RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 TREML2Q5T2D2 321 aa20.4■□□□□ 0.86
CTDSP1-215ENST00000498160 SYDE2Q5VT97 1194 aa20.4■□□□□ 0.86
CTDSP1-215ENST00000498160 NOL8Q76FK4 1167 aaKnown RBP20.4■□□□□ 0.86
CTDSP1-215ENST00000498160 IFNL1Q8IU54 200 aa20.4■□□□□ 0.86
CTDSP1-215ENST00000498160 LLPHQ9BRT6 129 aaKnown RBP20.4■□□□□ 0.86
CTDSP1-215ENST00000498160 FRMPD2Q68DX3 1309 aaPredicted RBP20.39■□□□□ 0.85
CTDSP1-215ENST00000498160 IFNAR1P17181 557 aa20.39■□□□□ 0.85
CTDSP1-215ENST00000498160 DSG3P32926 999 aa20.39■□□□□ 0.85
CTDSP1-215ENST00000498160 GCLCP48506 637 aaPredicted RBP20.39■□□□□ 0.85
CTDSP1-215ENST00000498160 AKAP17AQ02040 695 aaKnown RBP20.39■□□□□ 0.85
CTDSP1-215ENST00000498160 TRIM22Q8IYM9 498 aa20.39■□□□□ 0.85
CTDSP1-215ENST00000498160 NUP88Q99567 741 aaPredicted RBP20.39■□□□□ 0.85
CTDSP1-215ENST00000498160 RIOX1Q9H6W3 641 aa20.39■□□□□ 0.85
CTDSP1-215ENST00000498160 GPCPD1Q9NPB8 672 aa20.39■□□□□ 0.85
CTDSP1-215ENST00000498160 ZBED4O75132 1171 aa20.38■□□□□ 0.85
CTDSP1-215ENST00000498160 RXRAP19793 462 aa20.38■□□□□ 0.85
CTDSP1-215ENST00000498160 OAZ1P54368 228 aa20.38■□□□□ 0.85
CTDSP1-215ENST00000498160 SCRN1Q12765 414 aa20.38■□□□□ 0.85
CTDSP1-215ENST00000498160 STK3Q13188 491 aa20.38■□□□□ 0.85
CTDSP1-215ENST00000498160 CCDC144CPQ8IYA2 1237 aa20.38■□□□□ 0.85
CTDSP1-215ENST00000498160 TMX3Q96JJ7 454 aa20.38■□□□□ 0.85
CTDSP1-215ENST00000498160 RNF26Q9BY78 433 aaPredicted RBP20.38■□□□□ 0.85
CTDSP1-215ENST00000498160 ASCC2Q9H1I8 757 aaPredicted RBP20.38■□□□□ 0.85
CTDSP1-215ENST00000498160 SEC63Q9UGP8 760 aaKnown RBP20.38■□□□□ 0.85
CTDSP1-215ENST00000498160 KIF3AQ9Y496 699 aa20.38■□□□□ 0.85
CTDSP1-215ENST00000498160 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.38■□□□□ 0.85
CTDSP1-215ENST00000498160 hCG_1984214I3L0E3 225 aa20.37■□□□□ 0.85
CTDSP1-215ENST00000498160 GOLGA8HP0CJ92 632 aa20.37■□□□□ 0.85
CTDSP1-215ENST00000498160 COPB2P35606 906 aa20.37■□□□□ 0.85
CTDSP1-215ENST00000498160 CCT2P78371 535 aaKnown RBP20.37■□□□□ 0.85
CTDSP1-215ENST00000498160 HMGN5P82970 282 aaKnown RBP20.37■□□□□ 0.85
CTDSP1-215ENST00000498160 STAG2Q8N3U4 1231 aa20.37■□□□□ 0.85
CTDSP1-215ENST00000498160 ZNF713Q8N859 430 aaPredicted RBP20.37■□□□□ 0.85
CTDSP1-215ENST00000498160 SMCR8Q8TEV9 937 aaPredicted RBP20.37■□□□□ 0.85
CTDSP1-215ENST00000498160 RRP36Q96EU6 259 aaKnown RBP20.37■□□□□ 0.85
CTDSP1-215ENST00000498160 ZFYVE28Q9HCC9 887 aa20.37■□□□□ 0.85
CTDSP1-215ENST00000498160 ADAMTS5Q9UNA0 930 aa20.37■□□□□ 0.85
CTDSP1-215ENST00000498160 STK36Q9NRP7 1315 aa20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 CDC27P30260 824 aa20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 HERVK_113P62684 666 aa20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 DGKZQ13574 1117 aa20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 TAF1CQ15572 869 aaPredicted RBP20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 FAM177A1Q8N128 213 aaPredicted RBP20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 FAM43AQ8N2R8 423 aa20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 WASF1Q92558 559 aa20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 KIFC2Q96AC6 838 aa20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 PTPN18Q99952 460 aa20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 LARP6Q9BRS8 491 aaKnown RBP20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 FAM217BQ9NTX9 383 aaPredicted RBP20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 PRR12Q9ULL5 1215 aa20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 PARP14Q460N5 1801 aa20.36■□□□□ 0.85
CTDSP1-215ENST00000498160 CNTNAP5Q8WYK1 1306 aa20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 SPDYE16A6NNV3 312 aaPredicted RBP20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 IGF2BP3O00425 579 aaKnown RBP eCLIP20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 ATP2A1O14983 1001 aa20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 CD2BP2O95400 341 aaKnown RBP20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 ADD1P35611 737 aaKnown RBP20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 MAP2K1Q02750 393 aaPredicted RBP20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 SSRP1Q08945 709 aaKnown RBP20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 RAB11FIP4Q86YS3 637 aa20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 ADGRF4Q8IZF3 695 aa20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 MTMR8Q96EF0 704 aa20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 INTS4Q96HW7 963 aaKnown RBP20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 CFHR5Q9BXR6 569 aa20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 RANBP17Q9H2T7 1088 aaKnown RBP20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 RABGAP1Q9Y3P9 1069 aa20.35■□□□□ 0.85
CTDSP1-215ENST00000498160 VWA5AO00534 786 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 ZBTB5O15062 677 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 PRPF3O43395 683 aaKnown RBP20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 CA12O43570 354 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 AOC2O75106 756 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 PLEKHA8P1O95397 391 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 LARGE1O95461 756 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 CUL4AQ13619 759 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 NTRK3Q16288 839 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 TTBK2Q6IQ55 1244 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 RASGRP2Q7LDG7 609 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 TEX2Q8IWB9 1127 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 CCDC83Q8IWF9 413 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 SRBD1Q8N5C6 995 aaKnown RBP20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 P2RX7Q99572 595 aaKnown RBP20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 UBA5Q9GZZ9 404 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 MAF1Q9H063 256 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 SLC38A10Q9HBR0 1119 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 NCOA5Q9HCD5 579 aaKnown RBP20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 SAGE1Q9NXZ1 904 aa20.34■□□□□ 0.85
CTDSP1-215ENST00000498160 A0A0G2JMZ2 1700 aa20.33■□□□□ 0.85
CTDSP1-215ENST00000498160 PNMA6FA0A0J9YX94 578 aa20.33■□□□□ 0.85
CTDSP1-215ENST00000498160 DEXIO95424 95 aa20.33■□□□□ 0.85
CTDSP1-215ENST00000498160 FMNL1O95466 1100 aaPredicted RBP20.33■□□□□ 0.85
CTDSP1-215ENST00000498160 SLC16A2P36021 539 aa20.33■□□□□ 0.85
CTDSP1-215ENST00000498160 CCNA1P78396 465 aa20.33■□□□□ 0.85
CTDSP1-215ENST00000498160 CDC37Q16543 378 aaPredicted RBP20.33■□□□□ 0.85
CTDSP1-215ENST00000498160 TKFCQ3LXA3 575 aa20.33■□□□□ 0.85
CTDSP1-215ENST00000498160 ATG4CQ96DT6 458 aa20.33■□□□□ 0.85
CTDSP1-215ENST00000498160 JMJD4Q9H9V9 463 aa20.33■□□□□ 0.85
CTDSP1-215ENST00000498160 FBXO28Q9NVF7 368 aa20.33■□□□□ 0.85
CTDSP1-215ENST00000498160 RLFQ13129 1914 aa20.33■□□□□ 0.84
CTDSP1-215ENST00000498160 HSP90AA1P07900 732 aaKnown RBP20.32■□□□□ 0.84
CTDSP1-215ENST00000498160 XBP1P17861 261 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms