RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 TROAPQ12815 778 aa13□□□□□ -0.33
VCAN-205ENST00000503923 GRM4Q14833 912 aa13□□□□□ -0.33
VCAN-205ENST00000503923 Q3C1V9 767 aa13□□□□□ -0.33
VCAN-205ENST00000503923 TTBK2Q6IQ55 1244 aa13□□□□□ -0.33
VCAN-205ENST00000503923 Q6ZUG5 572 aa13□□□□□ -0.33
VCAN-205ENST00000503923 ZNF654Q8IZM8 581 aa13□□□□□ -0.33
VCAN-205ENST00000503923 FBXL16Q8N461 479 aa13□□□□□ -0.33
VCAN-205ENST00000503923 CD99L2Q8TCZ2 262 aa13□□□□□ -0.33
VCAN-205ENST00000503923 IL17RAQ96F46 866 aa13□□□□□ -0.33
VCAN-205ENST00000503923 BTBD7Q9P203 1132 aa13□□□□□ -0.33
VCAN-205ENST00000503923 CTDP1Q9Y5B0 961 aaPredicted RBP13□□□□□ -0.33
VCAN-205ENST00000503923 SLC12A7Q9Y666 1083 aa13□□□□□ -0.33
VCAN-205ENST00000503923 PEX10O60683 326 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 GNRH1P01148 92 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 GOLGA8HP0CJ92 632 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 CALM1P0DP23 149 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 CALM2P0DP24 149 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 CALM3P0DP25 149 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 SLC16A2P36021 539 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 PSMC4P43686 418 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 FCGRTP55899 365 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 TMEM132BQ14DG7 1078 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 SYDE2Q5VT97 1194 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 SYNE3Q6ZMZ3 975 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
VCAN-205ENST00000503923 REPS2Q8NFH8 660 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 NUP133Q8WUM0 1156 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 MAP3K14Q99558 947 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 C22orf23Q9BZE7 217 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 SPATC1LQ9H0A9 340 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 SLC38A10Q9HBR0 1119 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 PRR12Q9ULL5 1215 aa12.99□□□□□ -0.33
VCAN-205ENST00000503923 COL11A1P12107 1806 aaPredicted RBP12.99□□□□□ -0.33
VCAN-205ENST00000503923 MGAMO43451 1857 aa12.98□□□□□ -0.33
VCAN-205ENST00000503923 PALM3A6NDB9 673 aaPredicted RBP12.98□□□□□ -0.33
VCAN-205ENST00000503923 ATP2A1O14983 1001 aa12.98□□□□□ -0.33
VCAN-205ENST00000503923 FMNL1O95466 1100 aaPredicted RBP12.98□□□□□ -0.33
VCAN-205ENST00000503923 MAPK4P31152 587 aa12.98□□□□□ -0.33
VCAN-205ENST00000503923 KIF5BP33176 963 aa12.98□□□□□ -0.33
VCAN-205ENST00000503923 OAZ1P54368 228 aa12.98□□□□□ -0.33
VCAN-205ENST00000503923 PLS1Q14651 629 aa12.98□□□□□ -0.33
VCAN-205ENST00000503923 CTCFLQ8NI51 663 aaPredicted RBP12.98□□□□□ -0.33
VCAN-205ENST00000503923 MYL10Q9BUA6 226 aa12.98□□□□□ -0.33
VCAN-205ENST00000503923 AGXT2Q9BYV1 514 aa12.98□□□□□ -0.33
VCAN-205ENST00000503923 UPF3BQ9BZI7 483 aaKnown RBP12.98□□□□□ -0.33
VCAN-205ENST00000503923 ARHGAP39Q9C0H5 1083 aa12.98□□□□□ -0.33
VCAN-205ENST00000503923 EFCC1Q9HA90 598 aa12.98□□□□□ -0.33
VCAN-205ENST00000503923 MAD2L2Q9UI95 211 aa12.98□□□□□ -0.33
VCAN-205ENST00000503923 KLRF2D3W0D1 207 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 TNPO2O14787 897 aaKnown RBP12.97□□□□□ -0.33
VCAN-205ENST00000503923 ECM2O94769 699 aaPredicted RBP12.97□□□□□ -0.33
VCAN-205ENST00000503923 SLC25A27O95847 323 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 HOXD10P28358 340 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 CTGFP29279 349 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 COPB2P35606 906 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 STAT3P40763 770 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 RBM25P49756 843 aaKnown RBP12.97□□□□□ -0.33
VCAN-205ENST00000503923 APOA5Q6Q788 366 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 CTU1Q7Z7A3 348 aaKnown RBP12.97□□□□□ -0.33
VCAN-205ENST00000503923 RIOX2Q8IUF8 465 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 CPXCR1Q8N123 301 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 STAG2Q8N3U4 1231 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 SHCBP1Q8NEM2 672 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 BRF1Q92994 677 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 COA7Q96BR5 231 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 TRIM47Q96LD4 638 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 MOV10L1Q9BXT6 1211 aaKnown RBP12.97□□□□□ -0.33
VCAN-205ENST00000503923 TEX13BQ9BXU2 312 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 BACH2Q9BYV9 841 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 UBA5Q9GZZ9 404 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 PORCNQ9H237 461 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 RANBP17Q9H2T7 1088 aaKnown RBP12.97□□□□□ -0.33
VCAN-205ENST00000503923 CWC22Q9HCG8 908 aaKnown RBP12.97□□□□□ -0.33
VCAN-205ENST00000503923 PDRG1Q9NUG6 133 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 ZNF214Q9UL59 606 aaPredicted RBP12.97□□□□□ -0.33
VCAN-205ENST00000503923 TRIM17Q9Y577 477 aa12.97□□□□□ -0.33
VCAN-205ENST00000503923 KLF18A0A0U1RQI7 1052 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 ZBTB43O43298 467 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 DHX16O60231 1041 aaKnown RBP12.96□□□□□ -0.33
VCAN-205ENST00000503923 ERCC3P19447 782 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 GNAQP50148 359 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 RCAN1P53805 252 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 CAP1Q01518 475 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 SNRNP48Q6IEG0 339 aaKnown RBP12.96□□□□□ -0.33
VCAN-205ENST00000503923 OTOP1Q7RTM1 612 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 MICU3Q86XE3 530 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 LZTS2Q9BRK4 669 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 CPVLQ9H3G5 476 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 MROH8Q9H579 483 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 RAVER2Q9HCJ3 691 aaKnown RBP12.96□□□□□ -0.33
VCAN-205ENST00000503923 PNMA2Q9UL42 364 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 BRPF3Q9ULD4 1205 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 ZSWIM8A7E2V4 1837 aa12.96□□□□□ -0.33
VCAN-205ENST00000503923 RXRAP19793 462 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 SMARCA1P28370 1054 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 PRMT2P55345 433 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 SNAP25P60880 206 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 APOBRQ0VD83 1088 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 TOB2Q14106 344 aaPredicted RBP12.95□□□□□ -0.34
VCAN-205ENST00000503923 PKN2Q16513 984 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms