RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 MTA3Q9BTC8 594 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 UPF3BQ9BZI7 483 aaKnown RBP19.29■□□□□ 0.68
SCLT1-205ENST00000503401 PORCNQ9H237 461 aa19.29■□□□□ 0.68
SCLT1-205ENST00000503401 BAZ2BQ9UIF8 2168 aaKnown RBP19.29■□□□□ 0.68
SCLT1-205ENST00000503401 SMCHD1A6NHR9 2005 aa19.28■□□□□ 0.68
SCLT1-205ENST00000503401 FMNL1O95466 1100 aaPredicted RBP19.28■□□□□ 0.68
SCLT1-205ENST00000503401 PARP1P09874 1014 aaKnown RBP19.28■□□□□ 0.68
SCLT1-205ENST00000503401 COL13A1Q5TAT6 717 aaPredicted RBP19.28■□□□□ 0.68
SCLT1-205ENST00000503401 CATIPQ7Z7H3 387 aa19.28■□□□□ 0.68
SCLT1-205ENST00000503401 FAM160B2Q86V87 743 aa19.28■□□□□ 0.68
SCLT1-205ENST00000503401 ZNF654Q8IZM8 581 aa19.28■□□□□ 0.68
SCLT1-205ENST00000503401 STAG2Q8N3U4 1231 aa19.28■□□□□ 0.68
SCLT1-205ENST00000503401 REPS2Q8NFH8 660 aa19.28■□□□□ 0.68
SCLT1-205ENST00000503401 UBA5Q9GZZ9 404 aa19.28■□□□□ 0.68
SCLT1-205ENST00000503401 EFCC1Q9HA90 598 aa19.28■□□□□ 0.68
SCLT1-205ENST00000503401 PRR12Q9ULL5 1215 aa19.28■□□□□ 0.68
SCLT1-205ENST00000503401 TRIM17Q9Y577 477 aa19.28■□□□□ 0.68
SCLT1-205ENST00000503401 WDR19Q8NEZ3 1342 aa19.28■□□□□ 0.68
SCLT1-205ENST00000503401 CCDC69A6NI79 296 aa19.27■□□□□ 0.68
SCLT1-205ENST00000503401 RXRAP19793 462 aa19.27■□□□□ 0.68
SCLT1-205ENST00000503401 LIFRP42702 1097 aa19.27■□□□□ 0.68
SCLT1-205ENST00000503401 FGD1P98174 961 aa19.27■□□□□ 0.68
SCLT1-205ENST00000503401 TROAPQ12815 778 aa19.27■□□□□ 0.68
SCLT1-205ENST00000503401 Q6ZUG5 572 aa19.27■□□□□ 0.68
SCLT1-205ENST00000503401 MB21D1Q8N884 522 aa19.27■□□□□ 0.68
SCLT1-205ENST00000503401 SPATC1LQ9H0A9 340 aa19.27■□□□□ 0.68
SCLT1-205ENST00000503401 ZSWIM6Q9HCJ5 1215 aa19.27■□□□□ 0.68
SCLT1-205ENST00000503401 PLA2G6O60733 806 aa19.26■□□□□ 0.67
SCLT1-205ENST00000503401 SLC4A3P48751 1232 aa19.26■□□□□ 0.67
SCLT1-205ENST00000503401 FCGRTP55899 365 aa19.26■□□□□ 0.67
SCLT1-205ENST00000503401 GPATCH4Q5T3I0 446 aaKnown RBP19.26■□□□□ 0.67
SCLT1-205ENST00000503401 SYDE2Q5VT97 1194 aa19.26■□□□□ 0.67
SCLT1-205ENST00000503401 RUFY3Q7L099 469 aa19.26■□□□□ 0.67
SCLT1-205ENST00000503401 OTOP1Q7RTM1 612 aa19.26■□□□□ 0.67
SCLT1-205ENST00000503401 CPXCR1Q8N123 301 aa19.26■□□□□ 0.67
SCLT1-205ENST00000503401 MOV10L1Q9BXT6 1211 aaKnown RBP19.26■□□□□ 0.67
SCLT1-205ENST00000503401 SLC38A10Q9HBR0 1119 aa19.26■□□□□ 0.67
SCLT1-205ENST00000503401 MAD2L2Q9UI95 211 aa19.26■□□□□ 0.67
SCLT1-205ENST00000503401 ZNF214Q9UL59 606 aaPredicted RBP19.26■□□□□ 0.67
SCLT1-205ENST00000503401 ZBED4O75132 1171 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 GRM4Q14833 912 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 ASPRV1Q53RT3 343 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 WDR78Q5VTH9 848 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 CCDC174Q6PII3 467 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 BTNL9Q6UXG8 535 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 CTU1Q7Z7A3 348 aaKnown RBP19.25■□□□□ 0.67
SCLT1-205ENST00000503401 CCAR1Q8IX12 1150 aaKnown RBP19.25■□□□□ 0.67
SCLT1-205ENST00000503401 CCDC144CPQ8IYA2 1237 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 TMTC2Q8N394 836 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 RAVER2Q9HCJ3 691 aaKnown RBP19.25■□□□□ 0.67
SCLT1-205ENST00000503401 BRPF3Q9ULD4 1205 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 CTDP1Q9Y5B0 961 aaPredicted RBP19.25■□□□□ 0.67
SCLT1-205ENST00000503401 SLC12A7Q9Y666 1083 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 CYP46A1Q9Y6A2 500 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 MYH6P13533 1939 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 TNPO2O14787 897 aaKnown RBP19.25■□□□□ 0.67
SCLT1-205ENST00000503401 TAL1P17542 331 aaPredicted RBP19.25■□□□□ 0.67
SCLT1-205ENST00000503401 ANAPC15P60006 121 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 CCNA1P78396 465 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 SGMS1Q86VZ5 419 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 TM6SF1Q9BZW5 370 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 BRCA2P51587 3418 aa19.25■□□□□ 0.67
SCLT1-205ENST00000503401 STAT3P40763 770 aa19.24■□□□□ 0.67
SCLT1-205ENST00000503401 APOBRQ0VD83 1088 aa19.24■□□□□ 0.67
SCLT1-205ENST00000503401 SNRNP48Q6IEG0 339 aaKnown RBP19.24■□□□□ 0.67
SCLT1-205ENST00000503401 MICU3Q86XE3 530 aa19.24■□□□□ 0.67
SCLT1-205ENST00000503401 NCAPG2Q86XI2 1143 aa19.24■□□□□ 0.67
SCLT1-205ENST00000503401 BRF1Q92994 677 aa19.24■□□□□ 0.67
SCLT1-205ENST00000503401 NAP1L2Q9ULW6 460 aaPredicted RBP19.24■□□□□ 0.67
SCLT1-205ENST00000503401 RIPK3Q9Y572 518 aa19.24■□□□□ 0.67
SCLT1-205ENST00000503401 PLXNB2O15031 1838 aa19.23■□□□□ 0.67
SCLT1-205ENST00000503401 KLF18A0A0U1RQI7 1052 aa19.23■□□□□ 0.67
SCLT1-205ENST00000503401 PALM3A6NDB9 673 aaPredicted RBP19.23■□□□□ 0.67
SCLT1-205ENST00000503401 KLRF2D3W0D1 207 aa19.23■□□□□ 0.67
SCLT1-205ENST00000503401 DDAH1O94760 285 aa19.23■□□□□ 0.67
SCLT1-205ENST00000503401 ERCC3P19447 782 aa19.23■□□□□ 0.67
SCLT1-205ENST00000503401 LARP6Q9BRS8 491 aaKnown RBP19.23■□□□□ 0.67
SCLT1-205ENST00000503401 VAT1LQ9HCJ6 419 aa19.23■□□□□ 0.67
SCLT1-205ENST00000503401 GABRQQ9UN88 632 aa19.23■□□□□ 0.67
SCLT1-205ENST00000503401 ZNF536O15090 1300 aa19.23■□□□□ 0.67
SCLT1-205ENST00000503401 DHX16O60231 1041 aaKnown RBP19.22■□□□□ 0.67
SCLT1-205ENST00000503401 MAPK4P31152 587 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 PRKCZQ05513 592 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 APOA5Q6Q788 366 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 GPR142Q7Z601 462 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 NBPF11Q86T75 865 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 ADGRF4Q8IZF3 695 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 AGBL1Q96MI9 1066 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 TEX13BQ9BXU2 312 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 C22orf23Q9BZE7 217 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 RANBP17Q9H2T7 1088 aaKnown RBP19.22■□□□□ 0.67
SCLT1-205ENST00000503401 CWC22Q9HCG8 908 aaKnown RBP19.22■□□□□ 0.67
SCLT1-205ENST00000503401 ZNFX1Q9P2E3 1918 aaKnown RBP19.22■□□□□ 0.67
SCLT1-205ENST00000503401 ARHGEF6Q15052 776 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 SLC35G1Q2M3R5 365 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 RIOX2Q8IUF8 465 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 CMTR1Q8N1G2 835 aaKnown RBP19.22■□□□□ 0.67
SCLT1-205ENST00000503401 CTCFLQ8NI51 663 aaPredicted RBP19.22■□□□□ 0.67
SCLT1-205ENST00000503401 COA7Q96BR5 231 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 HOMER2Q9NSB8 354 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms