RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 SUCLG2Q96I99 432 aa8.45□□□□□ -1.06
CLCN3-206ENST00000507875 ESYT1Q9BSJ8 1104 aa8.45□□□□□ -1.06
CLCN3-206ENST00000507875 R3HCC1Q9Y3T6 440 aaKnown RBP8.45□□□□□ -1.06
CLCN3-206ENST00000507875 KCNMB2Q9Y691 235 aa8.45□□□□□ -1.06
CLCN3-206ENST00000507875 TTC36A6NLP5 189 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 IRS4O14654 1257 aaPredicted RBP8.44□□□□□ -1.06
CLCN3-206ENST00000507875 SEZ6Q53EL9 994 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 FBXW10Q5XX13 1052 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 LARP1BQ659C4 914 aaKnown RBP8.44□□□□□ -1.06
CLCN3-206ENST00000507875 TPTE2Q6XPS3 522 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 CMTR1Q8N1G2 835 aaKnown RBP8.44□□□□□ -1.06
CLCN3-206ENST00000507875 SDR16C5Q8N3Y7 309 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 PHC3Q8NDX5 983 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 SNX29Q8TEQ0 813 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 KIF1BPQ96EK5 621 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 LRRCC1Q9C099 1032 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 NYXQ9GZU5 481 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 ELP3Q9H9T3 547 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 MAP4K5Q9Y4K4 846 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 PTCH2Q9Y6C5 1203 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 SRGAP3O43295 1099 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 VIL1P09327 827 aaKnown RBP8.44□□□□□ -1.06
CLCN3-206ENST00000507875 PIP4K2AP48426 406 aaPredicted RBP8.44□□□□□ -1.06
CLCN3-206ENST00000507875 TRIM32Q13049 653 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 ANKRD45Q5TZF3 282 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 NBPF11Q86T75 865 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 MPHOSPH6Q99547 160 aaKnown RBP8.44□□□□□ -1.06
CLCN3-206ENST00000507875 MAF1Q9H063 256 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 KANSL3Q9P2N6 904 aa8.44□□□□□ -1.06
CLCN3-206ENST00000507875 ARAP2Q8WZ64 1704 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 NRXN2Q9P2S2 1712 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 FAM205CA6NFA0 338 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 GOLGA8CPA6NN73 597 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 GREM1O60565 184 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 CYP2E1P05181 493 aaPredicted RBP8.43□□□□□ -1.06
CLCN3-206ENST00000507875 CSF1RP07333 972 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 CNGA1P29973 690 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 GNALP38405 381 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 IDH3AP50213 366 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 CENPCQ03188 943 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 TRAPPC3LQ5T215 181 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 PEAR1Q5VY43 1037 aaPredicted RBP8.43□□□□□ -1.06
CLCN3-206ENST00000507875 ZNF280DQ6N043 979 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 RELL1Q8IUW5 271 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 KAZALD1Q96I82 304 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 SYT17Q9BSW7 474 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 BICC1Q9H694 974 aaKnown RBP8.43□□□□□ -1.06
CLCN3-206ENST00000507875 PNMA6EA0A0J9YXQ4 647 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 PDE8AO60658 829 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 CIAO1O76071 339 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 FOXO4P98177 505 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 SYCP2LQ5T4T6 812 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 UBE3BQ7Z3V4 1068 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 DDX42Q86XP3 938 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLCN3-206ENST00000507875 UTP14AQ9BVJ6 771 aaKnown RBP8.43□□□□□ -1.06
CLCN3-206ENST00000507875 NT5C1AQ9BXI3 368 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 SPEF2Q9C093 1822 aa8.43□□□□□ -1.06
CLCN3-206ENST00000507875 BDNFP23560 247 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 G3BP1Q13283 466 aaKnown RBP eCLIP8.42□□□□□ -1.06
CLCN3-206ENST00000507875 HLFQ16534 295 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 AXDND1Q5T1B0 1012 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-206ENST00000507875 C11orf96Q7Z7L8 435 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 COL23A1Q86Y22 540 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-206ENST00000507875 AGBL1Q96MI9 1066 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 GPR108Q9NPR9 543 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 AKAP2Q9Y2D5 859 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 SH3TC1Q8TE82 1336 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 USP42Q9H9J4 1324 aaKnown RBP8.42□□□□□ -1.06
CLCN3-206ENST00000507875 A0A1B0GUL6 1792 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 GOLGA6CA6NDK9 693 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 GOLGA6BA6NDN3 693 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 TRPA1O75762 1119 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 GOLGA6DP0CG33 693 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 MTERF2Q49AM1 385 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 ARSHQ5FYA8 562 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 SLC10A5Q5PT55 438 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 BNC2Q6ZN30 1099 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-206ENST00000507875 RUFY4Q6ZNE9 571 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 SLC39A13Q96H72 371 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 SCUBE2Q9NQ36 999 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 GOLGA6AQ9NYA3 693 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 STAP2Q9UGK3 403 aa8.42□□□□□ -1.06
CLCN3-206ENST00000507875 PAGE1O75459 146 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 SURF6O75683 361 aaKnown RBP8.41□□□□□ -1.06
CLCN3-206ENST00000507875 GJB6O95452 261 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 RFX5P48382 616 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-206ENST00000507875 BMP2KLQ5H9B9 411 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 UPF2Q9HAU5 1272 aaKnown RBP8.41□□□□□ -1.06
CLCN3-206ENST00000507875 ANKIB1Q9P2G1 1089 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 TRMT112Q9UI30 125 aaKnown RBP8.41□□□□□ -1.06
CLCN3-206ENST00000507875 ACPPP15309 386 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 RFC4P35249 363 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 PBX2P40425 430 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 CAMK2GQ13555 558 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-206ENST00000507875 C2orf27AQ580R0 203 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 MRM1Q6IN84 353 aaKnown RBP8.41□□□□□ -1.06
CLCN3-206ENST00000507875 TTC41PQ6P2S7 1318 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 C14orf80Q86SX3 495 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 CCDC116Q8IYX3 515 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 ZNF687Q8N1G0 1237 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms