RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 USP17L20D6RJB6 530 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 PDHXO00330 501 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 FLOT1O75955 427 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 KIF5BP33176 963 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 STAT2P52630 851 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 USP17L24Q0WX57 530 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 NTRK3Q16288 839 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 POTEEQ6S8J3 1075 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 TMTC3Q6ZXV5 915 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 GTF3C6Q969F1 213 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 PKNOX2Q96KN3 472 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 ASCC2Q9H1I8 757 aaPredicted RBP12.41□□□□□ -0.42
TRIM6-209ENST00000507320 SMCHD1A6NHR9 2005 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 COL11A1P12107 1806 aaPredicted RBP12.41□□□□□ -0.42
TRIM6-209ENST00000507320 PEX10O60683 326 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 CYP2C8P10632 490 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 TM4SF4P48230 202 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 MCM2P49736 904 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 FUT2Q10981 343 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 IKQ13123 557 aaPredicted RBP12.41□□□□□ -0.42
TRIM6-209ENST00000507320 BTNL9Q6UXG8 535 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 ANKRD23Q86SG2 305 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 IFNL1Q8IU54 200 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 CCDC83Q8IWF9 413 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 RBM28Q9NW13 759 aaKnown RBP12.41□□□□□ -0.42
TRIM6-209ENST00000507320 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 SPDYE16A6NNV3 312 aaPredicted RBP12.4□□□□□ -0.42
TRIM6-209ENST00000507320 K7ELQ4 463 aaPredicted RBP12.4□□□□□ -0.42
TRIM6-209ENST00000507320 CTDNEP1O95476 244 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 INHBEP58166 350 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 SNAP25P60880 206 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 SREBF2Q12772 1141 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 COG2Q14746 738 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 ADGRF4Q8IZF3 695 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 ATG4CQ96DT6 458 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 ZSCAN31Q96LW9 406 aaPredicted RBP12.4□□□□□ -0.42
TRIM6-209ENST00000507320 P2RX7Q99572 595 aaKnown RBP12.4□□□□□ -0.42
TRIM6-209ENST00000507320 SLF1Q9BQI6 1058 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 VAT1LQ9HCJ6 419 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 SH2B1Q9NRF2 756 aaPredicted RBP12.4□□□□□ -0.42
TRIM6-209ENST00000507320 FEM1BQ9UK73 627 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 PPP1R9AQ9ULJ8 1098 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 PRR12Q9ULL5 1215 aa12.4□□□□□ -0.42
TRIM6-209ENST00000507320 RBM19Q9Y4C8 960 aaKnown RBP12.4□□□□□ -0.42
TRIM6-209ENST00000507320 MYH6P13533 1939 aa12.39□□□□□ -0.43
TRIM6-209ENST00000507320 CNTNAP5Q8WYK1 1306 aa12.39□□□□□ -0.43
TRIM6-209ENST00000507320 hCG_1642624A0A1W2PR95 340 aa12.39□□□□□ -0.43
TRIM6-209ENST00000507320 PLA2G6O60733 806 aa12.39□□□□□ -0.43
TRIM6-209ENST00000507320 DSG3P32926 999 aa12.39□□□□□ -0.43
TRIM6-209ENST00000507320 IRX3P78415 501 aaPredicted RBP12.39□□□□□ -0.43
TRIM6-209ENST00000507320 PPP2R5BQ15173 497 aa12.39□□□□□ -0.43
TRIM6-209ENST00000507320 SYDE2Q5VT97 1194 aa12.39□□□□□ -0.43
TRIM6-209ENST00000507320 PRPF38AQ8NAV1 312 aaKnown RBP12.39□□□□□ -0.43
TRIM6-209ENST00000507320 CHURC1Q8WUH1 139 aa12.39□□□□□ -0.43
TRIM6-209ENST00000507320 PIBF1Q8WXW3 757 aa12.39□□□□□ -0.43
TRIM6-209ENST00000507320 PHKBQ93100 1093 aa12.39□□□□□ -0.43
TRIM6-209ENST00000507320 RIOX1Q9H6W3 641 aa12.39□□□□□ -0.43
TRIM6-209ENST00000507320 JMJD4Q9H9V9 463 aa12.39□□□□□ -0.43
TRIM6-209ENST00000507320 CCDC196A0A1B0GTZ2 297 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 MAP2K2P36507 400 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 HERVK_113P62684 666 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 PABPC4Q13310 644 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRIM6-209ENST00000507320 FAM160B2Q86V87 743 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 HSCBQ8IWL3 235 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 DNAJC5GQ8N7S2 189 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 SPZ1Q9BXG8 430 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 ADAMTS5Q9UNA0 930 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 SLC45A1Q9Y2W3 748 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 A0A0G2JMZ2 1700 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 VWA5AO00534 786 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 CPLX1O14810 134 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
TRIM6-209ENST00000507320 JAK2O60674 1132 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 IFNAR1P17181 557 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 TAL1P17542 331 aaPredicted RBP12.38□□□□□ -0.43
TRIM6-209ENST00000507320 GNAQP50148 359 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 HOMER1Q86YM7 354 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 NSUN7Q8NE18 718 aaKnown RBP12.38□□□□□ -0.43
TRIM6-209ENST00000507320 PIGSQ96S52 555 aa12.38□□□□□ -0.43
TRIM6-209ENST00000507320 OSBPP22059 807 aa12.37□□□□□ -0.43
TRIM6-209ENST00000507320 TAF1CQ15572 869 aaPredicted RBP12.37□□□□□ -0.43
TRIM6-209ENST00000507320 REPS2Q8NFH8 660 aa12.37□□□□□ -0.43
TRIM6-209ENST00000507320 MTMR8Q96EF0 704 aa12.37□□□□□ -0.43
TRIM6-209ENST00000507320 LZTS2Q9BRK4 669 aa12.37□□□□□ -0.43
TRIM6-209ENST00000507320 RANBP17Q9H2T7 1088 aaKnown RBP12.37□□□□□ -0.43
TRIM6-209ENST00000507320 SLC38A10Q9HBR0 1119 aa12.37□□□□□ -0.43
TRIM6-209ENST00000507320 TXNRD2Q9NNW7 524 aa12.37□□□□□ -0.43
TRIM6-209ENST00000507320 HOXC10Q9NYD6 342 aa12.37□□□□□ -0.43
TRIM6-209ENST00000507320 PNMA3Q9UL41 463 aa12.37□□□□□ -0.43
TRIM6-209ENST00000507320 V9GY48 417 aaPredicted RBP12.37□□□□□ -0.43
TRIM6-209ENST00000507320 ZNF536O15090 1300 aa12.37□□□□□ -0.43
TRIM6-209ENST00000507320 MYPNQ86TC9 1320 aa12.37□□□□□ -0.43
TRIM6-209ENST00000507320 PPP1R11O60927 126 aaPredicted RBP12.36□□□□□ -0.43
TRIM6-209ENST00000507320 SMARCA1P28370 1054 aa12.36□□□□□ -0.43
TRIM6-209ENST00000507320 CRHR2Q13324 411 aa12.36□□□□□ -0.43
TRIM6-209ENST00000507320 CUL4AQ13619 759 aa12.36□□□□□ -0.43
TRIM6-209ENST00000507320 CDC37Q16543 378 aaPredicted RBP12.36□□□□□ -0.43
TRIM6-209ENST00000507320 QRICH1Q2TAL8 776 aa12.36□□□□□ -0.43
TRIM6-209ENST00000507320 LBX2Q6XYB7 198 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms