RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 CHMP4CQ96CF2 233 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 MROH8Q9H579 483 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 CWC22Q9HCG8 908 aaKnown RBP21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 MGAMO43451 1857 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 PARP14Q460N5 1801 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 SLC15A5A6NIM6 579 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 REC8O95072 547 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 PTPREP23469 700 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 COPB2P35606 906 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 OAZ1P54368 228 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 ANTXR2P58335 489 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 ZNF543Q08ER8 600 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 GRB14Q14449 540 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 TSGA10IPQ3SY00 556 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 IFIT1BQ5T764 474 aaKnown RBP21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 SH3TC2Q8TF17 1288 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 ZNF333Q96JL9 665 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 MTA3Q9BTC8 594 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 TEX13BQ9BXU2 312 aa21.38■■□□□ 1.01
PDLIM7-209ENST00000503346 ADCY3O60266 1144 aa21.37■■□□□ 1.01
PDLIM7-209ENST00000503346 XRCC5P13010 732 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-209ENST00000503346 IKQ13123 557 aaPredicted RBP21.37■■□□□ 1.01
PDLIM7-209ENST00000503346 SART3Q15020 963 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-209ENST00000503346 WDR78Q5VTH9 848 aa21.37■■□□□ 1.01
PDLIM7-209ENST00000503346 NCAPG2Q86XI2 1143 aa21.37■■□□□ 1.01
PDLIM7-209ENST00000503346 PRR12Q9ULL5 1215 aa21.37■■□□□ 1.01
PDLIM7-209ENST00000503346 IVNS1ABPQ9Y6Y0 642 aa21.37■■□□□ 1.01
PDLIM7-209ENST00000503346 FRMPD2Q68DX3 1309 aaPredicted RBP21.36■■□□□ 1.01
PDLIM7-209ENST00000503346 IFIT3O14879 490 aaKnown RBP21.36■■□□□ 1.01
PDLIM7-209ENST00000503346 EPB41L2O43491 1005 aaKnown RBP21.36■■□□□ 1.01
PDLIM7-209ENST00000503346 STRNO43815 780 aa21.36■■□□□ 1.01
PDLIM7-209ENST00000503346 RGS2P41220 211 aa21.36■■□□□ 1.01
PDLIM7-209ENST00000503346 MAP2K5Q13163 448 aa21.36■■□□□ 1.01
PDLIM7-209ENST00000503346 GPATCH4Q5T3I0 446 aaKnown RBP21.36■■□□□ 1.01
PDLIM7-209ENST00000503346 TTBK2Q6IQ55 1244 aa21.36■■□□□ 1.01
PDLIM7-209ENST00000503346 ABRAQ8N0Z2 381 aa21.36■■□□□ 1.01
PDLIM7-209ENST00000503346 KCNB2Q92953 911 aa21.36■■□□□ 1.01
PDLIM7-209ENST00000503346 CTDP1Q9Y5B0 961 aaPredicted RBP21.36■■□□□ 1.01
PDLIM7-209ENST00000503346 ERICH2A1L162 156 aa21.35■■□□□ 1.01
PDLIM7-209ENST00000503346 CYP2B6P20813 491 aa21.35■■□□□ 1.01
PDLIM7-209ENST00000503346 SYDE2Q5VT97 1194 aa21.35■■□□□ 1.01
PDLIM7-209ENST00000503346 SNRNP48Q6IEG0 339 aaKnown RBP21.35■■□□□ 1.01
PDLIM7-209ENST00000503346 CHST3Q7LGC8 479 aa21.35■■□□□ 1.01
PDLIM7-209ENST00000503346 IGDCC4Q8TDY8 1250 aa21.35■■□□□ 1.01
PDLIM7-209ENST00000503346 GPCPD1Q9NPB8 672 aa21.35■■□□□ 1.01
PDLIM7-209ENST00000503346 CAPN15O75808 1086 aa21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 HOXC6P09630 235 aa21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 ELNP15502 786 aa21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 ZKSCAN1P17029 563 aaPredicted RBP21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 MCM5P33992 734 aa21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 HSPA4P34932 840 aa21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 SLC16A2P36021 539 aa21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 WTAPQ15007 396 aa21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 RASEFQ8IZ41 740 aa21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 CPXCR1Q8N123 301 aa21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 APBA2Q99767 749 aa21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 RANBP17Q9H2T7 1088 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 RAVER2Q9HCJ3 691 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-209ENST00000503346 ZNF536O15090 1300 aa21.33■■□□□ 1.01
PDLIM7-209ENST00000503346 PRC1O43663 620 aa21.33■■□□□ 1.01
PDLIM7-209ENST00000503346 COL9A3Q14050 684 aaPredicted RBP21.33■■□□□ 1.01
PDLIM7-209ENST00000503346 KRT32Q14532 448 aa21.33■■□□□ 1.01
PDLIM7-209ENST00000503346 ASPRV1Q53RT3 343 aa21.33■■□□□ 1.01
PDLIM7-209ENST00000503346 TMEM67Q5HYA8 995 aa21.33■■□□□ 1.01
PDLIM7-209ENST00000503346 TRMT44Q8IYL2 757 aaKnown RBP21.33■■□□□ 1.01
PDLIM7-209ENST00000503346 TMEM87BQ96K49 555 aa21.33■■□□□ 1.01
PDLIM7-209ENST00000503346 RIPK3Q9Y572 518 aa21.33■■□□□ 1.01
PDLIM7-209ENST00000503346 FCER1AP12319 257 aa21.32■■□□□ 1
PDLIM7-209ENST00000503346 ADORA2AP29274 412 aa21.32■■□□□ 1
PDLIM7-209ENST00000503346 UBXN2AP68543 259 aa21.32■■□□□ 1
PDLIM7-209ENST00000503346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.32■■□□□ 1
PDLIM7-209ENST00000503346 NEK1Q96PY6 1258 aa21.32■■□□□ 1
PDLIM7-209ENST00000503346 SENP2Q9HC62 589 aa21.32■■□□□ 1
PDLIM7-209ENST00000503346 BIN2Q9UBW5 565 aaPredicted RBP21.32■■□□□ 1
PDLIM7-209ENST00000503346 PLXNB2O15031 1838 aa21.32■■□□□ 1
PDLIM7-209ENST00000503346 HMGCRP04035 888 aa21.31■■□□□ 1
PDLIM7-209ENST00000503346 INHAP05111 366 aa21.31■■□□□ 1
PDLIM7-209ENST00000503346 PARP1P09874 1014 aaKnown RBP21.31■■□□□ 1
PDLIM7-209ENST00000503346 GOLGA8HP0CJ92 632 aa21.31■■□□□ 1
PDLIM7-209ENST00000503346 CHST13Q8NET6 341 aa21.31■■□□□ 1
PDLIM7-209ENST00000503346 TRIB2Q92519 343 aa21.31■■□□□ 1
PDLIM7-209ENST00000503346 MMP19Q99542 508 aa21.31■■□□□ 1
PDLIM7-209ENST00000503346 LY9Q9HBG7 655 aa21.31■■□□□ 1
PDLIM7-209ENST00000503346 DOCK3Q8IZD9 2030 aa21.3■■□□□ 1
PDLIM7-209ENST00000503346 SH2B2O14492 632 aaPredicted RBP21.3■■□□□ 1
PDLIM7-209ENST00000503346 SNAP25P60880 206 aa21.3■■□□□ 1
PDLIM7-209ENST00000503346 TROAPQ12815 778 aa21.3■■□□□ 1
PDLIM7-209ENST00000503346 KCTD2Q14681 263 aa21.3■■□□□ 1
PDLIM7-209ENST00000503346 TKFCQ3LXA3 575 aa21.3■■□□□ 1
PDLIM7-209ENST00000503346 ADCK5Q3MIX3 580 aa21.3■■□□□ 1
PDLIM7-209ENST00000503346 DPP9Q86TI2 863 aa21.3■■□□□ 1
PDLIM7-209ENST00000503346 TMTC2Q8N394 836 aa21.3■■□□□ 1
PDLIM7-209ENST00000503346 AGBL1Q96MI9 1066 aa21.3■■□□□ 1
PDLIM7-209ENST00000503346 FBXO40Q9UH90 709 aa21.3■■□□□ 1
PDLIM7-209ENST00000503346 WDR19Q8NEZ3 1342 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 ZNF236Q9UL36 1845 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 COBLO75128 1261 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 ICAM1P05362 532 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 LIFRP42702 1097 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 MTFR1Q15390 333 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms