RNA–Protein interactions for RNA: ENST00000498532.5

HDAC11-220, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-220ENST00000498532 NEDD1Q8NHV4 660 aa20.66■□□□□ 0.9
HDAC11-220ENST00000498532 MKL1Q969V6 931 aa20.66■□□□□ 0.9
HDAC11-220ENST00000498532 PRKAG2Q9UGJ0 569 aa20.66■□□□□ 0.9
HDAC11-220ENST00000498532 ZBED4O75132 1171 aa20.65■□□□□ 0.9
HDAC11-220ENST00000498532 RARBP10826 455 aa20.65■□□□□ 0.9
HDAC11-220ENST00000498532 MDM2Q00987 491 aaPredicted RBP20.65■□□□□ 0.9
HDAC11-220ENST00000498532 CPXCR1Q8N123 301 aa20.65■□□□□ 0.9
HDAC11-220ENST00000498532 XPNPEP3Q9NQH7 507 aa20.65■□□□□ 0.9
HDAC11-220ENST00000498532 FEM1BQ9UK73 627 aa20.65■□□□□ 0.9
HDAC11-220ENST00000498532 ISY1Q9ULR0 285 aaKnown RBP20.65■□□□□ 0.9
HDAC11-220ENST00000498532 CNPY2Q9Y2B0 182 aa20.65■□□□□ 0.9
HDAC11-220ENST00000498532 ATP11BQ9Y2G3 1177 aa20.65■□□□□ 0.9
HDAC11-220ENST00000498532 ATP2A1O14983 1001 aa20.64■□□□□ 0.89
HDAC11-220ENST00000498532 SLC4A3P48751 1232 aa20.64■□□□□ 0.89
HDAC11-220ENST00000498532 TFAP4Q01664 338 aa20.64■□□□□ 0.89
HDAC11-220ENST00000498532 HDAC1Q13547 482 aaPredicted RBP20.64■□□□□ 0.89
HDAC11-220ENST00000498532 LRRC41Q15345 812 aa20.64■□□□□ 0.89
HDAC11-220ENST00000498532 LRIT3Q3SXY7 679 aa20.64■□□□□ 0.89
HDAC11-220ENST00000498532 CCDC129Q6ZRS4 1044 aa20.64■□□□□ 0.89
HDAC11-220ENST00000498532 EVI5LQ96CN4 794 aa20.64■□□□□ 0.89
HDAC11-220ENST00000498532 DDX11Q96FC9 970 aa20.64■□□□□ 0.89
HDAC11-220ENST00000498532 LBHD1Q9BQE6 289 aaPredicted RBP20.64■□□□□ 0.89
HDAC11-220ENST00000498532 RIPK3Q9Y572 518 aa20.64■□□□□ 0.89
HDAC11-220ENST00000498532 BMP3P12645 472 aa20.63■□□□□ 0.89
HDAC11-220ENST00000498532 SLFN13Q68D06 897 aa20.63■□□□□ 0.89
HDAC11-220ENST00000498532 SLC38A10Q9HBR0 1119 aa20.63■□□□□ 0.89
HDAC11-220ENST00000498532 LTBP2Q14767 1821 aa20.62■□□□□ 0.89
HDAC11-220ENST00000498532 FOXP2O15409 715 aa20.62■□□□□ 0.89
HDAC11-220ENST00000498532 AKR1A1P14550 325 aa20.62■□□□□ 0.89
HDAC11-220ENST00000498532 ADCYAP1R1P41586 468 aa20.62■□□□□ 0.89
HDAC11-220ENST00000498532 PPP4R3BQ5MIZ7 849 aa20.62■□□□□ 0.89
HDAC11-220ENST00000498532 SLC39A5Q6ZMH5 540 aa20.62■□□□□ 0.89
HDAC11-220ENST00000498532 MSL3Q8N5Y2 521 aaKnown RBP20.62■□□□□ 0.89
HDAC11-220ENST00000498532 RAVER2Q9HCJ3 691 aaKnown RBP20.62■□□□□ 0.89
HDAC11-220ENST00000498532 SMCHD1A6NHR9 2005 aa20.61■□□□□ 0.89
HDAC11-220ENST00000498532 SYNGAP1Q96PV0 1343 aa20.61■□□□□ 0.89
HDAC11-220ENST00000498532 TSPY2A6NKD2 308 aa20.61■□□□□ 0.89
HDAC11-220ENST00000498532 TAL1P17542 331 aaPredicted RBP20.61■□□□□ 0.89
HDAC11-220ENST00000498532 OAZ1P54368 228 aa20.61■□□□□ 0.89
HDAC11-220ENST00000498532 PDE1AP54750 535 aa20.61■□□□□ 0.89
HDAC11-220ENST00000498532 GPR153Q6NV75 609 aa20.61■□□□□ 0.89
HDAC11-220ENST00000498532 RNF180Q86T96 592 aa20.61■□□□□ 0.89
HDAC11-220ENST00000498532 FERMT2Q96AC1 680 aa20.61■□□□□ 0.89
HDAC11-220ENST00000498532 FBXO40Q9UH90 709 aa20.61■□□□□ 0.89
HDAC11-220ENST00000498532 STX8Q9UNK0 236 aa20.61■□□□□ 0.89
HDAC11-220ENST00000498532 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.61■□□□□ 0.89
HDAC11-220ENST00000498532 DNAJC25-GNG10A0A024R161 153 aa20.6■□□□□ 0.89
HDAC11-220ENST00000498532 TMEM232C9JQI7 657 aa20.6■□□□□ 0.89
HDAC11-220ENST00000498532 ZNF865P0CJ78 1059 aaPredicted RBP20.6■□□□□ 0.89
HDAC11-220ENST00000498532 STAT2P52630 851 aa20.6■□□□□ 0.89
HDAC11-220ENST00000498532 CTDSPL2Q05D32 466 aa20.6■□□□□ 0.89
HDAC11-220ENST00000498532 IKQ13123 557 aaPredicted RBP20.6■□□□□ 0.89
HDAC11-220ENST00000498532 SNX17Q15036 470 aa20.6■□□□□ 0.89
HDAC11-220ENST00000498532 TRIM60Q495X7 471 aa20.6■□□□□ 0.89
HDAC11-220ENST00000498532 VPS53Q5VIR6 699 aa20.6■□□□□ 0.89
HDAC11-220ENST00000498532 ANKRD35Q8N283 1001 aa20.6■□□□□ 0.89
HDAC11-220ENST00000498532 GMCL1Q96IK5 515 aa20.6■□□□□ 0.89
HDAC11-220ENST00000498532 PRDM5Q9NQX1 630 aaPredicted RBP20.6■□□□□ 0.89
HDAC11-220ENST00000498532 HELLSQ9NRZ9 838 aa20.6■□□□□ 0.89
HDAC11-220ENST00000498532 PGK1P00558 417 aa20.59■□□□□ 0.89
HDAC11-220ENST00000498532 FDX1P10109 184 aa20.59■□□□□ 0.89
HDAC11-220ENST00000498532 SLC1A4P43007 532 aa20.59■□□□□ 0.89
HDAC11-220ENST00000498532 CHST13Q8NET6 341 aa20.59■□□□□ 0.89
HDAC11-220ENST00000498532 LENG1Q96BZ8 264 aaPredicted RBP20.59■□□□□ 0.89
HDAC11-220ENST00000498532 YTHDC1Q96MU7 727 aaKnown RBP20.59■□□□□ 0.89
HDAC11-220ENST00000498532 HOMER2Q9NSB8 354 aa20.59■□□□□ 0.89
HDAC11-220ENST00000498532 PHF24Q9UPV7 400 aa20.59■□□□□ 0.89
HDAC11-220ENST00000498532 COL6A3P12111 3177 aa20.59■□□□□ 0.89
HDAC11-220ENST00000498532 LAMA2P24043 3122 aaKnown RBP20.58■□□□□ 0.89
HDAC11-220ENST00000498532 RANBP6O60518 1105 aaKnown RBP20.58■□□□□ 0.89
HDAC11-220ENST00000498532 MAMDC4Q6UXC1 1216 aa20.58■□□□□ 0.89
HDAC11-220ENST00000498532 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.58■□□□□ 0.89
HDAC11-220ENST00000498532 ZNF467Q7Z7K2 595 aaPredicted RBP20.58■□□□□ 0.89
HDAC11-220ENST00000498532 FAM160B2Q86V87 743 aa20.58■□□□□ 0.89
HDAC11-220ENST00000498532 CHMP4CQ96CF2 233 aa20.58■□□□□ 0.89
HDAC11-220ENST00000498532 ANAPC4Q9UJX5 808 aa20.58■□□□□ 0.89
HDAC11-220ENST00000498532 ZHX1Q9UKY1 873 aaPredicted RBP20.58■□□□□ 0.89
HDAC11-220ENST00000498532 NMT2O60551 498 aa20.57■□□□□ 0.88
HDAC11-220ENST00000498532 SNAI1O95863 264 aaPredicted RBP20.57■□□□□ 0.88
HDAC11-220ENST00000498532 MCCP23508 829 aa20.57■□□□□ 0.88
HDAC11-220ENST00000498532 AAMPQ13685 434 aa20.57■□□□□ 0.88
HDAC11-220ENST00000498532 C1orf53Q5VUE5 145 aa20.57■□□□□ 0.88
HDAC11-220ENST00000498532 DEFB123Q8N688 67 aa20.57■□□□□ 0.88
HDAC11-220ENST00000498532 CHURC1Q8WUH1 139 aa20.57■□□□□ 0.88
HDAC11-220ENST00000498532 FAM184BQ9ULE4 1060 aa20.57■□□□□ 0.88
HDAC11-220ENST00000498532 SYNRGQ9UMZ2 1314 aa20.56■□□□□ 0.88
HDAC11-220ENST00000498532 A0A0D9SFI3 127 aa20.56■□□□□ 0.88
HDAC11-220ENST00000498532 ADAMTS4O75173 837 aa20.56■□□□□ 0.88
HDAC11-220ENST00000498532 TICAM2Q86XR7 235 aa20.56■□□□□ 0.88
HDAC11-220ENST00000498532 STAG1Q8WVM7 1258 aa20.56■□□□□ 0.88
HDAC11-220ENST00000498532 FAM227BQ96M60 508 aa20.56■□□□□ 0.88
HDAC11-220ENST00000498532 LNPKQ9C0E8 428 aa20.56■□□□□ 0.88
HDAC11-220ENST00000498532 ACAD9Q9H845 621 aa20.56■□□□□ 0.88
HDAC11-220ENST00000498532 INCENPQ9NQS7 918 aa20.56■□□□□ 0.88
HDAC11-220ENST00000498532 PDLIM7Q9NR12 457 aa20.56■□□□□ 0.88
HDAC11-220ENST00000498532 IL17RBQ9NRM6 502 aa20.56■□□□□ 0.88
HDAC11-220ENST00000498532 MCM3APO60318 1980 aa20.55■□□□□ 0.88
HDAC11-220ENST00000498532 A0A1W2PQ45 241 aaPredicted RBP20.55■□□□□ 0.88
HDAC11-220ENST00000498532 A0A1W2PQY0 241 aa20.55■□□□□ 0.88
HDAC11-220ENST00000498532 ORC4O43929 436 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms