RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 USP6NLQ92738 828 aa21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 SLC38A10Q9HBR0 1119 aa21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 SENP2Q9HC62 589 aa21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 ZNF236Q9UL36 1845 aa21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 BRCA2P51587 3418 aa21.41■■□□□ 1.02
PDLIM7-216ENST00000506537 ZNF543Q08ER8 600 aa21.41■■□□□ 1.02
PDLIM7-216ENST00000506537 WDR78Q5VTH9 848 aa21.41■■□□□ 1.02
PDLIM7-216ENST00000506537 RASEFQ8IZ41 740 aa21.41■■□□□ 1.02
PDLIM7-216ENST00000506537 CHURC1Q8WUH1 139 aa21.41■■□□□ 1.02
PDLIM7-216ENST00000506537 ZNF333Q96JL9 665 aa21.41■■□□□ 1.02
PDLIM7-216ENST00000506537 KAT14Q9H8E8 782 aa21.41■■□□□ 1.02
PDLIM7-216ENST00000506537 ELNP15502 786 aa21.4■■□□□ 1.02
PDLIM7-216ENST00000506537 PTPREP23469 700 aa21.4■■□□□ 1.02
PDLIM7-216ENST00000506537 GRK4P32298 578 aa21.4■■□□□ 1.02
PDLIM7-216ENST00000506537 STAT3P40763 770 aa21.4■■□□□ 1.02
PDLIM7-216ENST00000506537 IKQ13123 557 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-216ENST00000506537 IFIT1BQ5T764 474 aaKnown RBP21.4■■□□□ 1.02
PDLIM7-216ENST00000506537 BTNL9Q6UXG8 535 aa21.4■■□□□ 1.02
PDLIM7-216ENST00000506537 RIOX2Q8IUF8 465 aa21.4■■□□□ 1.02
PDLIM7-216ENST00000506537 SOCS4Q8WXH5 440 aa21.4■■□□□ 1.02
PDLIM7-216ENST00000506537 GPCPD1Q9NPB8 672 aa21.4■■□□□ 1.02
PDLIM7-216ENST00000506537 PRR12Q9ULL5 1215 aa21.4■■□□□ 1.02
PDLIM7-216ENST00000506537 IFIT3O14879 490 aaKnown RBP21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 ATP2A1O14983 1001 aa21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 ADCY3O60266 1144 aa21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 ZBED4O75132 1171 aa21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 SLC16A2P36021 539 aa21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 SNAP25P60880 206 aa21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 GRB14Q14449 540 aa21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 SNRNP48Q6IEG0 339 aaKnown RBP21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 NCAPG2Q86XI2 1143 aa21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 SLAIN1Q8ND83 568 aa21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 NUDT12Q9BQG2 462 aa21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 TEX13BQ9BXU2 312 aa21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 CWC22Q9HCG8 908 aaKnown RBP21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 RAVER2Q9HCJ3 691 aaKnown RBP21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 RIPK3Q9Y572 518 aa21.39■■□□□ 1.01
PDLIM7-216ENST00000506537 ZNF536O15090 1300 aa21.38■■□□□ 1.01
PDLIM7-216ENST00000506537 SLC15A5A6NIM6 579 aa21.38■■□□□ 1.01
PDLIM7-216ENST00000506537 GOLGA8HP0CJ92 632 aa21.38■■□□□ 1.01
PDLIM7-216ENST00000506537 CYP2B6P20813 491 aa21.38■■□□□ 1.01
PDLIM7-216ENST00000506537 RNF20Q5VTR2 975 aa21.38■■□□□ 1.01
PDLIM7-216ENST00000506537 CPXCR1Q8N123 301 aa21.38■■□□□ 1.01
PDLIM7-216ENST00000506537 IGDCC4Q8TDY8 1250 aa21.38■■□□□ 1.01
PDLIM7-216ENST00000506537 PXYLP1Q8TE99 480 aa21.38■■□□□ 1.01
PDLIM7-216ENST00000506537 KCNB2Q92953 911 aa21.38■■□□□ 1.01
PDLIM7-216ENST00000506537 MROH8Q9H579 483 aa21.38■■□□□ 1.01
PDLIM7-216ENST00000506537 GPHNQ9NQX3 736 aaPredicted RBP21.38■■□□□ 1.01
PDLIM7-216ENST00000506537 PRC1O43663 620 aa21.37■■□□□ 1.01
PDLIM7-216ENST00000506537 REC8O95072 547 aa21.37■■□□□ 1.01
PDLIM7-216ENST00000506537 SLC25A27O95847 323 aa21.37■■□□□ 1.01
PDLIM7-216ENST00000506537 HSPA4P34932 840 aa21.37■■□□□ 1.01
PDLIM7-216ENST00000506537 MAP2K5Q13163 448 aa21.37■■□□□ 1.01
PDLIM7-216ENST00000506537 ADCK5Q3MIX3 580 aa21.37■■□□□ 1.01
PDLIM7-216ENST00000506537 TSGA10IPQ3SY00 556 aa21.37■■□□□ 1.01
PDLIM7-216ENST00000506537 SYDE2Q5VT97 1194 aa21.37■■□□□ 1.01
PDLIM7-216ENST00000506537 CPVLQ9H3G5 476 aa21.37■■□□□ 1.01
PDLIM7-216ENST00000506537 IVNS1ABPQ9Y6Y0 642 aa21.37■■□□□ 1.01
PDLIM7-216ENST00000506537 FDX1P10109 184 aa21.36■■□□□ 1.01
PDLIM7-216ENST00000506537 RGS2P41220 211 aa21.36■■□□□ 1.01
PDLIM7-216ENST00000506537 OAZ1P54368 228 aa21.36■■□□□ 1.01
PDLIM7-216ENST00000506537 WTAPQ15007 396 aa21.36■■□□□ 1.01
PDLIM7-216ENST00000506537 TMEM67Q5HYA8 995 aa21.36■■□□□ 1.01
PDLIM7-216ENST00000506537 TRIB2Q92519 343 aa21.36■■□□□ 1.01
PDLIM7-216ENST00000506537 APBA2Q99767 749 aa21.36■■□□□ 1.01
PDLIM7-216ENST00000506537 RANBP17Q9H2T7 1088 aaKnown RBP21.36■■□□□ 1.01
PDLIM7-216ENST00000506537 LY9Q9HBG7 655 aa21.36■■□□□ 1.01
PDLIM7-216ENST00000506537 RBBP6Q7Z6E9 1792 aaKnown RBP21.36■■□□□ 1.01
PDLIM7-216ENST00000506537 MYCP01106 439 aaPredicted RBP21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 INHAP05111 366 aa21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 XRCC5P13010 732 aaKnown RBP21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 TAL1P17542 331 aaPredicted RBP21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 ADORA2AP29274 412 aa21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 MCM5P33992 734 aa21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 SOX10P56693 466 aa21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 SART3Q15020 963 aaKnown RBP21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 MTFR1Q15390 333 aa21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 CCL14Q16627 93 aa21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 GPATCH4Q5T3I0 446 aaKnown RBP21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 NBPF11Q86T75 865 aa21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 AGBL1Q96MI9 1066 aa21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 CTDP1Q9Y5B0 961 aaPredicted RBP21.35■■□□□ 1.01
PDLIM7-216ENST00000506537 ERICH2A1L162 156 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 SH2B2O14492 632 aaPredicted RBP21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 STRNO43815 780 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 HOXC6P09630 235 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 COPB2P35606 906 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 TRIM32Q13049 653 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 ASPRV1Q53RT3 343 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 CCDC174Q6PII3 467 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 ABRAQ8N0Z2 381 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 NPLOC4Q8TAT6 608 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 NEK1Q96PY6 1258 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 MTA3Q9BTC8 594 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 LRRC2Q9BYS8 371 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 UBA5Q9GZZ9 404 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 SNX14Q9Y5W7 946 aa21.34■■□□□ 1.01
PDLIM7-216ENST00000506537 COBLO75128 1261 aa21.33■■□□□ 1.01
PDLIM7-216ENST00000506537 HMGCRP04035 888 aa21.33■■□□□ 1.01
PDLIM7-216ENST00000506537 PARP1P09874 1014 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms