RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 MYH8P13535 1937 aa25.54■■□□□ 1.68
PCDH1-204ENST00000503492 CFAP100Q494V2 611 aa25.54■■□□□ 1.68
PCDH1-204ENST00000503492 PODNQ7Z5L7 613 aa25.54■■□□□ 1.68
PCDH1-204ENST00000503492 CLEC10AQ8IUN9 316 aa25.54■■□□□ 1.68
PCDH1-204ENST00000503492 IQUBQ8NA54 791 aa25.54■■□□□ 1.68
PCDH1-204ENST00000503492 STAMQ92783 540 aa25.54■■□□□ 1.68
PCDH1-204ENST00000503492 PIGSQ96S52 555 aa25.54■■□□□ 1.68
PCDH1-204ENST00000503492 UBA5Q9GZZ9 404 aa25.54■■□□□ 1.68
PCDH1-204ENST00000503492 HSP90AA4PQ58FG1 418 aa25.54■■□□□ 1.68
PCDH1-204ENST00000503492 PDXDC2PQ6P474 469 aa25.54■■□□□ 1.68
PCDH1-204ENST00000503492 LRRC47Q8N1G4 583 aaKnown RBP25.54■■□□□ 1.68
PCDH1-204ENST00000503492 TMEM60Q9H2L4 133 aa25.54■■□□□ 1.68
PCDH1-204ENST00000503492 ZNF18P17022 549 aa25.53■■□□□ 1.68
PCDH1-204ENST00000503492 CCDC150Q8NCX0 1101 aa25.53■■□□□ 1.68
PCDH1-204ENST00000503492 C16orf45Q96MC5 204 aaPredicted RBP25.53■■□□□ 1.68
PCDH1-204ENST00000503492 GSDMAQ96QA5 445 aa25.53■■□□□ 1.68
PCDH1-204ENST00000503492 RIOX1Q9H6W3 641 aa25.53■■□□□ 1.68
PCDH1-204ENST00000503492 SWAP70Q9UH65 585 aa25.53■■□□□ 1.68
PCDH1-204ENST00000503492 FRMPD2Q68DX3 1309 aaPredicted RBP25.53■■□□□ 1.68
PCDH1-204ENST00000503492 SMCO2A6NFE2 343 aa25.53■■□□□ 1.68
PCDH1-204ENST00000503492 ERCC5P28715 1186 aaPredicted RBP25.53■■□□□ 1.68
PCDH1-204ENST00000503492 CRKP46108 304 aa25.53■■□□□ 1.68
PCDH1-204ENST00000503492 EIF6P56537 245 aaKnown RBP25.53■■□□□ 1.68
PCDH1-204ENST00000503492 NFIAQ12857 509 aa25.53■■□□□ 1.68
PCDH1-204ENST00000503492 CCDC12Q8WUD4 166 aaPredicted RBP25.53■■□□□ 1.68
PCDH1-204ENST00000503492 SEC63Q9UGP8 760 aaKnown RBP25.53■■□□□ 1.68
PCDH1-204ENST00000503492 CD44P16070 742 aaKnown RBP25.52■■□□□ 1.68
PCDH1-204ENST00000503492 CDC25AP30304 524 aa25.52■■□□□ 1.68
PCDH1-204ENST00000503492 SHMT1P34896 483 aa25.52■■□□□ 1.68
PCDH1-204ENST00000503492 MTRQ99707 1265 aa25.52■■□□□ 1.68
PCDH1-204ENST00000503492 INTS13Q9NVM9 706 aa25.52■■□□□ 1.68
PCDH1-204ENST00000503492 TNS1Q9HBL0 1735 aaKnown RBP25.52■■□□□ 1.68
PCDH1-204ENST00000503492 USP27XA6NNY8 438 aa25.52■■□□□ 1.68
PCDH1-204ENST00000503492 TMEM232C9JQI7 657 aa25.52■■□□□ 1.68
PCDH1-204ENST00000503492 TPD52L1Q16890 204 aaPredicted RBP25.52■■□□□ 1.68
PCDH1-204ENST00000503492 STYK1Q6J9G0 422 aa25.52■■□□□ 1.68
PCDH1-204ENST00000503492 PYM1Q9BRP8 204 aaKnown RBP25.52■■□□□ 1.68
PCDH1-204ENST00000503492 SLX4Q8IY92 1834 aa25.51■■□□□ 1.68
PCDH1-204ENST00000503492 H0YIN7 160 aa25.51■■□□□ 1.67
PCDH1-204ENST00000503492 VSTM4Q8IW00 320 aa25.51■■□□□ 1.67
PCDH1-204ENST00000503492 C6orf50Q9HD87 102 aa25.51■■□□□ 1.67
PCDH1-204ENST00000503492 SNHG28P0DPA3 235 aa25.51■■□□□ 1.67
PCDH1-204ENST00000503492 DTHD1Q6ZMT9 781 aa25.51■■□□□ 1.67
PCDH1-204ENST00000503492 BLZF1Q9H2G9 400 aa25.51■■□□□ 1.67
PCDH1-204ENST00000503492 ZNF219Q9P2Y4 722 aaPredicted RBP25.51■■□□□ 1.67
PCDH1-204ENST00000503492 PCDHAC2Q9Y5I4 1007 aa25.51■■□□□ 1.67
PCDH1-204ENST00000503492 MYO3BQ8WXR4 1341 aa25.5■■□□□ 1.67
PCDH1-204ENST00000503492 SFPQP23246 707 aaKnown RBP eCLIP25.5■■□□□ 1.67
PCDH1-204ENST00000503492 RXRBP28702 533 aa25.5■■□□□ 1.67
PCDH1-204ENST00000503492 CUL4BQ13620 913 aa25.5■■□□□ 1.67
PCDH1-204ENST00000503492 CT47A1Q5JQC4 288 aaPredicted RBP25.5■■□□□ 1.67
PCDH1-204ENST00000503492 KRT25Q7Z3Z0 450 aa25.5■■□□□ 1.67
PCDH1-204ENST00000503492 ZFPM1Q8IX07 1006 aa25.5■■□□□ 1.67
PCDH1-204ENST00000503492 SAMSN1Q9NSI8 373 aaKnown RBP25.5■■□□□ 1.67
PCDH1-204ENST00000503492 SLURP2P0DP57 97 aa25.49■■□□□ 1.67
PCDH1-204ENST00000503492 GNA11P29992 359 aa25.49■■□□□ 1.67
PCDH1-204ENST00000503492 ASPRV1Q53RT3 343 aa25.49■■□□□ 1.67
PCDH1-204ENST00000503492 KIAA0825Q8IV33 1275 aa25.49■■□□□ 1.67
PCDH1-204ENST00000503492 ZDHHC15Q96MV8 337 aa25.49■■□□□ 1.67
PCDH1-204ENST00000503492 SCN9AQ15858 1988 aa25.49■■□□□ 1.67
PCDH1-204ENST00000503492 TTLL1O95922 423 aa25.49■■□□□ 1.67
PCDH1-204ENST00000503492 CHRNA5P30532 468 aa25.49■■□□□ 1.67
PCDH1-204ENST00000503492 KARSQ15046 597 aaKnown RBP25.49■■□□□ 1.67
PCDH1-204ENST00000503492 PTPN21Q16825 1174 aa25.49■■□□□ 1.67
PCDH1-204ENST00000503492 SMYD4Q8IYR2 804 aaPredicted RBP25.49■■□□□ 1.67
PCDH1-204ENST00000503492 HLA-DOAP06340 250 aa25.48■■□□□ 1.67
PCDH1-204ENST00000503492 TNNT1P13805 278 aa25.48■■□□□ 1.67
PCDH1-204ENST00000503492 NONOQ15233 471 aaKnown RBP eCLIP25.48■■□□□ 1.67
PCDH1-204ENST00000503492 SOGA3Q5TF21 947 aa25.48■■□□□ 1.67
PCDH1-204ENST00000503492 STRIP1Q5VSL9 837 aa25.48■■□□□ 1.67
PCDH1-204ENST00000503492 PPP1R3GB7ZBB8 358 aa25.48■■□□□ 1.67
PCDH1-204ENST00000503492 DYNC1I1O14576 645 aa25.48■■□□□ 1.67
PCDH1-204ENST00000503492 GTPBP6O43824 516 aaPredicted RBP25.48■■□□□ 1.67
PCDH1-204ENST00000503492 ECE2O60344 883 aa25.48■■□□□ 1.67
PCDH1-204ENST00000503492 CDK11BP21127 795 aaKnown RBP25.48■■□□□ 1.67
PCDH1-204ENST00000503492 TXLNAP40222 546 aa25.48■■□□□ 1.67
PCDH1-204ENST00000503492 DHX8Q14562 1220 aaKnown RBP25.48■■□□□ 1.67
PCDH1-204ENST00000503492 DACT2Q5SW24 774 aa25.48■■□□□ 1.67
PCDH1-204ENST00000503492 PP2D1A8MPX8 630 aa25.47■■□□□ 1.67
PCDH1-204ENST00000503492 KLHL10Q6JEL2 608 aa25.47■■□□□ 1.67
PCDH1-204ENST00000503492 GPCPD1Q9NPB8 672 aa25.47■■□□□ 1.67
PCDH1-204ENST00000503492 KCND1Q9NSA2 647 aa25.47■■□□□ 1.67
PCDH1-204ENST00000503492 ESYT2A0FGR8 921 aa25.47■■□□□ 1.67
PCDH1-204ENST00000503492 LAD1O00515 517 aa25.47■■□□□ 1.67
PCDH1-204ENST00000503492 CACNB3P54284 484 aa25.47■■□□□ 1.67
PCDH1-204ENST00000503492 CCAR2Q8N163 923 aaKnown RBP25.47■■□□□ 1.67
PCDH1-204ENST00000503492 DISC1Q9NRI5 854 aa25.47■■□□□ 1.67
PCDH1-204ENST00000503492 PRPHP41219 470 aa25.46■■□□□ 1.67
PCDH1-204ENST00000503492 STX17P56962 302 aa25.46■■□□□ 1.67
PCDH1-204ENST00000503492 FKBP1AP62942 108 aaKnown RBP25.46■■□□□ 1.67
PCDH1-204ENST00000503492 LETM2Q2VYF4 491 aa25.46■■□□□ 1.67
PCDH1-204ENST00000503492 C10orf71Q711Q0 1435 aa25.46■■□□□ 1.67
PCDH1-204ENST00000503492 MRIQ9BWK5 157 aa25.46■■□□□ 1.67
PCDH1-204ENST00000503492 GREB1LQ9C091 1923 aaPredicted RBP25.46■■□□□ 1.67
PCDH1-204ENST00000503492 ZNF646O15015 1829 aaPredicted RBP25.46■■□□□ 1.67
PCDH1-204ENST00000503492 STAT6P42226 847 aa25.46■■□□□ 1.67
PCDH1-204ENST00000503492 SPATA1Q5VX52 437 aa25.46■■□□□ 1.67
PCDH1-204ENST00000503492 EHD4Q9H223 541 aa25.46■■□□□ 1.67
PCDH1-204ENST00000503492 DNAJC18Q9H819 358 aa25.46■■□□□ 1.67
PCDH1-204ENST00000503492 BIN2Q9UBW5 565 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms