238 aa7.5□□□□□ -1.21
CCSER1-206ENST00000508086 POLR2BP30876 1174 aaKnown RBP7.5□□□□□ -1.21
CCSER1-206ENST00000508086 AFF3P51826 1226 aaKnown RBP7.5□□□□□ -1.21
CCSER1-206ENST00000508086 ZNF394Q53GI3 561 aa7.5□□□□□ -1.21
CCSER1-206ENST00000508086 FEZF2Q8TBJ5 459 aa7.5□□□□□ -1.21
CCSER1-206ENST00000508086 SIGLEC10Q96LC7 697 aa7.5□□□□□ -1.21
CCSER1-206ENST00000508086 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.5□□□□□ -1.21
CCSER1-206ENST00000508086 XYLT2Q9H1B5 865 aa7.5□□□□□ -1.21
CCSER1-206ENST00000508086 GCM1Q9NP62 436 aa7.5□□□□□ -1.21
CCSER1-206ENST00000508086 OR14I1A6ND48 311 aa7.49□□□□□ -1.21
CCSER1-206ENST00000508086 MCM4P33991 863 aa7.49□□□□□ -1.21
CCSER1-206ENST00000508086 SRSF3P84103 164 aaKnown RBP7.49□□□□□ -1.21
CCSER1-206ENST00000508086 CHRNEQ04844 493 aa7.49□□□□□ -1.21
CCSER1-206ENST00000508086 DUSP4Q13115 394 aa7.49□□□□□ -1.21
CCSER1-206ENST00000508086 SNX17Q15036 470 aa7.49□□□□□ -1.21
CCSER1-206ENST00000508086 NLRC3Q7RTR2 1065 aa7.49□□□□□ -1.21
CCSER1-206ENST00000508086 SIRT2Q8IXJ6 389 aa7.49□□□□□ -1.21
CCSER1-206ENST00000508086 PANK1Q8TE04 598 aa7.49□□□□□ -1.21
CCSER1-206ENST00000508086 ANTXR1Q9H6X2 564 aa7.49□□□□□ -1.21
CCSER1-206ENST00000508086 PCDHGB7Q9Y5F8 929 aa7.49□□□□□ -1.21
CCSER1-206ENST00000508086 NME1P15531 152 aaKnown RBP7.48□□□□□ -1.21
CCSER1-206ENST00000508086 CCNFP41002 786 aa7.48□□□□□ -1.21
CCSER1-206ENST00000508086 RNF4P78317 190 aa7.48□□□□□ -1.21
CCSER1-206ENST00000508086 LRRFIP1Q32MZ4 808 aaKnown RBP7.48□□□□□ -1.21
CCSER1-206ENST00000508086 ADGRF1Q5T601 910 aa7.48□□□□□ -1.21
CCSER1-206ENST00000508086 NBPF12Q5TAG4 269 aaPredicted RBP7.48□□□□□ -1.21
CCSER1-206ENST00000508086 RNF34Q969K3 372 aa7.48□□□□□ -1.21
CCSER1-206ENST00000508086 SP110Q9HB58 689 aa7.48□□□□□ -1.21
CCSER1-206ENST00000508086 PCDHA11Q9Y5I1 949 aa7.48□□□□□ -1.21
CCSER1-206ENST00000508086 SHROOM4Q9ULL8 1493 aa7.48□□□□□ -1.21
CCSER1-206ENST00000508086 TNFRSF10CO14798 259 aa7.47□□□□□ -1.21
CCSER1-206ENST00000508086 GALK1P51570 392 aa7.47□□□□□ -1.21
CCSER1-206ENST00000508086 RACK1P63244 317 aaKnown RBP7.47□□□□□ -1.21
CCSER1-206ENST00000508086 NR0B2Q15466 257 aa7.47□□□□□ -1.21
CCSER1-206ENST00000508086 VMACQ2NL98 169 aa7.47□□□□□ -1.21
CCSER1-206ENST00000508086 ZXDCQ2QGD7 858 aaPredicted RBP7.47□□□□□ -1.21
CCSER1-206ENST00000508086 IGSF5Q9NSI5 407 aa7.47□□□□□ -1.21
CCSER1-206ENST00000508086 DDX41Q9UJV9 622 aaKnown RBP7.47□□□□□ -1.21
CCSER1-206ENST00000508086 ZNRF3Q9ULT6 936 aa7.47□□□□□ -1.21
CCSER1-206ENST00000508086 SCAMP3O14828 347 aaKnown RBP7.46□□□□□ -1.22
CCSER1-206ENST00000508086 RAD51AP2Q09MP3 1159 aa7.46□□□□□ -1.22
CCSER1-206ENST00000508086 NBPF9Q3BBW0 867 aa7.46□□□□□ -1.22
CCSER1-206ENST00000508086 ENOX1Q8TC92 643 aaKnown RBP7.46□□□□□ -1.22
CCSER1-206ENST00000508086 HDAC8Q9BY41 377 aa7.46□□□□□ -1.22
CCSER1-206ENST00000508086 PSPNO60542 156 aa7.45□□□□□ -1.22
CCSER1-206ENST00000508086 CHMP4BP1P59074 171 aa7.45□□□□□ -1.22
CCSER1-206ENST00000508086 NFKB2Q00653 900 aa7.45□□□□□ -1.22
CCSER1-206ENST00000508086 TEKQ02763 1124 aa7.45□□□□□ -1.22
CCSER1-206ENST00000508086 PLP2Q04941 152 aa7.45□□□□□ -1.22
CCSER1-206ENST00000508086 NMIQ13287 307 aaPredicted RBP7.45□□□□□ -1.22
CCSER1-206ENST00000508086 METTL16Q86W50 562 aaKnown RBP7.45□□□□□ -1.22
CCSER1-206ENST00000508086 SP8Q8IXZ3 490 aa7.45□□□□□ -1.22
CCSER1-206ENST00000508086 TMEM192Q8IY95 271 aa7.45□□□□□ -1.22
CCSER1-206ENST00000508086 ANKS4BQ8N8V4 417 aa7.45□□□□□ -1.22
CCSER1-206ENST00000508086 SYTL5Q8TDW5 730 aaPredicted RBP7.45□□□□□ -1.22
CCSER1-206ENST00000508086 ZNF281Q9Y2X9 895 aa7.45□□□□□ -1.22
CCSER1-206ENST00000508086 CLEC3AO75596 197 aa7.44□□□□□ -1.22
CCSER1-206ENST00000508086 SNW1Q13573 536 aaKnown RBP7.44□□□□□ -1.22
CCSER1-206ENST00000508086 CLEC16AQ2KHT3 1053 aa7.44□□□□□ -1.22
CCSER1-206ENST00000508086 DAGLBQ8NCG7 672 aa7.44□□□□□ -1.22
CCSER1-206ENST00000508086 SLC9A7Q96T83 725 aa7.44□□□□□ -1.22
CCSER1-206ENST00000508086 ACRP10323 421 aa7.43□□□□□ -1.22
CCSER1-206ENST00000508086 IMPDH2P12268 514 aa7.43□□□□□ -1.22
CCSER1-206ENST00000508086 SLC14A2Q15849 920 aa7.43□□□□□ -1.22
CCSER1-206ENST00000508086 SPATS1Q496A3 300 aa7.43□□□□□ -1.22
CCSER1-206ENST00000508086 TMC3Q7Z5M5 1100 aa7.43□□□□□ -1.22
CCSER1-206ENST00000508086 ZNF512BQ96KM6 892 aaPredicted RBP7.43□□□□□ -1.22
CCSER1-206ENST00000508086 ASCC2Q9H1I8 757 aaPredicted RBP7.43□□□□□ -1.22
CCSER1-206ENST00000508086 INSRRP14616 1297 aa7.42□□□□□ -1.22
CCSER1-206ENST00000508086 PUM1Q14671 1186 aaKnown RBP eCLIP7.42□□□□□ -1.22
CCSER1-206ENST00000508086 INTS3Q68E01 1043 aaKnown RBP7.42□□□□□ -1.22
CCSER1-206ENST00000508086 TAB3Q8N5C8 712 aaPredicted RBP7.42□□□□□ -1.22
CCSER1-206ENST00000508086 USHBP1Q8N6Y0 703 aa7.42□□□□□ -1.22
CCSER1-206ENST00000508086 DACT3Q96B18 629 aaPredicted RBP7.42□□□□□ -1.22
CCSER1-206ENST00000508086 MRRFQ96E11 262 aaKnown RBP7.42□□□□□ -1.22
CCSER1-206ENST00000508086 TCTN2Q96GX1 697 aa7.42□□□□□ -1.22
CCSER1-206ENST00000508086 SLC6A18Q96N87 628 aa7.42□□□□□ -1.22
CCSER1-206ENST00000508086 ADAM7Q9H2U9 754 aa7.42□□□□□ -1.22
CCSER1-206ENST00000508086 KIAA1522Q9P206 1035 aaPredicted RBP7.42□□□□□ -1.22
CCSER1-206ENST00000508086 EBF1Q9UH73 591 aa7.42□□□□□ -1.22
CCSER1-206ENST00000508086 MBD1Q9UIS9 605 aaPredicted RBP7.42□□□□□ -1.22
CCSER1-206ENST00000508086 UNCXA6NJT0 531 aa7.41□□□□□ -1.22
CCSER1-206ENST00000508086 KRTAP10-2P60368 255 aa7.41□□□□□ -1.22
CCSER1-206ENST00000508086 OLFML2BQ68BL8 750 aa7.41□□□□□ -1.22
CCSER1-206ENST00000508086 CNKSR3Q6P9H4 555 aa7.41□□□□□ -1.22
CCSER1-206ENST00000508086 RNF111Q6ZNA4 994 aa7.41□□□□□ -1.22
CCSER1-206ENST00000508086 ZNF654Q8IZM8 581 aa7.41□□□□□ -1.22
CCSER1-206ENST00000508086 ZNF655Q8N720 491 aaPredicted RBP7.41□□□□□ -1.22
CCSER1-206ENST00000508086 SYT8Q8NBV8 401 aa7.41□□□□□ -1.22
CCSER1-206ENST00000508086 RBBP8NLQ8NC74 664 aaPredicted RBP7.41□□□□□ -1.22
CCSER1-206ENST00000508086 GPR20Q99678 358 aa7.41□□□□□ -1.22
CCSER1-206ENST00000508086 G6PC3Q9BUM1 346 aa7.41□□□□□ -1.22
CCSER1-206ENST00000508086 PRDM14Q9GZV8 571 aa7.41□□□□□ -1.22
CCSER1-206ENST00000508086 ZMYM5Q9UJ78 669 aa7.41□□□□□ -1.22
CCSER1-206ENST00000508086 SIGLEC6O43699 453 aa7.4□□□□□ -1.22
CCSER1-206ENST00000508086 PRAMEF1O95521 474 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms