RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.15□□□□□ -1.1
MED28-202ENST00000499786 A0A0G2JLW4 131 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 PTPDC1A2A3K4 754 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 GOLGA8AA7E2F4 631 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 SPINT1O43278 529 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 F13A1P00488 732 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 GNRH1P01148 92 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 SYT1P21579 422 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 BTDP43251 543 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 GTF2IP78347 998 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 PTK7Q13308 1070 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 PKP1Q13835 747 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 WTAPQ15007 396 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 CCDC93Q567U6 631 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 Q6ZNB5 142 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 TRIM50Q86XT4 487 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 TEX11Q8IYF3 940 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 LINC00528Q8N1L1 170 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 TMTC2Q8N394 836 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 OGFOD1Q8N543 542 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 PBXIP1Q96AQ6 731 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 TSEN34Q9BSV6 310 aaKnown RBP8.15□□□□□ -1.1
MED28-202ENST00000499786 ATP13A2Q9NQ11 1180 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 MCM9Q9NXL9 1143 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 SLC12A7Q9Y666 1083 aa8.15□□□□□ -1.1
MED28-202ENST00000499786 CCDC196A0A1B0GTZ2 297 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 TMEM229AB2RXF0 380 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 ZBTB43O43298 467 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 RANBP6O60518 1105 aaKnown RBP8.14□□□□□ -1.11
MED28-202ENST00000499786 MBD3O95983 291 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 POLR3DP05423 398 aaPredicted RBP8.14□□□□□ -1.11
MED28-202ENST00000499786 BMP1P13497 986 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 PDIA3P30101 505 aaKnown RBP8.14□□□□□ -1.11
MED28-202ENST00000499786 CHRNA5P30532 468 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 LIFRP42702 1097 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 RCAN1P53805 252 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 ANTXR2P58335 489 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 CCT2P78371 535 aaKnown RBP8.14□□□□□ -1.11
MED28-202ENST00000499786 SCRN1Q12765 414 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 CRTC2Q53ET0 693 aaPredicted RBP8.14□□□□□ -1.11
MED28-202ENST00000499786 CCDC178Q5BJE1 867 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 PODNQ7Z5L7 613 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 MICU3Q86XE3 530 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 RTKN2Q8IZC4 609 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 SIX5Q8N196 739 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 LARGE2Q8N3Y3 721 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 TTLL6Q8N841 843 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 DCP1AQ9NPI6 582 aaPredicted RBP8.14□□□□□ -1.11
MED28-202ENST00000499786 DDX49Q9Y6V7 483 aaKnown RBP8.14□□□□□ -1.11
MED28-202ENST00000499786 SLX4Q8IY92 1834 aa8.14□□□□□ -1.11
MED28-202ENST00000499786 ROBO3Q96MS0 1386 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 KIF13BQ9NQT8 1826 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 GAKO14976 1311 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 TNKSO95271 1327 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 A0A1W2PRU2 124 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 TSPY2A6NKD2 308 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 FAM196BA6NMK8 535 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 USP17L12C9JPN9 530 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 USP17L21D6R901 530 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 PPIP5K2O43314 1243 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 ECE2O60344 883 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 STAU1O95793 577 aaKnown RBP8.13□□□□□ -1.11
MED28-202ENST00000499786 CALM1P0DP23 149 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 CALM2P0DP24 149 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 CALM3P0DP25 149 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 EVCP57679 992 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 KRT85P78386 507 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 ST3GAL1Q11201 340 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 TRIM29Q14134 588 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 SBK1Q52WX2 424 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 IFIT1BQ5T764 474 aaKnown RBP8.13□□□□□ -1.11
MED28-202ENST00000499786 CTR9Q6PD62 1173 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 APOA5Q6Q788 366 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 CYB5R4Q7L1T6 521 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 CATIPQ7Z7H3 387 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 SGMS1Q86VZ5 419 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 TRIM22Q8IYM9 498 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 STK11IPQ8N1F8 1099 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 NSUN7Q8NE18 718 aaKnown RBP8.13□□□□□ -1.11
MED28-202ENST00000499786 SMARCC2Q8TAQ2 1214 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 SH3RF3Q8TEJ3 882 aaPredicted RBP8.13□□□□□ -1.11
MED28-202ENST00000499786 WASF1Q92558 559 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 TEKT1Q969V4 418 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 SYAP1Q96A49 352 aaPredicted RBP8.13□□□□□ -1.11
MED28-202ENST00000499786 DDX11Q96FC9 970 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 RTFDC1Q9BY42 306 aaPredicted RBP8.13□□□□□ -1.11
MED28-202ENST00000499786 ETNK1Q9HBU6 452 aa8.13□□□□□ -1.11
MED28-202ENST00000499786 NCOA5Q9HCD5 579 aaKnown RBP8.13□□□□□ -1.11
MED28-202ENST00000499786 DNAAF2Q9NVR5 837 aaKnown RBP8.13□□□□□ -1.11
MED28-202ENST00000499786 TTF2Q9UNY4 1162 aaKnown RBP8.13□□□□□ -1.11
MED28-202ENST00000499786 DDX60LQ5H9U9 1706 aaKnown RBP8.12□□□□□ -1.11
MED28-202ENST00000499786 MYO3BQ8WXR4 1341 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 GPR75-ASB3A0A0A6YYF3 556 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 F8W031 263 aaPredicted RBP8.12□□□□□ -1.11
MED28-202ENST00000499786 ORC4O43929 436 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 JAK2O60674 1132 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 ATG7O95352 703 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 IL2RAP01589 272 aa8.12□□□□□ -1.11
MED28-202ENST00000499786 RASA1P20936 1047 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms