RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	EXOSC10	Q01780	885 aa	Known RBP	9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	PRKCZ	Q05513	592 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	TROAP	Q12815	778 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	KRT32	Q14532	448 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	KIF22	Q14807	665 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	BTNL9	Q6UXG8	535 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	FAM160B2	Q86V87	743 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	STAG2	Q8N3U4	1231 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	TMEM87B	Q96K49	555 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	JAKMIP1	Q96N16	626 aa	Known RBP	9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	MTA3	Q9BTC8	594 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	MYL10	Q9BUA6	226 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	SLC38A10	Q9HBR0	1119 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	SRRD	Q9UH36	339 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	PRR12	Q9ULL5	1215 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	PTPN22	Q9Y2R2	807 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	PTCH2	Q9Y6C5	1203 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	LCT	P09848	1927 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	WDR19	Q8NEZ3	1342 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	ERCC3	P19447	782 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	IK	Q13123	557 aa	Predicted RBP	9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	PLS1	Q14651	629 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	GRM4	Q14833	912 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	SART3	Q15020	963 aa	Known RBP	9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	SLC35G1	Q2M3R5	365 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	ASPRV1	Q53RT3	343 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	GPATCH4	Q5T3I0	446 aa	Known RBP	9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	SYDE2	Q5VT97	1194 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	FBXO46	Q6PJ61	603 aa	Predicted RBP	9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	DHX32	Q7L7V1	743 aa	Known RBP	9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	GPR142	Q7Z601	462 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	RAB11FIP4	Q86YS3	637 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	RIOX2	Q8IUF8	465 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	ZNF654	Q8IZM8	581 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	CPXCR1	Q8N123	301 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	CHURC1	Q8WUH1	139 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	RANBP17	Q9H2T7	1088 aa	Known RBP	9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	RAVER2	Q9HCJ3	691 aa	Known RBP	9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	MAD2L2	Q9UI95	211 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	GJD2	Q9UKL4	321 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	RIPK3	Q9Y572	518 aa		9.41	□□□□□ -0.9
EFNA1-205	ENST00000497282	PLXNA1	Q9UIW2	1896 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	SMCHD1	A6NHR9	2005 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	PALM3	A6NDB9	673 aa	Predicted RBP	9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	ATP2A1	O14983	1001 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	GNRH1	P01148	92 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	PARP1	P09874	1014 aa	Known RBP	9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	RXRA	P19793	462 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	CAST	P20810	708 aa	Known RBP	9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	RPS6KB1	P23443	525 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	MAPK4	P31152	587 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	LIFR	P42702	1097 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	FLT3LG	P49771	235 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	CCNA1	P78396	465 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	SNRNP48	Q6IEG0	339 aa	Known RBP	9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	BLOC1S2	Q6QNY1	142 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	PLEKHH3	Q7Z736	793 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	SGMS1	Q86VZ5	419 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	TNS4	Q8IZW8	715 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	SHCBP1	Q8NEM2	672 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	TEX13B	Q9BXU2	312 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	UBA5	Q9GZZ9	404 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	BRPF3	Q9ULD4	1205 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	MYH6	P13533	1939 aa		9.4	□□□□□ -0.9
EFNA1-205	ENST00000497282	CCDC69	A6NI79	296 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	KLRF2	D3W0D1	207 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	CYTH3	O43739	400 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	ZBED4	O75132	1171 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	DDAH1	O94760	285 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	HMGB1	P09429	215 aa	Known RBP	9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	PTPRE	P23469	700 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	STAT3	P40763	770 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	OAZ1	P54368	228 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	GRB14	Q14449	540 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	PKN2	Q16513	984 aa	Known RBP	9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	MORN1	Q5T089	497 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	WDR78	Q5VTH9	848 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	CCDC174	Q6PII3	467 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	APOA5	Q6Q788	366 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	NBPF11	Q86T75	865 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	NCAPG2	Q86XI2	1143 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	ADGRF4	Q8IZF3	695 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	NUP133	Q8WUM0	1156 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	USP6NL	Q92738	828 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	COA7	Q96BR5	231 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	IL17RA	Q96F46	866 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	AGBL1	Q96MI9	1066 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	AGXT2	Q9BYV1	514 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	UPF3B	Q9BZI7	483 aa	Known RBP	9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	ZSWIM6	Q9HCJ5	1215 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	HPS5	Q9UPZ3	1129 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	LRRC37A2	A6NM11	1700 aa		9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	ZNFX1	Q9P2E3	1918 aa	Known RBP	9.39	□□□□□ -0.91
EFNA1-205	ENST00000497282	PLEKHA8P1	O95397	391 aa		9.38	□□□□□ -0.91
EFNA1-205	ENST00000497282	SLC25A27	O95847	323 aa		9.38	□□□□□ -0.91
EFNA1-205	ENST00000497282	ICAM1	P05362	532 aa		9.38	□□□□□ -0.91
EFNA1-205	ENST00000497282	FDX1	P10109	184 aa		9.38	□□□□□ -0.91
EFNA1-205	ENST00000497282	ELN	P15502	786 aa		9.38	□□□□□ -0.91
EFNA1-205	ENST00000497282	PSMA5	P28066	241 aa		9.38	□□□□□ -0.91
EFNA1-205	ENST00000497282	HOXD10	P28358	340 aa		9.38	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms