RNA–Protein interactions for RNA: ENST00000498660.1

TUBA4A-210, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-210ENST00000498660 GMCL1Q96IK5 515 aa10.16□□□□□ -0.78
TUBA4A-210ENST00000498660 AIFM3Q96NN9 605 aa10.16□□□□□ -0.78
TUBA4A-210ENST00000498660 ANP32EQ9BTT0 268 aa10.16□□□□□ -0.78
TUBA4A-210ENST00000498660 GOPCQ9HD26 462 aa10.16□□□□□ -0.78
TUBA4A-210ENST00000498660 RNF186Q9NXI6 227 aa10.16□□□□□ -0.78
TUBA4A-210ENST00000498660 CNPY2Q9Y2B0 182 aa10.16□□□□□ -0.78
TUBA4A-210ENST00000498660 V9GY48 417 aaPredicted RBP10.16□□□□□ -0.78
TUBA4A-210ENST00000498660 SSC5DA1L4H1 1573 aa10.16□□□□□ -0.78
TUBA4A-210ENST00000498660 TRPA1O75762 1119 aa10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 SLC10A3P09131 477 aa10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 KRT2P35908 639 aa10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 SLC1A4P43007 532 aa10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 RRP1BQ14684 758 aaKnown RBP10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 PKN1Q16512 942 aa10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 SLFN13Q68D06 897 aa10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 OTUD7BQ6GQQ9 843 aa10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 SULF1Q8IWU6 871 aa10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 REM2Q8IYK8 340 aaPredicted RBP10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 CCDC12Q8WUD4 166 aaPredicted RBP10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 SCAND2PQ9GZW5 306 aaPredicted RBP10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 SH3GLB2Q9NR46 395 aa10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 VPS54Q9P1Q0 977 aa10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 CFAP45Q9UL16 551 aa10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 SCAF8Q9UPN6 1271 aaKnown RBP10.15□□□□□ -0.78
TUBA4A-210ENST00000498660 ELP1O95163 1332 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 hCG_1642624A0A1W2PR95 340 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 PHF20L1A8MW92 1017 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 KIF28PB7ZC32 967 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 UBE2Q2LH0YL09 131 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 CTNND1O60716 968 aaKnown RBP10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 MBD3O95983 291 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 NDUFB10O96000 172 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 CALML3P27482 149 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 JAG1P78504 1218 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 SUPT20HL1Q3ZLR7 823 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 NBPF12Q5TAG4 269 aaPredicted RBP10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 PPP1R18Q6NYC8 613 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 HEATR3Q7Z4Q2 680 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 DIS3L2Q8IYB7 885 aaKnown RBP10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 PIBF1Q8WXW3 757 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 CDCA5Q96FF9 252 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 CHAMP1Q96JM3 812 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 SPATA32Q96LK8 384 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 FEZ1Q99689 392 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 PHF20Q9BVI0 1012 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 FOXP1Q9H334 677 aaPredicted RBP10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 GPCPD1Q9NPB8 672 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 GJB4Q9NTQ9 266 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 PCDH10Q9P2E7 1040 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 KCNJ14Q9UNX9 436 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 TMX2Q9Y320 296 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 PHIPQ8WWQ0 1821 aa10.14□□□□□ -0.79
TUBA4A-210ENST00000498660 F5H6K3 240 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 CYTH3O43739 400 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 TRAK2O60296 914 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 PRPF40AO75400 957 aaKnown RBP10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 U2AF2P26368 475 aaKnown RBP eCLIP10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 NLRP5P59047 1200 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 FKBP1BP68106 108 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 KLRC3Q07444 240 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 MYSM1Q5VVJ2 828 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 WWC2Q6AWC2 1192 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 GALNT17Q6IS24 598 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 FAM173BQ6P4H8 233 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 KCTD1Q719H9 257 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 CTU1Q7Z7A3 348 aaKnown RBP10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 HOMER1Q86YM7 354 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 SIAH1Q8IUQ4 282 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 NOSTRINQ8IVI9 506 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 SCYL3Q8IZE3 742 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 GPKOWQ92917 476 aaPredicted RBP eCLIP10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 WRNIP1Q96S55 665 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 RIOX1Q9H6W3 641 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 AS3MTQ9HBK9 375 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 PICK1Q9NRD5 415 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 LMBRD1Q9NUN5 540 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 BARHL2Q9NY43 387 aa10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 DDX49Q9Y6V7 483 aaKnown RBP10.13□□□□□ -0.79
TUBA4A-210ENST00000498660 RBBP6Q7Z6E9 1792 aaKnown RBP10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 STXBP3O00186 592 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 BMP3P12645 472 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 NF2P35240 595 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 NAPAP54920 295 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 UBE2HP62256 183 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 IKQ13123 557 aaPredicted RBP10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 SLC35G1Q2M3R5 365 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 KLHL40Q2TBA0 621 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 NOL9Q5SY16 702 aaKnown RBP10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 ADGRF4Q8IZF3 695 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 DAGLBQ8NCG7 672 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 LEO1Q8WVC0 666 aaPredicted RBP10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 PIGSQ96S52 555 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 CPVLQ9H3G5 476 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 VCPKMTQ9H867 229 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 ZNF112Q9UJU3 913 aa10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 NOL7Q9UMY1 257 aaKnown RBP10.12□□□□□ -0.79
TUBA4A-210ENST00000498660 BAZ2BQ9UIF8 2168 aaKnown RBP10.11□□□□□ -0.79
TUBA4A-210ENST00000498660 PNMA6FA0A0J9YX94 578 aa10.11□□□□□ -0.79
TUBA4A-210ENST00000498660 A0A1W2PRG0 241 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms