RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 CCDC194A0A1B0GVG4 234 aa20.09■□□□□ 0.81
SFXN1-208ENST00000507823 VWA3AA6NCI4 1184 aa20.09■□□□□ 0.81
SFXN1-208ENST00000507823 SMC2O95347 1197 aa20.09■□□□□ 0.81
SFXN1-208ENST00000507823 MCM7P33993 719 aa20.09■□□□□ 0.81
SFXN1-208ENST00000507823 NFIAQ12857 509 aa20.09■□□□□ 0.81
SFXN1-208ENST00000507823 ISM2Q6H9L7 571 aa20.09■□□□□ 0.81
SFXN1-208ENST00000507823 PDILTQ8N807 584 aa20.09■□□□□ 0.81
SFXN1-208ENST00000507823 PRPHP41219 470 aa20.09■□□□□ 0.81
SFXN1-208ENST00000507823 DPYDQ12882 1025 aa20.09■□□□□ 0.81
SFXN1-208ENST00000507823 KRT25Q7Z3Z0 450 aa20.09■□□□□ 0.81
SFXN1-208ENST00000507823 LRRC8AQ8IWT6 810 aa20.09■□□□□ 0.81
SFXN1-208ENST00000507823 DHX58Q96C10 678 aa20.09■□□□□ 0.81
SFXN1-208ENST00000507823 COL2A1P02458 1487 aaPredicted RBP20.09■□□□□ 0.81
SFXN1-208ENST00000507823 GNA11P29992 359 aa20.08■□□□□ 0.81
SFXN1-208ENST00000507823 CHRNA5P30532 468 aa20.08■□□□□ 0.81
SFXN1-208ENST00000507823 ORC2Q13416 577 aaPredicted RBP20.08■□□□□ 0.81
SFXN1-208ENST00000507823 GRIPAP1Q4V328 841 aa20.08■□□□□ 0.81
SFXN1-208ENST00000507823 ENOX1Q8TC92 643 aaKnown RBP20.08■□□□□ 0.81
SFXN1-208ENST00000507823 RASGRP4Q8TDF6 673 aa20.08■□□□□ 0.81
SFXN1-208ENST00000507823 XPO4Q9C0E2 1151 aaKnown RBP20.08■□□□□ 0.81
SFXN1-208ENST00000507823 GSDMDP57764 484 aa20.08■□□□□ 0.8
SFXN1-208ENST00000507823 FANCCQ00597 558 aa20.08■□□□□ 0.8
SFXN1-208ENST00000507823 LRMPQ12912 555 aa20.08■□□□□ 0.8
SFXN1-208ENST00000507823 PDXDC2PQ6P474 469 aa20.08■□□□□ 0.8
SFXN1-208ENST00000507823 GRAMD1CQ8IYS0 662 aa20.08■□□□□ 0.8
SFXN1-208ENST00000507823 SUPT20HQ8NEM7 779 aa20.08■□□□□ 0.8
SFXN1-208ENST00000507823 GSDMAQ96QA5 445 aa20.08■□□□□ 0.8
SFXN1-208ENST00000507823 C6orf50Q9HD87 102 aa20.08■□□□□ 0.8
SFXN1-208ENST00000507823 MYH4Q9Y623 1939 aa20.08■□□□□ 0.8
SFXN1-208ENST00000507823 DHX8Q14562 1220 aaKnown RBP20.07■□□□□ 0.8
SFXN1-208ENST00000507823 POTEAQ6S8J7 498 aa20.07■□□□□ 0.8
SFXN1-208ENST00000507823 IQUBQ8NA54 791 aa20.07■□□□□ 0.8
SFXN1-208ENST00000507823 NAP1L5Q96NT1 182 aaPredicted RBP20.07■□□□□ 0.8
SFXN1-208ENST00000507823 DNAJC18Q9H819 358 aa20.07■□□□□ 0.8
SFXN1-208ENST00000507823 IFNKQ9P0W0 207 aa20.07■□□□□ 0.8
SFXN1-208ENST00000507823 SEC63Q9UGP8 760 aaKnown RBP20.07■□□□□ 0.8
SFXN1-208ENST00000507823 ERCC5P28715 1186 aaPredicted RBP20.07■□□□□ 0.8
SFXN1-208ENST00000507823 NAPAP54920 295 aa20.07■□□□□ 0.8
SFXN1-208ENST00000507823 ZNF543Q08ER8 600 aa20.07■□□□□ 0.8
SFXN1-208ENST00000507823 PIGSQ96S52 555 aa20.07■□□□□ 0.8
SFXN1-208ENST00000507823 CPVLQ9H3G5 476 aa20.07■□□□□ 0.8
SFXN1-208ENST00000507823 FAM198AQ9UFP1 575 aa20.07■□□□□ 0.8
SFXN1-208ENST00000507823 C17orf53Q8N3J3 647 aaPredicted RBP20.06■□□□□ 0.8
SFXN1-208ENST00000507823 ZNF18P17022 549 aa20.06■□□□□ 0.8
SFXN1-208ENST00000507823 LMOD1P29536 600 aaPredicted RBP20.06■□□□□ 0.8
SFXN1-208ENST00000507823 EN1Q05925 392 aaPredicted RBP20.06■□□□□ 0.8
SFXN1-208ENST00000507823 MTMR7Q9Y216 660 aa20.06■□□□□ 0.8
SFXN1-208ENST00000507823 ATRNL1Q5VV63 1379 aa20.06■□□□□ 0.8
SFXN1-208ENST00000507823 SMCO2A6NFE2 343 aa20.06■□□□□ 0.8
SFXN1-208ENST00000507823 INF2Q27J81 1249 aa20.06■□□□□ 0.8
SFXN1-208ENST00000507823 PPP1R18Q6NYC8 613 aa20.06■□□□□ 0.8
SFXN1-208ENST00000507823 KIAA0825Q8IV33 1275 aa20.06■□□□□ 0.8
SFXN1-208ENST00000507823 ZFPM1Q8IX07 1006 aa20.06■□□□□ 0.8
SFXN1-208ENST00000507823 FBXO41Q8TF61 875 aa20.06■□□□□ 0.8
SFXN1-208ENST00000507823 MKL1Q969V6 931 aa20.06■□□□□ 0.8
SFXN1-208ENST00000507823 MTMR8Q96EF0 704 aa20.06■□□□□ 0.8
SFXN1-208ENST00000507823 ATP1A3P13637 1013 aa20.05■□□□□ 0.8
SFXN1-208ENST00000507823 LRRC47Q8N1G4 583 aaKnown RBP20.05■□□□□ 0.8
SFXN1-208ENST00000507823 KCND1Q9NSA2 647 aa20.05■□□□□ 0.8
SFXN1-208ENST00000507823 CBFA2T2O43439 604 aa20.05■□□□□ 0.8
SFXN1-208ENST00000507823 NONOQ15233 471 aaKnown RBP eCLIP20.05■□□□□ 0.8
SFXN1-208ENST00000507823 GPATCH4Q5T3I0 446 aaKnown RBP20.05■□□□□ 0.8
SFXN1-208ENST00000507823 TATDN1Q6P1N9 297 aa20.05■□□□□ 0.8
SFXN1-208ENST00000507823 MED15Q96RN5 788 aa20.05■□□□□ 0.8
SFXN1-208ENST00000507823 CCSER1Q9C0I3 900 aa20.05■□□□□ 0.8
SFXN1-208ENST00000507823 TMEM60Q9H2L4 133 aa20.05■□□□□ 0.8
SFXN1-208ENST00000507823 PI4KBQ9UBF8 816 aa20.05■□□□□ 0.8
SFXN1-208ENST00000507823 TPM2P07951 284 aa20.04■□□□□ 0.8
SFXN1-208ENST00000507823 FMR1Q06787 632 aaKnown RBP eCLIP20.04■□□□□ 0.8
SFXN1-208ENST00000507823 AOC3Q16853 763 aa20.04■□□□□ 0.8
SFXN1-208ENST00000507823 SH3BP5LQ7L8J4 393 aa20.04■□□□□ 0.8
SFXN1-208ENST00000507823 UBA5Q9GZZ9 404 aa20.04■□□□□ 0.8
SFXN1-208ENST00000507823 FANCLQ9NW38 375 aa20.04■□□□□ 0.8
SFXN1-208ENST00000507823 CCZ1BP86790 482 aa20.04■□□□□ 0.8
SFXN1-208ENST00000507823 CCZ1P86791 482 aaPredicted RBP20.04■□□□□ 0.8
SFXN1-208ENST00000507823 DTHD1Q6ZMT9 781 aa20.04■□□□□ 0.8
SFXN1-208ENST00000507823 PCDHAC2Q9Y5I4 1007 aa20.04■□□□□ 0.8
SFXN1-208ENST00000507823 GTPBP6O43824 516 aaPredicted RBP20.03■□□□□ 0.8
SFXN1-208ENST00000507823 CUL4BQ13620 913 aa20.03■□□□□ 0.8
SFXN1-208ENST00000507823 SOGA3Q5TF21 947 aa20.03■□□□□ 0.8
SFXN1-208ENST00000507823 MTRQ99707 1265 aa20.03■□□□□ 0.8
SFXN1-208ENST00000507823 NYAP2Q9P242 653 aa20.03■□□□□ 0.8
SFXN1-208ENST00000507823 DDTLA6NHG4 134 aaPredicted RBP20.03■□□□□ 0.8
SFXN1-208ENST00000507823 HOMER1Q86YM7 354 aa20.03■□□□□ 0.8
SFXN1-208ENST00000507823 R3HCC1Q9Y3T6 440 aaKnown RBP20.03■□□□□ 0.8
SFXN1-208ENST00000507823 KIF13BQ9NQT8 1826 aa20.02■□□□□ 0.8
SFXN1-208ENST00000507823 FRMPD2Q68DX3 1309 aaPredicted RBP20.02■□□□□ 0.8
SFXN1-208ENST00000507823 PNMA6FA0A0J9YX94 578 aa20.02■□□□□ 0.8
SFXN1-208ENST00000507823 ENTPD3O75355 529 aa20.02■□□□□ 0.8
SFXN1-208ENST00000507823 CLEC10AQ8IUN9 316 aa20.02■□□□□ 0.8
SFXN1-208ENST00000507823 CCDC150Q8NCX0 1101 aa20.02■□□□□ 0.8
SFXN1-208ENST00000507823 AK8Q96MA6 479 aa20.02■□□□□ 0.8
SFXN1-208ENST00000507823 JMJD4Q9H9V9 463 aa20.02■□□□□ 0.8
SFXN1-208ENST00000507823 YDJCA8MPS7 323 aa20.02■□□□□ 0.79
SFXN1-208ENST00000507823 TXLNAP40222 546 aa20.02■□□□□ 0.79
SFXN1-208ENST00000507823 AFMP43652 599 aa20.02■□□□□ 0.79
SFXN1-208ENST00000507823 SEMA3FQ13275 785 aa20.02■□□□□ 0.79
SFXN1-208ENST00000507823 ARID5BQ14865 1188 aa20.02■□□□□ 0.79
SFXN1-208ENST00000507823 NEK8Q86SG6 692 aa20.02■□□□□ 0.79
SFXN1-208ENST00000507823 FILIP1Q7Z7B0 1213 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms