RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CLIC6Q96NY7 704 aa25.18■■□□□ 1.62
PTPN13-205ENST00000502971 PIGSQ96S52 555 aa25.18■■□□□ 1.62
PTPN13-205ENST00000502971 SDF4Q9BRK5 362 aa25.18■■□□□ 1.62
PTPN13-205ENST00000502971 UBA5Q9GZZ9 404 aa25.18■■□□□ 1.62
PTPN13-205ENST00000502971 ZMYND12Q9H0C1 365 aa25.18■■□□□ 1.62
PTPN13-205ENST00000502971 GPR162Q16538 588 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 DCAF4Q8WV16 495 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.17■■□□□ 1.62
PTPN13-205ENST00000502971 VAT1LQ9HCJ6 419 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 CNTNAP1P78357 1384 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 UTRNP46939 3433 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 CAVIN2O95810 425 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 GNA11P29992 359 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 NAPAP54920 295 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 ICA1Q05084 483 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 SEPT2Q15019 361 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 HOMER1Q86YM7 354 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 C6orf50Q9HD87 102 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 GPCPD1Q9NPB8 672 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 MYOZ2Q9NPC6 264 aa25.17■■□□□ 1.62
PTPN13-205ENST00000502971 NOM1Q5C9Z4 860 aaKnown RBP25.16■■□□□ 1.62
PTPN13-205ENST00000502971 VEZTQ9HBM0 779 aa25.16■■□□□ 1.62
PTPN13-205ENST00000502971 FAM13BQ9NYF5 915 aa25.16■■□□□ 1.62
PTPN13-205ENST00000502971 PCDHA6Q9UN73 950 aa25.16■■□□□ 1.62
PTPN13-205ENST00000502971 PCDHA8Q9Y5H6 950 aa25.16■■□□□ 1.62
PTPN13-205ENST00000502971 ESYT2A0FGR8 921 aa25.15■■□□□ 1.62
PTPN13-205ENST00000502971 ZNF280AP59817 542 aaPredicted RBP25.15■■□□□ 1.62
PTPN13-205ENST00000502971 FAM200AQ8TCP9 573 aa25.15■■□□□ 1.62
PTPN13-205ENST00000502971 FERMT2Q96AC1 680 aa25.15■■□□□ 1.62
PTPN13-205ENST00000502971 SYNPO2Q9UMS6 1093 aa25.15■■□□□ 1.62
PTPN13-205ENST00000502971 CCDC194A0A1B0GVG4 234 aa25.15■■□□□ 1.62
PTPN13-205ENST00000502971 TBC1D12O60347 775 aa25.15■■□□□ 1.62
PTPN13-205ENST00000502971 GDF11O95390 407 aa25.15■■□□□ 1.62
PTPN13-205ENST00000502971 CCDC96Q2M329 555 aa25.15■■□□□ 1.62
PTPN13-205ENST00000502971 SIAH1Q8IUQ4 282 aa25.15■■□□□ 1.62
PTPN13-205ENST00000502971 KCNH3Q9ULD8 1083 aa25.15■■□□□ 1.62
PTPN13-205ENST00000502971 WNT10BO00744 389 aa25.14■■□□□ 1.61
PTPN13-205ENST00000502971 ADAMTS3O15072 1205 aa25.14■■□□□ 1.61
PTPN13-205ENST00000502971 ZNF174Q15697 407 aa25.14■■□□□ 1.61
PTPN13-205ENST00000502971 SLFN13Q68D06 897 aa25.14■■□□□ 1.61
PTPN13-205ENST00000502971 GMCL1P1Q8NEA9 526 aa25.14■■□□□ 1.61
PTPN13-205ENST00000502971 DICER1Q9UPY3 1922 aaKnown RBP25.13■■□□□ 1.61
PTPN13-205ENST00000502971 PNMA6FA0A0J9YX94 578 aa25.13■■□□□ 1.61
PTPN13-205ENST00000502971 SMCO2A6NFE2 343 aa25.13■■□□□ 1.61
PTPN13-205ENST00000502971 GH2P01242 217 aa25.13■■□□□ 1.61
PTPN13-205ENST00000502971 ATP2C1P98194 919 aaPredicted RBP25.13■■□□□ 1.61
PTPN13-205ENST00000502971 SHROOM1Q2M3G4 852 aaPredicted RBP25.13■■□□□ 1.61
PTPN13-205ENST00000502971 ANO6Q4KMQ2 910 aa25.13■■□□□ 1.61
PTPN13-205ENST00000502971 ADGRF4Q8IZF3 695 aa25.13■■□□□ 1.61
PTPN13-205ENST00000502971 JMJD4Q9H9V9 463 aa25.13■■□□□ 1.61
PTPN13-205ENST00000502971 SBF1O95248 1867 aa25.13■■□□□ 1.61
PTPN13-205ENST00000502971 STX1AQ16623 288 aa25.12■■□□□ 1.61
PTPN13-205ENST00000502971 PPP1R18Q6NYC8 613 aa25.12■■□□□ 1.61
PTPN13-205ENST00000502971 ELOA2Q8IYF1 753 aaPredicted RBP25.12■■□□□ 1.61
PTPN13-205ENST00000502971 WNT7AO00755 349 aa25.12■■□□□ 1.61
PTPN13-205ENST00000502971 SLC1A4P43007 532 aa25.12■■□□□ 1.61
PTPN13-205ENST00000502971 TNNI2P48788 182 aa25.12■■□□□ 1.61
PTPN13-205ENST00000502971 GRIN1Q05586 938 aa25.12■■□□□ 1.61
PTPN13-205ENST00000502971 KRT25Q7Z3Z0 450 aa25.12■■□□□ 1.61
PTPN13-205ENST00000502971 DPF2Q92785 391 aa25.12■■□□□ 1.61
PTPN13-205ENST00000502971 MTMR8Q96EF0 704 aa25.12■■□□□ 1.61
PTPN13-205ENST00000502971 PDLIM2Q96JY6 352 aa25.12■■□□□ 1.61
PTPN13-205ENST00000502971 KIAA1468Q9P260 1216 aa25.12■■□□□ 1.61
PTPN13-205ENST00000502971 PTGDRQ13258 359 aa25.11■■□□□ 1.61
PTPN13-205ENST00000502971 RRP1BQ14684 758 aaKnown RBP25.11■■□□□ 1.61
PTPN13-205ENST00000502971 NBPF9Q3BBW0 867 aa25.11■■□□□ 1.61
PTPN13-205ENST00000502971 TTBK2Q6IQ55 1244 aa25.11■■□□□ 1.61
PTPN13-205ENST00000502971 KCTD1Q719H9 257 aa25.11■■□□□ 1.61
PTPN13-205ENST00000502971 CSRNP2Q9H175 543 aa25.11■■□□□ 1.61
PTPN13-205ENST00000502971 RASGRP4Q8TDF6 673 aa25.1■■□□□ 1.61
PTPN13-205ENST00000502971 GMCL1Q96IK5 515 aa25.1■■□□□ 1.61
PTPN13-205ENST00000502971 ANO10Q9NW15 660 aa25.1■■□□□ 1.61
PTPN13-205ENST00000502971 JAG1P78504 1218 aa25.09■■□□□ 1.61
PTPN13-205ENST00000502971 TMEM39BQ9GZU3 492 aa25.09■■□□□ 1.61
PTPN13-205ENST00000502971 RNF181Q9P0P0 153 aa25.09■■□□□ 1.61
PTPN13-205ENST00000502971 PGAP2Q9UHJ9 254 aa25.09■■□□□ 1.61
PTPN13-205ENST00000502971 F5H6K3 240 aa25.09■■□□□ 1.61
PTPN13-205ENST00000502971 ZBTB5O15062 677 aa25.09■■□□□ 1.61
PTPN13-205ENST00000502971 KLRC3Q07444 240 aa25.09■■□□□ 1.61
PTPN13-205ENST00000502971 ARL6IP4Q66PJ3 421 aaKnown RBP25.09■■□□□ 1.61
PTPN13-205ENST00000502971 KRBA2Q6ZNG9 492 aa25.09■■□□□ 1.61
PTPN13-205ENST00000502971 MCM7P33993 719 aa25.08■■□□□ 1.61
PTPN13-205ENST00000502971 MAP3K10Q02779 954 aa25.08■■□□□ 1.61
PTPN13-205ENST00000502971 TNFAIP1Q13829 316 aa25.08■■□□□ 1.61
PTPN13-205ENST00000502971 SPECC1Q5M775 1068 aa25.08■■□□□ 1.61
PTPN13-205ENST00000502971 GPC2Q8N158 579 aa25.08■■□□□ 1.61
PTPN13-205ENST00000502971 ARHGEF10LQ9HCE6 1279 aa25.08■■□□□ 1.61
PTPN13-205ENST00000502971 HOOK1Q9UJC3 728 aaKnown RBP25.08■■□□□ 1.61
PTPN13-205ENST00000502971 SHTN1A0MZ66 631 aa25.07■■□□□ 1.6
PTPN13-205ENST00000502971 USP17L10C9JJH3 530 aa25.07■■□□□ 1.6
PTPN13-205ENST00000502971 SLC16A2P36021 539 aa25.07■■□□□ 1.6
PTPN13-205ENST00000502971 ZNF165P49910 485 aa25.07■■□□□ 1.6
PTPN13-205ENST00000502971 GMPSP49915 693 aaPredicted RBP25.07■■□□□ 1.6
PTPN13-205ENST00000502971 NONOQ15233 471 aaKnown RBP eCLIP25.07■■□□□ 1.6
PTPN13-205ENST00000502971 CNNM3Q8NE01 707 aa25.07■■□□□ 1.6
PTPN13-205ENST00000502971 DNAJC25Q9H1X3 360 aa25.07■■□□□ 1.6
PTPN13-205ENST00000502971 CBX8Q9HC52 389 aa25.07■■□□□ 1.6
PTPN13-205ENST00000502971 ZC3H4Q9UPT8 1303 aaKnown RBP25.07■■□□□ 1.6
PTPN13-205ENST00000502971 RAD21O60216 631 aa25.06■■□□□ 1.6
PTPN13-205ENST00000502971 NDUFB10O96000 172 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 257.5 ms