RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 MCCP23508 829 aa19.08■□□□□ 0.64
NR1H3-227ENST00000498548 CTDP1Q9Y5B0 961 aaPredicted RBP19.08■□□□□ 0.64
NR1H3-227ENST00000498548 ZNF236Q9UL36 1845 aa19.08■□□□□ 0.64
NR1H3-227ENST00000498548 PLXNA1Q9UIW2 1896 aa19.07■□□□□ 0.64
NR1H3-227ENST00000498548 TMEM232C9JQI7 657 aa19.07■□□□□ 0.64
NR1H3-227ENST00000498548 ZBED4O75132 1171 aa19.07■□□□□ 0.64
NR1H3-227ENST00000498548 IGHA2P01877 340 aa19.07■□□□□ 0.64
NR1H3-227ENST00000498548 FGRP09769 529 aa19.07■□□□□ 0.64
NR1H3-227ENST00000498548 CAPN2P17655 700 aa19.07■□□□□ 0.64
NR1H3-227ENST00000498548 ANO1Q5XXA6 986 aa19.07■□□□□ 0.64
NR1H3-227ENST00000498548 SNRNP48Q6IEG0 339 aaKnown RBP19.07■□□□□ 0.64
NR1H3-227ENST00000498548 KCTD1Q719H9 257 aa19.07■□□□□ 0.64
NR1H3-227ENST00000498548 ABRAQ8N0Z2 381 aa19.07■□□□□ 0.64
NR1H3-227ENST00000498548 ANKLE1Q8NAG6 615 aa19.07■□□□□ 0.64
NR1H3-227ENST00000498548 NBPF3Q9H094 633 aa19.07■□□□□ 0.64
NR1H3-227ENST00000498548 FRMPD3Q5JV73 1810 aa19.07■□□□□ 0.64
NR1H3-227ENST00000498548 GSPT1P15170 499 aaKnown RBP19.06■□□□□ 0.64
NR1H3-227ENST00000498548 SNAP25P60880 206 aa19.06■□□□□ 0.64
NR1H3-227ENST00000498548 OLFML2BQ68BL8 750 aa19.06■□□□□ 0.64
NR1H3-227ENST00000498548 TBC1D10CQ8IV04 446 aa19.06■□□□□ 0.64
NR1H3-227ENST00000498548 MAML3Q96JK9 1138 aa19.06■□□□□ 0.64
NR1H3-227ENST00000498548 C11orf49Q9H6J7 331 aa19.06■□□□□ 0.64
NR1H3-227ENST00000498548 SLC5A4Q9NY91 659 aa19.06■□□□□ 0.64
NR1H3-227ENST00000498548 SYNPO2Q9UMS6 1093 aa19.06■□□□□ 0.64
NR1H3-227ENST00000498548 EVI5O60447 810 aa19.05■□□□□ 0.64
NR1H3-227ENST00000498548 SLC1A4P43007 532 aa19.05■□□□□ 0.64
NR1H3-227ENST00000498548 MFAP1P55081 439 aaKnown RBP19.05■□□□□ 0.64
NR1H3-227ENST00000498548 IKQ13123 557 aaPredicted RBP19.05■□□□□ 0.64
NR1H3-227ENST00000498548 KCTD2Q14681 263 aa19.05■□□□□ 0.64
NR1H3-227ENST00000498548 TEX13BQ9BXU2 312 aa19.05■□□□□ 0.64
NR1H3-227ENST00000498548 SLC38A10Q9HBR0 1119 aa19.05■□□□□ 0.64
NR1H3-227ENST00000498548 DDX20Q9UHI6 824 aaKnown RBP19.05■□□□□ 0.64
NR1H3-227ENST00000498548 COLQQ9Y215 455 aaPredicted RBP19.05■□□□□ 0.64
NR1H3-227ENST00000498548 SMCHD1A6NHR9 2005 aa19.04■□□□□ 0.64
NR1H3-227ENST00000498548 CYBAP13498 195 aa19.04■□□□□ 0.64
NR1H3-227ENST00000498548 ZNF792Q3KQV3 632 aa19.04■□□□□ 0.64
NR1H3-227ENST00000498548 AKNAD1Q5T1N1 836 aa19.04■□□□□ 0.64
NR1H3-227ENST00000498548 TTC22Q5TAA0 569 aa19.04■□□□□ 0.64
NR1H3-227ENST00000498548 MFSD6Q6ZSS7 791 aa19.04■□□□□ 0.64
NR1H3-227ENST00000498548 STAG1Q8WVM7 1258 aa19.04■□□□□ 0.64
NR1H3-227ENST00000498548 GMCL1Q96IK5 515 aa19.04■□□□□ 0.64
NR1H3-227ENST00000498548 IL25Q9H293 177 aa19.04■□□□□ 0.64
NR1H3-227ENST00000498548 ZMYM6O95789 1325 aa19.03■□□□□ 0.64
NR1H3-227ENST00000498548 HIP1O00291 1037 aa19.03■□□□□ 0.64
NR1H3-227ENST00000498548 ZNF213O14771 459 aa19.03■□□□□ 0.64
NR1H3-227ENST00000498548 NOVP48745 357 aa19.03■□□□□ 0.64
NR1H3-227ENST00000498548 STAT2P52630 851 aa19.03■□□□□ 0.64
NR1H3-227ENST00000498548 HABP4Q5JVS0 413 aaKnown RBP19.03■□□□□ 0.64
NR1H3-227ENST00000498548 PPP4R3BQ5MIZ7 849 aa19.03■□□□□ 0.64
NR1H3-227ENST00000498548 RCSD1Q6JBY9 416 aa19.03■□□□□ 0.64
NR1H3-227ENST00000498548 TMEM47Q9BQJ4 181 aa19.03■□□□□ 0.64
NR1H3-227ENST00000498548 ZKSCAN3Q9BRR0 538 aa19.03■□□□□ 0.64
NR1H3-227ENST00000498548 NR2E3Q9Y5X4 410 aa19.03■□□□□ 0.64
NR1H3-227ENST00000498548 PFASO15067 1338 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 COPB2P35606 906 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 CCDC96Q2M329 555 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 TTBK2Q6IQ55 1244 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 CCDC174Q6PII3 467 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 CHRDL2Q6WN34 429 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 FAM160B2Q86V87 743 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 C7orf61Q8IZ16 206 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 CHURC1Q8WUH1 139 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 DDX11Q96FC9 970 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 AGBL1Q96MI9 1066 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 HOMER2Q9NSB8 354 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 PCDH10Q9P2E7 1040 aa19.02■□□□□ 0.64
NR1H3-227ENST00000498548 NEDD4P46934 1319 aa19.01■□□□□ 0.63
NR1H3-227ENST00000498548 FRMPD2Q68DX3 1309 aaPredicted RBP19.01■□□□□ 0.63
NR1H3-227ENST00000498548 ATP2A1O14983 1001 aa19.01■□□□□ 0.63
NR1H3-227ENST00000498548 MYCNP04198 464 aaPredicted RBP19.01■□□□□ 0.63
NR1H3-227ENST00000498548 TAL1P17542 331 aaPredicted RBP19.01■□□□□ 0.63
NR1H3-227ENST00000498548 TCP11L1Q9NUJ3 509 aa19.01■□□□□ 0.63
NR1H3-227ENST00000498548 PRR12Q9ULL5 1215 aa19.01■□□□□ 0.63
NR1H3-227ENST00000498548 TOP1P11387 765 aaKnown RBP19■□□□□ 0.63
NR1H3-227ENST00000498548 SLC16A2P36021 539 aa19■□□□□ 0.63
NR1H3-227ENST00000498548 GJC2Q5T442 439 aaPredicted RBP19■□□□□ 0.63
NR1H3-227ENST00000498548 TINF2Q9BSI4 451 aa19■□□□□ 0.63
NR1H3-227ENST00000498548 GPCPD1Q9NPB8 672 aa19■□□□□ 0.63
NR1H3-227ENST00000498548 ZMYND8Q9ULU4 1186 aaPredicted RBP19■□□□□ 0.63
NR1H3-227ENST00000498548 ZNF536O15090 1300 aa19■□□□□ 0.63
NR1H3-227ENST00000498548 SEPT4O43236 478 aa18.99■□□□□ 0.63
NR1H3-227ENST00000498548 MSCO60682 206 aa18.99■□□□□ 0.63
NR1H3-227ENST00000498548 COL6A1P12109 1028 aa18.99■□□□□ 0.63
NR1H3-227ENST00000498548 ANKRD35Q8N283 1001 aa18.99■□□□□ 0.63
NR1H3-227ENST00000498548 DCAF4Q8WV16 495 aa18.99■□□□□ 0.63
NR1H3-227ENST00000498548 DSCC1Q9BVC3 393 aa18.99■□□□□ 0.63
NR1H3-227ENST00000498548 SENP6Q9GZR1 1112 aaPredicted RBP18.99■□□□□ 0.63
NR1H3-227ENST00000498548 RNF41Q9H4P4 317 aaPredicted RBP18.99■□□□□ 0.63
NR1H3-227ENST00000498548 DIS3Q9Y2L1 958 aaKnown RBP18.99■□□□□ 0.63
NR1H3-227ENST00000498548 LAMA4Q16363 1823 aa18.99■□□□□ 0.63
NR1H3-227ENST00000498548 DNAJC25-GNG10A0A024R161 153 aa18.98■□□□□ 0.63
NR1H3-227ENST00000498548 B4E1Z4 1266 aa18.98■□□□□ 0.63
NR1H3-227ENST00000498548 PLA2G6O60733 806 aa18.98■□□□□ 0.63
NR1H3-227ENST00000498548 ALAS1P13196 640 aa18.98■□□□□ 0.63
NR1H3-227ENST00000498548 SYN1P17600 705 aa18.98■□□□□ 0.63
NR1H3-227ENST00000498548 OAZ1P54368 228 aa18.98■□□□□ 0.63
NR1H3-227ENST00000498548 LRRC26Q2I0M4 334 aa18.98■□□□□ 0.63
NR1H3-227ENST00000498548 CHST13Q8NET6 341 aa18.98■□□□□ 0.63
NR1H3-227ENST00000498548 ESR2Q92731 530 aa18.98■□□□□ 0.63
NR1H3-227ENST00000498548 MCM3APO60318 1980 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms