RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 PARK7Q99497 189 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 SLF1Q9BQI6 1058 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 PAGR1Q9BTK6 254 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 ZFYVE28Q9HCC9 887 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 VAT1LQ9HCJ6 419 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 TXNRD2Q9NNW7 524 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 FEM1BQ9UK73 627 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 PNMA3Q9UL41 463 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 PPP1R9AQ9ULJ8 1098 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 TPCN1Q9ULQ1 816 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 HPS5Q9UPZ3 1129 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 PARP14Q460N5 1801 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 PALM3A6NDB9 673 aaPredicted RBP15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 GOLGA8AA7E2F4 631 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 GOLGA8BA8MQT2 603 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 DTNBO60941 627 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 PLEKHA8P1O95397 391 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 LARGE1O95461 756 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 ALDH1A1P00352 501 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 PDIA3P30101 505 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 STAT2P52630 851 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 CCT2P78371 535 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 RABEP1Q15276 862 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 ASPRV1Q53RT3 343 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 SYDE2Q5VT97 1194 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 NBPF11Q86T75 865 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 FBXL16Q8N461 479 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 PIBF1Q8WXW3 757 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 ALDH8A1Q9H2A2 487 aaPredicted RBP15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 ZCCHC17Q9NP64 241 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 BTBD7Q9P203 1132 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 RBPJLQ9UBG7 517 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 PRR12Q9ULL5 1215 aa15.47■□□□□ 0.07
PDLIM7-212ENST00000504380 ADGRA2Q96PE1 1338 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 KLRF2D3W0D1 207 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 CNMDO75829 334 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 CD2BP2O95400 341 aaKnown RBP15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 TAL1P17542 331 aaPredicted RBP15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 CDC27P30260 824 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 SLC4A3P48751 1232 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 Q3C1V9 767 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 FAM160B2Q86V87 743 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 CCDC82Q8N4S0 544 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 ANKRD13CQ8N6S4 541 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 FANCBQ8NB91 859 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 CTCFLQ8NI51 663 aaPredicted RBP15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 CHURC1Q8WUH1 139 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 MCOLN1Q9GZU1 580 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 NCOA5Q9HCD5 579 aaKnown RBP15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 FAM217BQ9NTX9 383 aaPredicted RBP15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 HOXC10Q9NYD6 342 aa15.46■□□□□ 0.07
PDLIM7-212ENST00000504380 VWA5AO00534 786 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 DHX16O60231 1041 aaKnown RBP15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 TLR2O60603 784 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 PPFIA3O75145 1194 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 CALM1P0DP23 149 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 CALM2P0DP24 149 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 CALM3P0DP25 149 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 ADD1P35611 737 aaKnown RBP15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 METAP2P50579 478 aaKnown RBP eCLIP15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 EVCP57679 992 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 RTN1Q16799 776 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 GPATCH4Q5T3I0 446 aaKnown RBP15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 CCDC174Q6PII3 467 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 C17orf99Q6UX52 265 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 BTNL9Q6UXG8 535 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 ADGRF4Q8IZF3 695 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 SRBD1Q8N5C6 995 aaKnown RBP15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 NECAB1Q8N987 351 aa15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 PRPF38AQ8NAV1 312 aaKnown RBP15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 COL11A1P12107 1806 aaPredicted RBP15.45■□□□□ 0.06
PDLIM7-212ENST00000504380 BAZ2BQ9UIF8 2168 aaKnown RBP15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 hCG_1642624A0A1W2PR95 340 aa15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 CYTH3O43739 400 aa15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 PLA2G6O60733 806 aa15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 PLS1Q14651 629 aa15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 TMEM132BQ14DG7 1078 aa15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 ANKRD1Q15327 319 aa15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 LBX2Q6XYB7 198 aa15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 CPXCR1Q8N123 301 aa15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 REPS2Q8NFH8 660 aa15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 JMJD4Q9H9V9 463 aa15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 RAVER2Q9HCJ3 691 aaKnown RBP15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 ADAMTS5Q9UNA0 930 aa15.44■□□□□ 0.06
PDLIM7-212ENST00000504380 ZBED4O75132 1171 aa15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 BCRP11274 1271 aa15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 KIF5BP33176 963 aa15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 GCLCP48506 637 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 ME3Q16798 604 aa15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 TMTC3Q6ZXV5 915 aa15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 ZNF274Q96GC6 653 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 MAP3K14Q99558 947 aa15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 SAGE1Q9NXZ1 904 aa15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 RABGAP1Q9Y3P9 1069 aa15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 CTDP1Q9Y5B0 961 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 TNRC18O15417 2968 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 MYPNQ86TC9 1320 aa15.43■□□□□ 0.06
PDLIM7-212ENST00000504380 GPR25O00155 361 aa15.42■□□□□ 0.06
PDLIM7-212ENST00000504380 ERVK-9P63128 1117 aa15.42■□□□□ 0.06
PDLIM7-212ENST00000504380 ERVK-24P63145 666 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms