RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ABRAQ8N0Z2 381 aa8.92□□□□□ -0.98
VCAN-207ENST00000507162 ZNF384Q8TF68 577 aa8.92□□□□□ -0.98
VCAN-207ENST00000507162 GDPD5Q8WTR4 605 aa8.92□□□□□ -0.98
VCAN-207ENST00000507162 PBXIP1Q96AQ6 731 aa8.92□□□□□ -0.98
VCAN-207ENST00000507162 MMP19Q99542 508 aa8.92□□□□□ -0.98
VCAN-207ENST00000507162 TANGO6Q9C0B7 1094 aa8.92□□□□□ -0.98
VCAN-207ENST00000507162 KIAA1683Q9H0B3 1180 aa8.92□□□□□ -0.98
VCAN-207ENST00000507162 ZHX1Q9UKY1 873 aaPredicted RBP8.92□□□□□ -0.98
VCAN-207ENST00000507162 SOWAHBA6NEL2 793 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 DUSP11O75319 330 aaKnown RBP8.91□□□□□ -0.98
VCAN-207ENST00000507162 VAMP4O75379 141 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 CD4P01730 458 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 ID4P47928 161 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 TIMM10P62072 90 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 PUS10Q3MIT2 529 aaKnown RBP8.91□□□□□ -0.98
VCAN-207ENST00000507162 ATG9AQ7Z3C6 839 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 PRRX2Q99811 253 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 TRPV6Q9H1D0 765 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 WNT8AQ9H1J5 351 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 LMCD1Q9NZU5 365 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 MTUS1Q9ULD2 1270 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 MYH13Q9UKX3 1938 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 BAHCC1Q9P281 2608 aa8.91□□□□□ -0.98
VCAN-207ENST00000507162 HLA-DOAP06340 250 aa8.9□□□□□ -0.98
VCAN-207ENST00000507162 ACTN1P12814 892 aa8.9□□□□□ -0.98
VCAN-207ENST00000507162 KCTD2Q14681 263 aa8.9□□□□□ -0.98
VCAN-207ENST00000507162 ZNF792Q3KQV3 632 aa8.9□□□□□ -0.98
VCAN-207ENST00000507162 ATF7IPQ6VMQ6 1270 aa8.9□□□□□ -0.98
VCAN-207ENST00000507162 SUGP1Q8IWZ8 645 aaKnown RBP8.9□□□□□ -0.98
VCAN-207ENST00000507162 NSUN4Q96CB9 384 aaKnown RBP8.9□□□□□ -0.98
VCAN-207ENST00000507162 NOC4LQ9BVI4 516 aaKnown RBP8.9□□□□□ -0.98
VCAN-207ENST00000507162 CABP5Q9NP86 173 aa8.9□□□□□ -0.98
VCAN-207ENST00000507162 AATFQ9NY61 560 aaKnown RBP eCLIP8.9□□□□□ -0.98
VCAN-207ENST00000507162 MUTYHQ9UIF7 546 aa8.9□□□□□ -0.98
VCAN-207ENST00000507162 TECTAO75443 2155 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 NCOR2Q9Y618 2525 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 BAG3O95817 575 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 SNAI1O95863 264 aaPredicted RBP8.89□□□□□ -0.99
VCAN-207ENST00000507162 IRS1P35568 1242 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 RFX5P48382 616 aaPredicted RBP8.89□□□□□ -0.99
VCAN-207ENST00000507162 BEX3Q00994 111 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 ZP2Q05996 745 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 ITGA7Q13683 1181 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 ABCB5Q2M3G0 1257 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 CERKLQ49MI3 558 aaPredicted RBP8.89□□□□□ -0.99
VCAN-207ENST00000507162 NOL8Q76FK4 1167 aaKnown RBP8.89□□□□□ -0.99
VCAN-207ENST00000507162 METTL16Q86W50 562 aaKnown RBP8.89□□□□□ -0.99
VCAN-207ENST00000507162 HERC6Q8IVU3 1022 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 MB21D1Q8N884 522 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 PHOSPHO2Q8TCD6 241 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 VWCEQ96DN2 955 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 SLC9A7Q96T83 725 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 ZBED2Q9BTP6 218 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 FTOQ9C0B1 505 aaKnown RBP eCLIP8.89□□□□□ -0.99
VCAN-207ENST00000507162 LRP2BPQ9P2M1 347 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 TRPC6Q9Y210 931 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 FAM50BQ9Y247 325 aa8.89□□□□□ -0.99
VCAN-207ENST00000507162 DIS3Q9Y2L1 958 aaKnown RBP8.89□□□□□ -0.99
VCAN-207ENST00000507162 ATRXP46100 2492 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 PKD1L2Q7Z442 2459 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 TMEM221A6NGB7 291 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 H0Y858 1186 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 M0R296 226 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 FLOT1O75955 427 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 SLC25A27O95847 323 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 CST5P28325 142 aaPredicted RBP8.88□□□□□ -0.99
VCAN-207ENST00000507162 CXCL17Q6UXB2 119 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 ADHFE1Q8IWW8 467 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 ATG4CQ96DT6 458 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 SUGCTQ9HAC7 445 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 TLR9Q9NR96 1032 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 A0A0G2JMZ2 1700 aa8.88□□□□□ -0.99
VCAN-207ENST00000507162 LCHNA4D1U4 455 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 B4GALT4O60513 344 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 PFKMP08237 780 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 CYP2C9P11712 490 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 PLCG2P16885 1265 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 SLC4A3P48751 1232 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 GJA9P57773 515 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 EXOSC9Q06265 439 aaKnown RBP8.87□□□□□ -0.99
VCAN-207ENST00000507162 ACVR2BQ13705 512 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 TMEM132BQ14DG7 1078 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 PKN1Q16512 942 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 CCDC144BQ3MJ40 725 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 PI16Q6UXB8 463 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 ASCL5Q7RTU5 278 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 BMP8AQ7Z5Y6 402 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 RNF135Q8IUD6 432 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 EDAQ92838 391 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 DDX11Q96FC9 970 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 AGBL1Q96MI9 1066 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 NEUROD6Q96NK8 337 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 IRF2BPLQ9H1B7 796 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 PRKAG3Q9UGI9 489 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 ZNFX1Q9P2E3 1918 aaKnown RBP8.87□□□□□ -0.99
VCAN-207ENST00000507162 ACACBO00763 2458 aa8.87□□□□□ -0.99
VCAN-207ENST00000507162 EP300Q09472 2414 aaPredicted RBP8.86□□□□□ -0.99
VCAN-207ENST00000507162 GVINP1Q7Z2Y8 2422 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 FLT1P17948 1338 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 DCHS1Q96JQ0 3298 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms