RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 INHBEP58166 350 aa4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 TRIM26Q12899 539 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 EAPPQ56P03 285 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 MEI1Q5TIA1 1274 aa4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 KRTAP5-11Q6L8G4 156 aa4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 ANKS4BQ8N8V4 417 aa4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 SPATA25Q9BR10 227 aa4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 PCSK5Q92824 1860 aa4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 CHMP4BP1P59074 171 aa4.76□□□□□ -1.65
TOPBP1-205ENST00000506779 PSMD2Q13200 908 aa4.76□□□□□ -1.65
TOPBP1-205ENST00000506779 OLFML2BQ68BL8 750 aa4.76□□□□□ -1.65
TOPBP1-205ENST00000506779 TSPYL5Q86VY4 417 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-205ENST00000506779 DTWD2Q8NBA8 298 aa4.76□□□□□ -1.65
TOPBP1-205ENST00000506779 GPR62Q9BZJ7 368 aa4.76□□□□□ -1.65
TOPBP1-205ENST00000506779 RNF19AQ9NV58 838 aa4.76□□□□□ -1.65
TOPBP1-205ENST00000506779 TLR6Q9Y2C9 796 aa4.76□□□□□ -1.65
TOPBP1-205ENST00000506779 CORINQ9Y5Q5 1042 aa4.76□□□□□ -1.65
TOPBP1-205ENST00000506779 A0A1B0GTL3 188 aa4.75□□□□□ -1.65
TOPBP1-205ENST00000506779 AMHP03971 560 aa4.75□□□□□ -1.65
TOPBP1-205ENST00000506779 SDHBP21912 280 aa4.75□□□□□ -1.65
TOPBP1-205ENST00000506779 LIPIQ6XZB0 460 aa4.75□□□□□ -1.65
TOPBP1-205ENST00000506779 ADGRG2Q8IZP9 1017 aa4.75□□□□□ -1.65
TOPBP1-205ENST00000506779 RNF141Q8WVD5 230 aa4.75□□□□□ -1.65
TOPBP1-205ENST00000506779 KLHL3Q9UH77 587 aa4.75□□□□□ -1.65
TOPBP1-205ENST00000506779 PCDHA5Q9Y5H7 936 aa4.75□□□□□ -1.65
TOPBP1-205ENST00000506779 PCDHA11Q9Y5I1 949 aa4.75□□□□□ -1.65
TOPBP1-205ENST00000506779 ANKRD33BA6NCL7 494 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 UPK3BL1B0FP48 263 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 UPK3BL2E5RIL1 263 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 ABLIM1O14639 778 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 BUB1BO60566 1050 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 LMO1P25800 156 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 ST13P50502 369 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 TGFB2P61812 414 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 XPCQ01831 940 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 DUSP4Q13115 394 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 CDSNQ15517 529 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 TAF1CQ15572 869 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 CLEC16AQ2KHT3 1053 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 LRCH2Q5VUJ6 765 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 PHC3Q8NDX5 983 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 CHST13Q8NET6 341 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 NOC4LQ9BVI4 516 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 PARP2Q9UGN5 583 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 TSC22D4Q9Y3Q8 395 aa4.74□□□□□ -1.65
TOPBP1-205ENST00000506779 F6X3S4 739 aa4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 NOBOXO60393 691 aa4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 VWA3BQ502W6 1294 aa4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 DNAJC14Q6Y2X3 702 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 BNC2Q6ZN30 1099 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 CCDC84Q86UT8 332 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 PHACTR4Q8IZ21 702 aa4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 NLGN1Q8N2Q7 840 aa4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 ASPNQ9BXN1 380 aa4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 LNPKQ9C0E8 428 aa4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 GZF1Q9H116 711 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 ASCC2Q9H1I8 757 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 CRTAC1Q9NQ79 661 aa4.73□□□□□ -1.65
TOPBP1-205ENST00000506779 LTBP3Q9NS15 1303 aa4.72□□□□□ -1.65
TOPBP1-205ENST00000506779 ZBTB7CA1YPR0 619 aa4.72□□□□□ -1.65
TOPBP1-205ENST00000506779 LRRN2O75325 713 aa4.72□□□□□ -1.65
TOPBP1-205ENST00000506779 NCKAP1LP55160 1127 aa4.72□□□□□ -1.65
TOPBP1-205ENST00000506779 CAMK2GQ13555 558 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-205ENST00000506779 TMEM201Q5SNT2 666 aa4.72□□□□□ -1.65
TOPBP1-205ENST00000506779 SLFN12Q8IYM2 578 aa4.72□□□□□ -1.65
TOPBP1-205ENST00000506779 LINC01599Q8WXQ3 324 aa4.72□□□□□ -1.65
TOPBP1-205ENST00000506779 KISS1RQ969F8 398 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-205ENST00000506779 KREMEN1Q96MU8 473 aa4.72□□□□□ -1.65
TOPBP1-205ENST00000506779 REV1Q9UBZ9 1251 aa4.72□□□□□ -1.65
TOPBP1-205ENST00000506779 F13A1P00488 732 aa4.71□□□□□ -1.66
TOPBP1-205ENST00000506779 PF4P02776 101 aa4.71□□□□□ -1.66
TOPBP1-205ENST00000506779 DAB2P98082 770 aa4.71□□□□□ -1.66
TOPBP1-205ENST00000506779 LMNB2Q03252 620 aa4.71□□□□□ -1.66
TOPBP1-205ENST00000506779 SNAP47Q5SQN1 464 aa4.71□□□□□ -1.66
TOPBP1-205ENST00000506779 GATAD2BQ8WXI9 593 aa4.71□□□□□ -1.66
TOPBP1-205ENST00000506779 CCDC74BQ96LY2 380 aa4.71□□□□□ -1.66
TOPBP1-205ENST00000506779 MRS2Q9HD23 443 aa4.71□□□□□ -1.66
TOPBP1-205ENST00000506779 DLL4Q9NR61 685 aa4.71□□□□□ -1.66
TOPBP1-205ENST00000506779 RBM47A0AV96 593 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 SHISA3A0PJX4 238 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 CHURC1-FNTBB4DL54 471 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 HTR3BO95264 441 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 GBP1P32455 592 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 GBP2P32456 591 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 LIMS1P48059 325 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 PURAQ00577 322 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 TEKQ02763 1124 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 MLECQ14165 292 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 CDCP2Q5VXM1 449 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 RELL1Q8IUW5 271 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 FAM161BQ96MY7 647 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 KLHL14Q9P2G3 628 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 VTI1BQ9UEU0 232 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 SUSD2Q9UGT4 822 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 ST6GALNAC2Q9UJ37 374 aa4.7□□□□□ -1.66
TOPBP1-205ENST00000506779 USP31Q70CQ4 1352 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 SSU72P8A0A1W2PR75 194 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 FAM221AA4D161 298 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 KRTAP29-1A8MX34 341 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 RPL10P27635 214 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms