RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 CHMP4CQ96CF2 233 aa20.32■□□□□ 0.84
UBE2D3-213ENST00000502690 FGD4Q96M96 766 aa20.32■□□□□ 0.84
UBE2D3-213ENST00000502690 FSD1Q9BTV5 496 aa20.32■□□□□ 0.84
UBE2D3-213ENST00000502690 TEX13BQ9BXU2 312 aa20.32■□□□□ 0.84
UBE2D3-213ENST00000502690 TACC3Q9Y6A5 838 aa20.32■□□□□ 0.84
UBE2D3-213ENST00000502690 MX1P20591 662 aa20.31■□□□□ 0.84
UBE2D3-213ENST00000502690 SLC4A3P48751 1232 aa20.31■□□□□ 0.84
UBE2D3-213ENST00000502690 RRP1P56182 461 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-213ENST00000502690 CPXCR1Q8N123 301 aa20.31■□□□□ 0.84
UBE2D3-213ENST00000502690 MKL1Q969V6 931 aa20.31■□□□□ 0.84
UBE2D3-213ENST00000502690 KIFC2Q96AC6 838 aa20.31■□□□□ 0.84
UBE2D3-213ENST00000502690 RAVER2Q9HCJ3 691 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-213ENST00000502690 XPNPEP3Q9NQH7 507 aa20.31■□□□□ 0.84
UBE2D3-213ENST00000502690 INCENPQ9NQS7 918 aa20.31■□□□□ 0.84
UBE2D3-213ENST00000502690 PDLIM7Q9NR12 457 aa20.31■□□□□ 0.84
UBE2D3-213ENST00000502690 DIS3Q9Y2L1 958 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-213ENST00000502690 DNAJC25-GNG10A0A024R161 153 aa20.3■□□□□ 0.84
UBE2D3-213ENST00000502690 SNAI1O95863 264 aaPredicted RBP20.3■□□□□ 0.84
UBE2D3-213ENST00000502690 IRX5P78411 483 aaPredicted RBP20.3■□□□□ 0.84
UBE2D3-213ENST00000502690 PPARAQ07869 468 aa20.3■□□□□ 0.84
UBE2D3-213ENST00000502690 GPR153Q6NV75 609 aa20.3■□□□□ 0.84
UBE2D3-213ENST00000502690 ZNF444Q8N0Y2 327 aaPredicted RBP20.3■□□□□ 0.84
UBE2D3-213ENST00000502690 PRPF38AQ8NAV1 312 aaKnown RBP20.3■□□□□ 0.84
UBE2D3-213ENST00000502690 CRBNQ96SW2 442 aa20.3■□□□□ 0.84
UBE2D3-213ENST00000502690 PRDM5Q9NQX1 630 aaPredicted RBP20.3■□□□□ 0.84
UBE2D3-213ENST00000502690 MTMR10Q9NXD2 777 aa20.3■□□□□ 0.84
UBE2D3-213ENST00000502690 PHF24Q9UPV7 400 aa20.3■□□□□ 0.84
UBE2D3-213ENST00000502690 TRIM43BA6NCK2 446 aa20.29■□□□□ 0.84
UBE2D3-213ENST00000502690 ERC2O15083 957 aa20.29■□□□□ 0.84
UBE2D3-213ENST00000502690 ADCY6O43306 1168 aa20.29■□□□□ 0.84
UBE2D3-213ENST00000502690 RARBP10826 455 aa20.29■□□□□ 0.84
UBE2D3-213ENST00000502690 GMCL1P1Q8NEA9 526 aa20.29■□□□□ 0.84
UBE2D3-213ENST00000502690 NEDD1Q8NHV4 660 aa20.29■□□□□ 0.84
UBE2D3-213ENST00000502690 TRIM43Q96BQ3 446 aaPredicted RBP20.29■□□□□ 0.84
UBE2D3-213ENST00000502690 SLC38A10Q9HBR0 1119 aa20.29■□□□□ 0.84
UBE2D3-213ENST00000502690 NRBP1Q9UHY1 535 aa20.29■□□□□ 0.84
UBE2D3-213ENST00000502690 ATP2A1O14983 1001 aa20.28■□□□□ 0.84
UBE2D3-213ENST00000502690 ADAMTS4O75173 837 aa20.28■□□□□ 0.84
UBE2D3-213ENST00000502690 TTLL1O95922 423 aa20.28■□□□□ 0.84
UBE2D3-213ENST00000502690 ITGB8P26012 769 aa20.28■□□□□ 0.84
UBE2D3-213ENST00000502690 COPB2P35606 906 aa20.28■□□□□ 0.84
UBE2D3-213ENST00000502690 CTDSPL2Q05D32 466 aa20.28■□□□□ 0.84
UBE2D3-213ENST00000502690 C9orf50Q5SZB4 431 aa20.28■□□□□ 0.84
UBE2D3-213ENST00000502690 VPS53Q5VIR6 699 aa20.28■□□□□ 0.84
UBE2D3-213ENST00000502690 SLFN13Q68D06 897 aa20.28■□□□□ 0.84
UBE2D3-213ENST00000502690 LBHD1Q9BQE6 289 aaPredicted RBP20.28■□□□□ 0.84
UBE2D3-213ENST00000502690 NAPBQ9H115 298 aa20.28■□□□□ 0.84
UBE2D3-213ENST00000502690 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.28■□□□□ 0.841e-8■□□□□ 9.1
UBE2D3-213ENST00000502690 SYNRGQ9UMZ2 1314 aa20.27■□□□□ 0.84
UBE2D3-213ENST00000502690 A0A1W2PQ45 241 aaPredicted RBP20.27■□□□□ 0.84
UBE2D3-213ENST00000502690 A0A1W2PQY0 241 aa20.27■□□□□ 0.84
UBE2D3-213ENST00000502690 MYADML2A6NDP7 307 aa20.27■□□□□ 0.84
UBE2D3-213ENST00000502690 NMT2O60551 498 aa20.27■□□□□ 0.84
UBE2D3-213ENST00000502690 TSPY3P0CV98 308 aa20.27■□□□□ 0.84
UBE2D3-213ENST00000502690 TSPY8P0CW00 308 aa20.27■□□□□ 0.84
UBE2D3-213ENST00000502690 TFAP4Q01664 338 aa20.27■□□□□ 0.84
UBE2D3-213ENST00000502690 TLE2Q04725 743 aa20.27■□□□□ 0.84
UBE2D3-213ENST00000502690 BADQ92934 168 aa20.27■□□□□ 0.84
UBE2D3-213ENST00000502690 BMP3P12645 472 aa20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 AKR1A1P14550 325 aa20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 SHHQ15465 462 aa20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 C1orf53Q5VUE5 145 aa20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 MAMDC4Q6UXC1 1216 aa20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 NACAP1Q9BZK3 213 aa20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 IL17RBQ9NRM6 502 aa20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 PRKAG2Q9UGJ0 569 aa20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 FEM1BQ9UK73 627 aa20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 ZHX1Q9UKY1 873 aaPredicted RBP20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 ZNF536O15090 1300 aa20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 SYNGAP1Q96PV0 1343 aa20.26■□□□□ 0.83
UBE2D3-213ENST00000502690 ZBED4O75132 1171 aa20.25■□□□□ 0.83
UBE2D3-213ENST00000502690 PDE4BQ07343 736 aa20.25■□□□□ 0.83
UBE2D3-213ENST00000502690 DDX11Q96FC9 970 aa20.25■□□□□ 0.83
UBE2D3-213ENST00000502690 ZNF287Q9HBT7 754 aa20.25■□□□□ 0.83
UBE2D3-213ENST00000502690 HOMER2Q9NSB8 354 aa20.25■□□□□ 0.83
UBE2D3-213ENST00000502690 SYNPO2Q9UMS6 1093 aa20.25■□□□□ 0.83
UBE2D3-213ENST00000502690 CNPY2Q9Y2B0 182 aa20.25■□□□□ 0.83
UBE2D3-213ENST00000502690 DDX49Q9Y6V7 483 aaKnown RBP20.25■□□□□ 0.83
UBE2D3-213ENST00000502690 TMEM232C9JQI7 657 aa20.24■□□□□ 0.83
UBE2D3-213ENST00000502690 SNAP25P60880 206 aa20.24■□□□□ 0.83
UBE2D3-213ENST00000502690 LRRFIP1Q32MZ4 808 aaKnown RBP20.24■□□□□ 0.83
UBE2D3-213ENST00000502690 ANKRD45Q5TZF3 282 aa20.24■□□□□ 0.83
UBE2D3-213ENST00000502690 RNF180Q86T96 592 aa20.24■□□□□ 0.83
UBE2D3-213ENST00000502690 SLC17A8Q8NDX2 589 aa20.24■□□□□ 0.83
UBE2D3-213ENST00000502690 AGBL1Q96MI9 1066 aa20.24■□□□□ 0.83
UBE2D3-213ENST00000502690 GUCD1Q96NT3 240 aa20.24■□□□□ 0.83
UBE2D3-213ENST00000502690 POTEB2H3BUK9 544 aa20.23■□□□□ 0.83
UBE2D3-213ENST00000502690 MCCP23508 829 aa20.23■□□□□ 0.83
UBE2D3-213ENST00000502690 EPHB4P54760 987 aa20.23■□□□□ 0.83
UBE2D3-213ENST00000502690 CNTN2Q02246 1040 aa20.23■□□□□ 0.83
UBE2D3-213ENST00000502690 CCSAPQ6IQ19 270 aaPredicted RBP20.23■□□□□ 0.83
UBE2D3-213ENST00000502690 MSL3Q8N5Y2 521 aaKnown RBP20.23■□□□□ 0.83
UBE2D3-213ENST00000502690 KLHDC9Q8NEP7 349 aa20.23■□□□□ 0.83
UBE2D3-213ENST00000502690 FAM227BQ96M60 508 aa20.23■□□□□ 0.83
UBE2D3-213ENST00000502690 FAM161BQ96MY7 647 aa20.23■□□□□ 0.83
UBE2D3-213ENST00000502690 KATNBL1Q9H079 304 aa20.23■□□□□ 0.83
UBE2D3-213ENST00000502690 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.23■□□□□ 0.83
UBE2D3-213ENST00000502690 ISY1Q9ULR0 285 aaKnown RBP20.23■□□□□ 0.83
UBE2D3-213ENST00000502690 ASTN1O14525 1302 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms