RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 PLEKP08567 350 aaPredicted RBP10.77□□□□□ -0.69
PHF3-208ENST00000506783 CDC25BP30305 580 aa10.77□□□□□ -0.69
PHF3-208ENST00000506783 C2orf54Q08AI8 447 aa10.77□□□□□ -0.69
PHF3-208ENST00000506783 HLTFQ14527 1009 aaKnown RBP eCLIP10.77□□□□□ -0.696e-10■□□□□ 10.6
PHF3-208ENST00000506783 CCDC42Q96M95 316 aa10.77□□□□□ -0.69
PHF3-208ENST00000506783 EXOC1Q9NV70 894 aa10.77□□□□□ -0.69
PHF3-208ENST00000506783 NCK2O43639 380 aa10.77□□□□□ -0.69
PHF3-208ENST00000506783 GUCY2FP51841 1108 aa10.77□□□□□ -0.69
PHF3-208ENST00000506783 SPA17Q15506 151 aa10.77□□□□□ -0.69
PHF3-208ENST00000506783 RDH13Q8NBN7 331 aa10.77□□□□□ -0.69
PHF3-208ENST00000506783 TMEM60Q9H2L4 133 aa10.77□□□□□ -0.69
PHF3-208ENST00000506783 SEC63Q9UGP8 760 aaKnown RBP10.77□□□□□ -0.69
PHF3-208ENST00000506783 SALL1Q9NSC2 1324 aa10.77□□□□□ -0.69
PHF3-208ENST00000506783 PPP6R2O75170 966 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 PLCD1P51178 756 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 RPS8P62241 208 aaKnown RBP10.76□□□□□ -0.69
PHF3-208ENST00000506783 VSNL1P62760 191 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 ITPK1Q13572 414 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 ZSCAN26Q16670 478 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 RRAGAQ7L523 313 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 PNKPQ96T60 521 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 HSD3B7Q9H2F3 369 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 GPR108Q9NPR9 543 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 TTC26A0AVF1 554 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 PMS1P54277 932 aaKnown RBP10.76□□□□□ -0.69
PHF3-208ENST00000506783 UBXN2AP68543 259 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 CCDC40Q4G0X9 1142 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 TRIM65Q6PJ69 517 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 PSDA5PKW4 1024 aaPredicted RBP10.76□□□□□ -0.69
PHF3-208ENST00000506783 POTEMA6NI47 508 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 BACH1O14867 736 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 RPN1P04843 607 aaKnown RBP10.76□□□□□ -0.69
PHF3-208ENST00000506783 SCG2P13521 617 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 COPB1P53618 953 aaKnown RBP10.76□□□□□ -0.69
PHF3-208ENST00000506783 UBE2SQ16763 222 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 DOK7Q18PE1 504 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 USH1GQ495M9 461 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 SPATA1Q5VX52 437 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 FOXR1Q6PIV2 292 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 CCDC47Q96A33 483 aaKnown RBP10.76□□□□□ -0.69
PHF3-208ENST00000506783 MED15Q96RN5 788 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 FHOD1Q9Y613 1164 aa10.76□□□□□ -0.69
PHF3-208ENST00000506783 CHMP2AO43633 222 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 ERLIN1O75477 346 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 TADA3O75528 432 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 LDHBP07195 334 aaKnown RBP10.75□□□□□ -0.69
PHF3-208ENST00000506783 NAA35Q5VZE5 725 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 CC2D1AQ6P1N0 951 aaPredicted RBP10.75□□□□□ -0.69
PHF3-208ENST00000506783 CCDC148Q8NFR7 591 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 UHMK1Q8TAS1 419 aaKnown RBP10.75□□□□□ -0.69
PHF3-208ENST00000506783 NAPGQ99747 312 aaPredicted RBP10.75□□□□□ -0.69
PHF3-208ENST00000506783 SRPRBQ9Y5M8 271 aaKnown RBP10.75□□□□□ -0.69
PHF3-208ENST00000506783 ANKRD26Q9UPS8 1709 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 RGPD2P0DJD1 1756 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 PDE4DIPQ5VU43 2346 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 KLRF2D3W0D1 207 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 MEIS1O00470 390 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 PSMA7O14818 248 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 IKBKBO14920 756 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 KIF20AO95235 890 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 HPDP32754 393 aaPredicted RBP10.75□□□□□ -0.69
PHF3-208ENST00000506783 USP8P40818 1118 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 GRIK5Q16478 980 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 TMTC2Q8N394 836 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 SH3RF3Q8TEJ3 882 aaPredicted RBP10.75□□□□□ -0.69
PHF3-208ENST00000506783 SH2D3AQ9BRG2 576 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 ADAM21Q9UKJ8 722 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 ADGRG1Q9Y653 693 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 EPN1Q9Y6I3 576 aaPredicted RBP10.75□□□□□ -0.69
PHF3-208ENST00000506783 PIK3C2AO00443 1686 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 SMCO2A6NFE2 343 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 TRAF5O00463 557 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 NKRFO15226 690 aaKnown RBP eCLIP10.75□□□□□ -0.69
PHF3-208ENST00000506783 PARP1P09874 1014 aaKnown RBP10.75□□□□□ -0.69
PHF3-208ENST00000506783 CYP4A11Q02928 519 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 NFIXQ14938 502 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 TBC1D9BQ66K14 1250 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 KLHL7Q8IXQ5 586 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 TSPYL1Q9H0U9 437 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 MLXIPQ9HAP2 919 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 ZBTB21Q9ULJ3 1066 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 MINPP1Q9UNW1 487 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 SAMM50Q9Y512 469 aa10.75□□□□□ -0.69
PHF3-208ENST00000506783 STX10O60499 249 aa10.74□□□□□ -0.69
PHF3-208ENST00000506783 GYPCP04921 128 aa10.74□□□□□ -0.69
PHF3-208ENST00000506783 CSF1RP07333 972 aa10.74□□□□□ -0.69
PHF3-208ENST00000506783 UTP14CQ5TAP6 766 aaKnown RBP10.74□□□□□ -0.69
PHF3-208ENST00000506783 KCTD1Q719H9 257 aa10.74□□□□□ -0.69
PHF3-208ENST00000506783 SND1Q7KZF4 910 aaKnown RBP eCLIP10.74□□□□□ -0.69
PHF3-208ENST00000506783 FCHSD1Q86WN1 690 aa10.74□□□□□ -0.69
PHF3-208ENST00000506783 SPICE1Q8N0Z3 855 aa10.74□□□□□ -0.69
PHF3-208ENST00000506783 CNBD1Q8NA66 436 aa10.74□□□□□ -0.69
PHF3-208ENST00000506783 IPO4Q8TEX9 1081 aaKnown RBP10.74□□□□□ -0.69
PHF3-208ENST00000506783 FAM84BQ96KN1 310 aaPredicted RBP10.74□□□□□ -0.69
PHF3-208ENST00000506783 HYOU1Q9Y4L1 999 aa10.74□□□□□ -0.69
PHF3-208ENST00000506783 MORC2Q9Y6X9 1032 aaPredicted RBP10.74□□□□□ -0.69
PHF3-208ENST00000506783 MROH5Q6ZUA9 1318 aa10.74□□□□□ -0.69
PHF3-208ENST00000506783 ADAMTSL3P82987 1691 aa10.74□□□□□ -0.69
PHF3-208ENST00000506783 SFI1A8K8P3 1242 aa10.74□□□□□ -0.69
PHF3-208ENST00000506783 EFCAB8A8MWE9 144 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms