RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 TATDN1Q6P1N9 297 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 FAM83AQ86UY5 434 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 FAM177A1Q8N128 213 aaPredicted RBP9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 ZNF713Q8N859 430 aaPredicted RBP9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 CCDC12Q8WUD4 166 aaPredicted RBP9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 FAM151AQ8WW52 585 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 CPVLQ9H3G5 476 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 GOLPH3LQ9H4A5 285 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 CLIP2Q9UDT6 1046 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 PCDHA7Q9UN72 937 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 CEP131Q9UPN4 1083 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 GJA3Q9Y6H8 435 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 LCTP09848 1927 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 SHTN1A0MZ66 631 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 WNT10BO00744 389 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 RAD21O60216 631 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 PPP6R2O75170 966 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 SNHG28P0DPA3 235 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 MARCKSP29966 332 aaPredicted RBP9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 GMPSP49915 693 aaPredicted RBP9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 MMP14P50281 582 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 NAPAP54920 295 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 ZNF280AP59817 542 aaPredicted RBP9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 ZNF543Q08ER8 600 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 TNFAIP1Q13829 316 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 SEPT2Q15019 361 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 SLC39A14Q15043 492 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 PTPAQ15257 358 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 NPY5RQ15761 445 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 KIF4BQ2VIQ3 1234 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 GPATCH4Q5T3I0 446 aaKnown RBP9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 RBM26Q5T8P6 1007 aaKnown RBP9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 PAXIP1Q6ZW49 1069 aaPredicted RBP9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 ILDR2Q71H61 639 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 METTL16Q86W50 562 aaKnown RBP9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 FOXP4Q8IVH2 680 aaPredicted RBP9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 MICALL2Q8IY33 904 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 BLIDQ8IZY5 108 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 DAGLBQ8NCG7 672 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 DCAF4Q8WV16 495 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 TNFRSF25Q93038 417 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 ZBED3Q96IU2 234 aaPredicted RBP9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 KANSL2Q9H9L4 492 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 CABP5Q9NP86 173 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 GPCPD1Q9NPB8 672 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 BARHL2Q9NY43 387 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 NYAP2Q9P242 653 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 PCDHA4Q9UN74 947 aa9.26□□□□□ -0.93
PDZRN3-212ENST00000498048 DOCK5Q9H7D0 1870 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 TRIM75PA6NK02 468 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 FZD9O00144 591 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 CUTAO60888 179 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 BMP15O95972 392 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 GH2P01242 217 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 EEF2P13639 858 aaKnown RBP9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 PFKFB1P16118 471 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 ATP2B1P20020 1258 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 SMARCA1P28370 1054 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 PRELPP51888 382 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 PLCB2Q00722 1185 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 NBPF9Q3BBW0 867 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 TTC38Q5R3I4 469 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 ADALQ6DHV7 355 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 PPP1R18Q6NYC8 613 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 PIK3AP1Q6ZUJ8 805 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 KRI1Q8N9T8 703 aaKnown RBP9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 PIGSQ96S52 555 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 PANK2Q9BZ23 570 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 FHDC1Q9C0D6 1143 aaPredicted RBP9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 TMEM39BQ9GZU3 492 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 ARHGEF10LQ9HCE6 1279 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 ZBTB21Q9ULJ3 1066 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 ARID2Q68CP9 1835 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 LRRC37A2A6NM11 1700 aa9.25□□□□□ -0.93
PDZRN3-212ENST00000498048 CCDC194A0A1B0GVG4 234 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 A0A1B0GVL5 298 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 ESYT2A0FGR8 921 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 CTAGE5O15320 804 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 CCDC192P0DO97 292 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 SLC1A4P43007 532 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 TRAPPC10P48553 1259 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 TOB1P50616 345 aaPredicted RBP9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 CAMK4Q16566 473 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 EARS2Q5JPH6 523 aaKnown RBP9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 SLFN13Q68D06 897 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 GALNT17Q6IS24 598 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 TYW1BQ6NUM6 668 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 RBM43Q6ZSC3 357 aaKnown RBP9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 KCTD1Q719H9 257 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 CDAN1Q8IWY9 1227 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 GMCL1P1Q8NEA9 526 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 RASGRP4Q8TDF6 673 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 UBA5Q9GZZ9 404 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 RBSNQ9H1K0 784 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 RIOX1Q9H6W3 641 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 PCDHB6Q9Y5E3 794 aa9.24□□□□□ -0.93
PDZRN3-212ENST00000498048 TRPM7Q96QT4 1865 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 NDUFB10O96000 172 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 XRCC6P12956 609 aaKnown RBP eCLIP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms