RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 DDX10Q13206 875 aaKnown RBP15.4■□□□□ 0.06
LSM6-204ENST00000504181 CERKLQ49MI3 558 aaPredicted RBP15.4■□□□□ 0.06
LSM6-204ENST00000504181 NAA16Q6N069 864 aaPredicted RBP15.4■□□□□ 0.06
LSM6-204ENST00000504181 HFE2Q6ZVN8 426 aa15.4■□□□□ 0.06
LSM6-204ENST00000504181 SPRED2Q7Z698 418 aa15.4■□□□□ 0.06
LSM6-204ENST00000504181 ADGRA1Q86SQ6 560 aa15.4■□□□□ 0.06
LSM6-204ENST00000504181 RPUSD2Q8IZ73 545 aaKnown RBP15.4■□□□□ 0.06
LSM6-204ENST00000504181 MB21D1Q8N884 522 aa15.4■□□□□ 0.06
LSM6-204ENST00000504181 ATG4CQ96DT6 458 aa15.4■□□□□ 0.06
LSM6-204ENST00000504181 SCLYQ96I15 445 aa15.4■□□□□ 0.06
LSM6-204ENST00000504181 UBE2ZQ9H832 354 aaPredicted RBP15.4■□□□□ 0.06
LSM6-204ENST00000504181 ZHX1Q9UKY1 873 aaPredicted RBP15.4■□□□□ 0.06
LSM6-204ENST00000504181 ADCY6O43306 1168 aa15.39■□□□□ 0.05
LSM6-204ENST00000504181 DUSP11O75319 330 aaKnown RBP15.39■□□□□ 0.05
LSM6-204ENST00000504181 TTLL4Q14679 1199 aa15.39■□□□□ 0.05
LSM6-204ENST00000504181 CABP5Q9NP86 173 aa15.39■□□□□ 0.05
LSM6-204ENST00000504181 DIS3Q9Y2L1 958 aaKnown RBP15.39■□□□□ 0.05
LSM6-204ENST00000504181 SALL2Q9Y467 1007 aaPredicted RBP15.39■□□□□ 0.05
LSM6-204ENST00000504181 PLXNA3P51805 1871 aa15.39■□□□□ 0.05
LSM6-204ENST00000504181 LPXNO60711 386 aa15.38■□□□□ 0.05
LSM6-204ENST00000504181 GUCY1A2P33402 732 aa15.38■□□□□ 0.05
LSM6-204ENST00000504181 PPP4CP60510 307 aa15.38■□□□□ 0.05
LSM6-204ENST00000504181 KCTD2Q14681 263 aa15.38■□□□□ 0.05
LSM6-204ENST00000504181 PRSS33Q8NF86 280 aa15.38■□□□□ 0.05
LSM6-204ENST00000504181 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.38■□□□□ 0.05
LSM6-204ENST00000504181 VWCEQ96DN2 955 aa15.38■□□□□ 0.05
LSM6-204ENST00000504181 NEUROD6Q96NK8 337 aa15.38■□□□□ 0.05
LSM6-204ENST00000504181 NOC4LQ9BVI4 516 aaKnown RBP15.38■□□□□ 0.05
LSM6-204ENST00000504181 ZFHX2Q9C0A1 2572 aaPredicted RBP15.38■□□□□ 0.05
LSM6-204ENST00000504181 ZNF536O15090 1300 aa15.38■□□□□ 0.05
LSM6-204ENST00000504181 TECTAO75443 2155 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 A0A1W2PRG0 241 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 FLOT1O75955 427 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 SLC25A27O95847 323 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 KCNA5P22460 613 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 MCAMP43121 646 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 DYNLL1P63167 89 aaKnown RBP15.37■□□□□ 0.05
LSM6-204ENST00000504181 TFCP2Q12800 502 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 TMEM132BQ14DG7 1078 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 SEPT2Q15019 361 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 LEXMQ3ZCV2 418 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 GNASQ5JWF2 1037 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 KIAA1755Q5JYT7 1200 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 GDPD5Q8WTR4 605 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 SPC25Q9HBM1 224 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 SERPINB13Q9UIV8 391 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 ATG2AQ2TAZ0 1938 aa15.37■□□□□ 0.05
LSM6-204ENST00000504181 POTEB3A0JP26 581 aa15.36■□□□□ 0.05
LSM6-204ENST00000504181 SNAI1O95863 264 aaPredicted RBP15.36■□□□□ 0.05
LSM6-204ENST00000504181 ARID4AP29374 1257 aaPredicted RBP15.36■□□□□ 0.05
LSM6-204ENST00000504181 GORABQ5T7V8 394 aa15.36■□□□□ 0.05
LSM6-204ENST00000504181 PTCRAQ6ISU1 281 aaPredicted RBP15.36■□□□□ 0.05
LSM6-204ENST00000504181 POTEBQ6S5H4 581 aa15.36■□□□□ 0.05
LSM6-204ENST00000504181 UPF3AQ9H1J1 476 aaKnown RBP15.36■□□□□ 0.05
LSM6-204ENST00000504181 PRKRIP1Q9H875 184 aaPredicted RBP15.36■□□□□ 0.05
LSM6-204ENST00000504181 AKAP2Q9Y2D5 859 aa15.36■□□□□ 0.05
LSM6-204ENST00000504181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.36■□□□□ 0.05
LSM6-204ENST00000504181 NLRC5Q86WI3 1866 aa15.35■□□□□ 0.05
LSM6-204ENST00000504181 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.35■□□□□ 0.05
LSM6-204ENST00000504181 GJA9P57773 515 aa15.35■□□□□ 0.05
LSM6-204ENST00000504181 BEX3Q00994 111 aa15.35■□□□□ 0.05
LSM6-204ENST00000504181 DEFB128Q7Z7B8 93 aa15.35■□□□□ 0.05
LSM6-204ENST00000504181 WDR63Q8IWG1 891 aa15.35■□□□□ 0.05
LSM6-204ENST00000504181 MFSD14AQ96MC6 490 aa15.35■□□□□ 0.05
LSM6-204ENST00000504181 TRPV6Q9H1D0 765 aa15.35■□□□□ 0.05
LSM6-204ENST00000504181 B4GALT4O60513 344 aa15.34■□□□□ 0.05
LSM6-204ENST00000504181 GFRA3O60609 400 aa15.34■□□□□ 0.05
LSM6-204ENST00000504181 SHMT1P34896 483 aa15.34■□□□□ 0.05
LSM6-204ENST00000504181 SLC43A3Q8NBI5 491 aa15.34■□□□□ 0.05
LSM6-204ENST00000504181 SLC9A7Q96T83 725 aa15.34■□□□□ 0.05
LSM6-204ENST00000504181 EHD4Q9H223 541 aa15.34■□□□□ 0.05
LSM6-204ENST00000504181 COPRSQ9NQ92 184 aa15.34■□□□□ 0.05
LSM6-204ENST00000504181 SNRKQ9NRH2 765 aa15.34■□□□□ 0.05
LSM6-204ENST00000504181 MYO15AQ9UKN7 3530 aa15.34■□□□□ 0.05
LSM6-204ENST00000504181 BAZ2AQ9UIF9 1905 aaKnown RBP15.34■□□□□ 0.05
LSM6-204ENST00000504181 DCHS1Q96JQ0 3298 aa15.34■□□□□ 0.05
LSM6-204ENST00000504181 MPHOSPH10O00566 681 aaKnown RBP15.33■□□□□ 0.04
LSM6-204ENST00000504181 UBTFL1P0CB47 393 aaPredicted RBP15.33■□□□□ 0.04
LSM6-204ENST00000504181 USP5P45974 858 aa15.33■□□□□ 0.04
LSM6-204ENST00000504181 PTPN5P54829 565 aa15.33■□□□□ 0.04
LSM6-204ENST00000504181 ACVR2BQ13705 512 aa15.33■□□□□ 0.04
LSM6-204ENST00000504181 CCDC144BQ3MJ40 725 aa15.33■□□□□ 0.04
LSM6-204ENST00000504181 CXCL17Q6UXB2 119 aa15.33■□□□□ 0.04
LSM6-204ENST00000504181 RIOX2Q8IUF8 465 aa15.33■□□□□ 0.04
LSM6-204ENST00000504181 SPICE1Q8N0Z3 855 aa15.33■□□□□ 0.04
LSM6-204ENST00000504181 AGBL1Q96MI9 1066 aa15.33■□□□□ 0.04
LSM6-204ENST00000504181 GRXCR2A6NFK2 248 aa15.32■□□□□ 0.04
LSM6-204ENST00000504181 KIF28PB7ZC32 967 aa15.32■□□□□ 0.04
LSM6-204ENST00000504181 CTAGE5O15320 804 aa15.32■□□□□ 0.04
LSM6-204ENST00000504181 PFKMP08237 780 aa15.32■□□□□ 0.04
LSM6-204ENST00000504181 ITGA7Q13683 1181 aa15.32■□□□□ 0.04
LSM6-204ENST00000504181 HERC6Q8IVU3 1022 aa15.32■□□□□ 0.04
LSM6-204ENST00000504181 MRPL50Q8N5N7 158 aaKnown RBP15.32■□□□□ 0.04
LSM6-204ENST00000504181 MSL3Q8N5Y2 521 aaKnown RBP15.32■□□□□ 0.04
LSM6-204ENST00000504181 LMCD1Q9NZU5 365 aa15.32■□□□□ 0.04
LSM6-204ENST00000504181 PTPRCP08575 1304 aa15.32■□□□□ 0.04
LSM6-204ENST00000504181 ACTN1P12814 892 aa15.31■□□□□ 0.04
LSM6-204ENST00000504181 STAT3P40763 770 aa15.31■□□□□ 0.04
LSM6-204ENST00000504181 IER5LQ5T953 404 aa15.31■□□□□ 0.04
LSM6-204ENST00000504181 MAMDC4Q6UXC1 1216 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms