RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 SLC1A4P43007 532 aa20.41■□□□□ 0.86
CHRNA4-206ENST00000498043 NDUFA8P51970 172 aa20.41■□□□□ 0.86
CHRNA4-206ENST00000498043 SNW1Q13573 536 aaKnown RBP20.41■□□□□ 0.86
CHRNA4-206ENST00000498043 MAP3K11Q16584 847 aa20.41■□□□□ 0.86
CHRNA4-206ENST00000498043 ADGRF4Q8IZF3 695 aa20.41■□□□□ 0.86
CHRNA4-206ENST00000498043 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.41■□□□□ 0.86
CHRNA4-206ENST00000498043 TRIM75PA6NK02 468 aa20.4■□□□□ 0.86
CHRNA4-206ENST00000498043 TNFAIP1Q13829 316 aa20.4■□□□□ 0.86
CHRNA4-206ENST00000498043 CKAP2LQ8IYA6 745 aa20.4■□□□□ 0.86
CHRNA4-206ENST00000498043 ENGASEQ8NFI3 743 aa20.4■□□□□ 0.86
CHRNA4-206ENST00000498043 DCAF4Q8WV16 495 aa20.4■□□□□ 0.86
CHRNA4-206ENST00000498043 CLIC6Q96NY7 704 aa20.4■□□□□ 0.86
CHRNA4-206ENST00000498043 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.4■□□□□ 0.86
CHRNA4-206ENST00000498043 ZBTB21Q9ULJ3 1066 aa20.4■□□□□ 0.86
CHRNA4-206ENST00000498043 ATAD5Q96QE3 1844 aa20.4■□□□□ 0.86
CHRNA4-206ENST00000498043 KINO60870 393 aaKnown RBP20.39■□□□□ 0.86
CHRNA4-206ENST00000498043 CCDC12Q8WUD4 166 aaPredicted RBP20.39■□□□□ 0.86
CHRNA4-206ENST00000498043 JMJD4Q9H9V9 463 aa20.39■□□□□ 0.86
CHRNA4-206ENST00000498043 HACL1Q9UJ83 578 aa20.39■□□□□ 0.86
CHRNA4-206ENST00000498043 CEP131Q9UPN4 1083 aa20.39■□□□□ 0.86
CHRNA4-206ENST00000498043 MRVI1Q9Y6F6 885 aa20.39■□□□□ 0.86
CHRNA4-206ENST00000498043 F5H6K3 240 aa20.39■□□□□ 0.85
CHRNA4-206ENST00000498043 TBC1D12O60347 775 aa20.39■□□□□ 0.85
CHRNA4-206ENST00000498043 KLRC3Q07444 240 aa20.39■□□□□ 0.85
CHRNA4-206ENST00000498043 DAGLBQ8NCG7 672 aa20.39■□□□□ 0.85
CHRNA4-206ENST00000498043 NUP88Q99567 741 aaPredicted RBP20.39■□□□□ 0.85
CHRNA4-206ENST00000498043 SYT17Q9BSW7 474 aa20.39■□□□□ 0.85
CHRNA4-206ENST00000498043 A0A1W2PRG0 241 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 M0R2N6 131 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 NDUFB10O96000 172 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 PFKFB1P16118 471 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 TTC38Q5R3I4 469 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 SHC4Q6S5L8 630 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 FMR1NBQ8N0W7 255 aaPredicted RBP20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 KRI1Q8N9T8 703 aaKnown RBP20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 RNF214Q8ND24 703 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 GMCL1P1Q8NEA9 526 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 USP17L10C9JJH3 530 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 CMA1P23946 247 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 ECE1P42892 770 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 GALNT17Q6IS24 598 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 TEPSINQ96N21 525 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 FUCA2Q9BTY2 467 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 ZMYND12Q9H0C1 365 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 FBXO2Q9UK22 296 aaPredicted RBP20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 PCDHA6Q9UN73 950 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 PCDHA8Q9Y5H6 950 aa20.38■□□□□ 0.85
CHRNA4-206ENST00000498043 CCDC194A0A1B0GVG4 234 aa20.37■□□□□ 0.85
CHRNA4-206ENST00000498043 CUTAO60888 179 aa20.37■□□□□ 0.85
CHRNA4-206ENST00000498043 COA7Q96BR5 231 aa20.37■□□□□ 0.85
CHRNA4-206ENST00000498043 ARHGEF10LQ9HCE6 1279 aa20.37■□□□□ 0.85
CHRNA4-206ENST00000498043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 SMCO2A6NFE2 343 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 H7C1D1 291 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 GRIN1Q05586 938 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 ZNF174Q15697 407 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 SPICE1Q8N0Z3 855 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 FAM177A1Q8N128 213 aaPredicted RBP20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 GPC2Q8N158 579 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 TRPM4Q8TD43 1214 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 C6orf50Q9HD87 102 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 hCG_1984214I3L0E3 225 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 PPP1R11O60927 126 aaPredicted RBP20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 CAP2P40123 477 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 RBM43Q6ZSC3 357 aaKnown RBP20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 ZNF713Q8N859 430 aaPredicted RBP20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 ACER1Q8TDN7 264 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 GMCL1Q96IK5 515 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 GPRC5DQ9NZD1 345 aa20.36■□□□□ 0.85
CHRNA4-206ENST00000498043 PNMA6FA0A0J9YX94 578 aa20.35■□□□□ 0.85
CHRNA4-206ENST00000498043 YBX3P16989 372 aaKnown RBP eCLIP20.35■□□□□ 0.85
CHRNA4-206ENST00000498043 TRAPPC10P48553 1259 aa20.35■□□□□ 0.85
CHRNA4-206ENST00000498043 SPECC1Q5M775 1068 aa20.35■□□□□ 0.85
CHRNA4-206ENST00000498043 RESP18Q5W5W9 173 aa20.35■□□□□ 0.85
CHRNA4-206ENST00000498043 DEFB129Q9H1M3 183 aa20.35■□□□□ 0.85
CHRNA4-206ENST00000498043 ZBTB5O15062 677 aa20.34■□□□□ 0.85
CHRNA4-206ENST00000498043 PTPREP23469 700 aa20.34■□□□□ 0.85
CHRNA4-206ENST00000498043 GNA11P29992 359 aa20.34■□□□□ 0.85
CHRNA4-206ENST00000498043 IKQ13123 557 aaPredicted RBP20.34■□□□□ 0.85
CHRNA4-206ENST00000498043 CCDC192P0DO97 292 aa20.34■□□□□ 0.85
CHRNA4-206ENST00000498043 MCM7P33993 719 aa20.34■□□□□ 0.85
CHRNA4-206ENST00000498043 MAP3K10Q02779 954 aa20.34■□□□□ 0.85
CHRNA4-206ENST00000498043 ANGEL2Q5VTE6 544 aaKnown RBP20.34■□□□□ 0.85
CHRNA4-206ENST00000498043 CCDC84Q86UT8 332 aaPredicted RBP20.34■□□□□ 0.85
CHRNA4-206ENST00000498043 RNF181Q9P0P0 153 aa20.34■□□□□ 0.85
CHRNA4-206ENST00000498043 ESYT2A0FGR8 921 aa20.33■□□□□ 0.85
CHRNA4-206ENST00000498043 BMP3P12645 472 aa20.33■□□□□ 0.85
CHRNA4-206ENST00000498043 ZYXQ15942 572 aaKnown RBP20.33■□□□□ 0.85
CHRNA4-206ENST00000498043 INF2Q27J81 1249 aa20.33■□□□□ 0.85
CHRNA4-206ENST00000498043 REXO1Q8N1G1 1221 aaKnown RBP20.33■□□□□ 0.85
CHRNA4-206ENST00000498043 MTMR8Q96EF0 704 aa20.33■□□□□ 0.85
CHRNA4-206ENST00000498043 SYNPO2Q9UMS6 1093 aa20.33■□□□□ 0.85
CHRNA4-206ENST00000498043 HPSEQ9Y251 543 aa20.33■□□□□ 0.85
CHRNA4-206ENST00000498043 SRPRBQ9Y5M8 271 aaKnown RBP20.33■□□□□ 0.85
CHRNA4-206ENST00000498043 ZNF202O95125 648 aa20.33■□□□□ 0.84
CHRNA4-206ENST00000498043 BMP15O95972 392 aa20.33■□□□□ 0.84
CHRNA4-206ENST00000498043 SYKP43405 635 aa20.33■□□□□ 0.84
CHRNA4-206ENST00000498043 ADCY7P51828 1080 aa20.33■□□□□ 0.84
CHRNA4-206ENST00000498043 TYRO3Q06418 890 aa20.33■□□□□ 0.84
CHRNA4-206ENST00000498043 CDC37Q16543 378 aaPredicted RBP20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 253.2 ms