RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.7□□□□□ -0.38
COMMD6-212ENST00000497707 GPKOWQ92917 476 aaPredicted RBP eCLIP12.7□□□□□ -0.38
COMMD6-212ENST00000497707 VCPKMTQ9H867 229 aa12.7□□□□□ -0.38
COMMD6-212ENST00000497707 RRAGCQ9HB90 399 aa12.7□□□□□ -0.38
COMMD6-212ENST00000497707 SMCHD1A6NHR9 2005 aa12.7□□□□□ -0.38
COMMD6-212ENST00000497707 M0R2N6 131 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 GADD45BO75293 160 aaPredicted RBP12.69□□□□□ -0.38
COMMD6-212ENST00000497707 PRPF40AO75400 957 aaKnown RBP12.69□□□□□ -0.38
COMMD6-212ENST00000497707 BMP3P12645 472 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 SLC1A4P43007 532 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 TOB1P50616 345 aaPredicted RBP12.69□□□□□ -0.38
COMMD6-212ENST00000497707 AKAP17AQ02040 695 aaKnown RBP12.69□□□□□ -0.38
COMMD6-212ENST00000497707 FMR1Q06787 632 aaKnown RBP eCLIP12.69□□□□□ -0.38
COMMD6-212ENST00000497707 DGKZQ13574 1117 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 PRKG1Q13976 671 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 GPATCH4Q5T3I0 446 aaKnown RBP12.69□□□□□ -0.38
COMMD6-212ENST00000497707 MOB2Q70IA6 237 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 SULF1Q8IWU6 871 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 SPICE1Q8N0Z3 855 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 TMEM87AQ8NBN3 555 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 CDCA5Q96FF9 252 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 WDR18Q9BV38 432 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 ARHGEF10LQ9HCE6 1279 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 EMILIN3Q9NT22 766 aa12.69□□□□□ -0.38
COMMD6-212ENST00000497707 IQCA1LA6NCM1 817 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 SNAP25P60880 206 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 NR5A1Q13285 461 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 CCDC96Q2M329 555 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 EAPPQ56P03 285 aaPredicted RBP12.68□□□□□ -0.38
COMMD6-212ENST00000497707 DIS3L2Q8IYB7 885 aaKnown RBP12.68□□□□□ -0.38
COMMD6-212ENST00000497707 HOOK2Q96ED9 719 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 USP28Q96RU2 1077 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 WRNIP1Q96S55 665 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 FTOQ9C0B1 505 aaKnown RBP eCLIP12.68□□□□□ -0.38
COMMD6-212ENST00000497707 SH3GLB2Q9NR46 395 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 BARHL2Q9NY43 387 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 RBM27Q9P2N5 1060 aaKnown RBP12.68□□□□□ -0.38
COMMD6-212ENST00000497707 RCOR1Q9UKL0 485 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 SNCAIPQ9Y6H5 919 aa12.68□□□□□ -0.38
COMMD6-212ENST00000497707 OTOFQ9HC10 1997 aa12.67□□□□□ -0.38
COMMD6-212ENST00000497707 TMEM232C9JQI7 657 aa12.67□□□□□ -0.38
COMMD6-212ENST00000497707 ZYXQ15942 572 aaKnown RBP12.67□□□□□ -0.38
COMMD6-212ENST00000497707 MAP3K11Q16584 847 aa12.67□□□□□ -0.38
COMMD6-212ENST00000497707 FAM83BQ5T0W9 1011 aa12.67□□□□□ -0.38
COMMD6-212ENST00000497707 MYSM1Q5VVJ2 828 aa12.67□□□□□ -0.38
COMMD6-212ENST00000497707 PNMA8AQ86V59 439 aaPredicted RBP12.67□□□□□ -0.38
COMMD6-212ENST00000497707 COA7Q96BR5 231 aa12.67□□□□□ -0.38
COMMD6-212ENST00000497707 RRP36Q96EU6 259 aaKnown RBP12.67□□□□□ -0.38
COMMD6-212ENST00000497707 KIAA1683Q9H0B3 1180 aa12.67□□□□□ -0.38
COMMD6-212ENST00000497707 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
COMMD6-212ENST00000497707 AFG3L2Q9Y4W6 797 aa12.67□□□□□ -0.38
COMMD6-212ENST00000497707 ATP6V1DQ9Y5K8 247 aa12.67□□□□□ -0.38
COMMD6-212ENST00000497707 CLIC4Q9Y696 253 aa12.67□□□□□ -0.38
COMMD6-212ENST00000497707 PNMA6FA0A0J9YX94 578 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 WNT7AO00755 349 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 EDIL3O43854 480 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 RAD21O60216 631 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 PLA2G6O60733 806 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 SPP2Q13103 211 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 TRIM29Q14134 588 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 MAP1SQ66K74 1059 aaPredicted RBP12.66□□□□□ -0.38
COMMD6-212ENST00000497707 BRAPQ7Z569 592 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 HOMER1Q86YM7 354 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 GPT2Q8TD30 523 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
COMMD6-212ENST00000497707 PGBD1Q96JS3 809 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 GOPCQ9HD26 462 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 NMRK2Q9NPI5 230 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 PRR12Q9ULL5 1215 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 ZHX2Q9Y6X8 837 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 RLFQ13129 1914 aa12.66□□□□□ -0.38
COMMD6-212ENST00000497707 DDX11L8A8MPP1 907 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 TRAF5O00463 557 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 ZBTB5O15062 677 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 TRAK2O60296 914 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 BACE1P56817 501 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 NLRP5P59047 1200 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 KRT85P78386 507 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 VGLL4Q14135 290 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 PTPAQ15257 358 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 QRICH1Q2TAL8 776 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 SYDE2Q5VT97 1194 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 HEATR3Q7Z4Q2 680 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 NOSTRINQ8IVI9 506 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 DAGLBQ8NCG7 672 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 CLMNQ96JQ2 1002 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 ZMYND12Q9H0C1 365 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 FBXO28Q9NVF7 368 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 RTEL1Q9NZ71 1219 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 PCDHA6Q9UN73 950 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 PCDHA4Q9UN74 947 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 PCDHA8Q9Y5H6 950 aa12.65□□□□□ -0.38
COMMD6-212ENST00000497707 PARP14Q460N5 1801 aa12.65□□□□□ -0.39
COMMD6-212ENST00000497707 SMCO2A6NFE2 343 aa12.64□□□□□ -0.39
COMMD6-212ENST00000497707 FIBPO43427 364 aa12.64□□□□□ -0.39
COMMD6-212ENST00000497707 TAL1P17542 331 aaPredicted RBP12.64□□□□□ -0.39
COMMD6-212ENST00000497707 KRT2P35908 639 aa12.64□□□□□ -0.39
COMMD6-212ENST00000497707 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms